MGE detailed information
MGE type: IS/Tn MGE length: 351 bp
Accession: NZ_CP067398 Location: 25308..25658 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain LB5000 Replicon: plasmid psLT
Accession: NZ_CP067398 Location: 25308..25658 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain LB5000 Replicon: plasmid psLT
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJB81_RS23260 (JJB81_23255) | 20315..20620 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| JJB81_RS23265 (JJB81_23260) | 20622..20912 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| JJB81_RS23270 (JJB81_23265) | 20909..21430 | + | 522 | WP_000198608.1 | hypothetical protein | - |
| JJB81_RS23275 (JJB81_23270) | 21465..22247 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| JJB81_RS23280 (JJB81_23275) | 22256..22807 | + | 552 | WP_000545754.1 | EAL domain-containing protein | - |
| JJB81_RS23285 (JJB81_23280) | 22994..23482 | + | 489 | WP_001075507.1 | CaiF/GrlA family transcriptional regulator | - |
| JJB81_RS23290 (JJB81_23285) | 23476..23961 | + | 486 | WP_000905606.1 | membrane protein | - |
| JJB81_RS23295 (JJB81_23290) | 24238..24525 | - | 288 | WP_071530243.1 | hypothetical protein | - |
| JJB81_RS23300 (JJB81_23295) | 24681..25241 | + | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| JJB81_RS23305 (JJB81_23300) | 25308..25658 | - | 351 | WP_001541541.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| JJB81_RS23310 (JJB81_23305) | 25715..26139 | + | 425 | Protein_37 | IS200/IS605 family transposase | - |
| JJB81_RS23315 (JJB81_23310) | 26266..26916 | - | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| JJB81_RS23320 (JJB81_23315) | 27177..27902 | - | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| JJB81_RS23325 (JJB81_23320) | 28184..29959 | - | 1776 | WP_210138969.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| JJB81_RS23330 (JJB81_23325) | 30011..30178 | - | 168 | WP_001526987.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|