MGE detailed information
MGE type: Genomic_island MGE length: 35158 bp
Accession: NZ_CP067397 Location: 316095..351252 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain LB5000 Replicon: chromosome
Accession: NZ_CP067397 Location: 316095..351252 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain LB5000 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJB81_RS01370 () | 311096..313735 | + | 2640 | WP_000449778.1 | type VI secretion system ATPase TssH | - |
| JJB81_RS01375 () | 313835..314377 | + | 543 | WP_000996817.1 | type VI secretion system contractile sheath small subunit | - |
| JJB81_RS01380 () | 314401..315909 | + | 1509 | WP_000013881.1 | type VI secretion system contractile sheath large subunit | - |
| JJB81_RS01385 () | 315924..316082 | + | 159 | WP_001584850.1 | BPSL0067 family protein | - |
| JJB81_RS01390 () | 316209..316541 | + | 333 | WP_014344502.1 | hypothetical protein | - |
| JJB81_RS01395 () | 316795..317280 | + | 486 | WP_000312802.1 | Protein hcp1 | VF |
| JJB81_RS23700 () | 317348..317542 | + | 195 | Protein_271 | type VI secretion system lipoprotein TssJ | - |
| JJB81_RS01405 () | 317585..318070 | + | 486 | WP_001081550.1 | T6SS effector amidase Tae4 family protein | - |
| JJB81_RS01410 () | 318055..318438 | + | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| JJB81_RS01415 () | 318581..319066 | + | 486 | WP_000119443.1 | Protein hcp1 | VF |
| JJB81_RS01420 () | 319133..319669 | + | 537 | WP_001007106.1 | hypothetical protein | VF |
| JJB81_RS01425 () | 319673..321016 | + | 1344 | WP_000118732.1 | hypothetical protein | VF |
| JJB81_RS01430 () | 321013..322317 | + | 1305 | WP_000132483.1 | Outer membrane porin F | VF |
| JJB81_RS01435 () | 322322..323095 | + | 774 | WP_000976553.1 | Rap1a/Tai family immunity protein | - |
| JJB81_RS01440 () | 323298..323729 | + | 432 | WP_000227044.1 | Shiga toxin A subunit | - |
| JJB81_RS01445 () | 323763..327632 | + | 3870 | WP_001168955.1 | hypothetical protein | VF |
| JJB81_RS01450 () | 327632..328420 | + | 789 | WP_001254137.1 | TagF domain-containing protein | - |
| JJB81_RS01455 () | 328417..328833 | + | 417 | WP_001596567.1 | DUF2195 family protein | - |
| JJB81_RS01460 () | 328857..329378 | + | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| JJB81_RS01465 () | 329775..331964 | + | 2190 | WP_000011534.1 | Actin cross-linking toxin VgrG1 | VF |
| JJB81_RS01470 () | 331988..332434 | + | 447 | WP_000375832.1 | DcrB-related protein | - |
| JJB81_RS01475 () | 332453..336547 | + | 4095 | WP_210138907.1 | RHS repeat-associated core domain-containing protein | - |
| JJB81_RS01480 () | 336541..336804 | + | 264 | WP_000932531.1 | hypothetical protein | - |
| JJB81_RS01485 () | 336868..337737 | + | 870 | Protein_288 | Protein RhsC | VF |
| JJB81_RS01490 () | 337731..338177 | + | 447 | WP_000935097.1 | protein SciX | - |
| JJB81_RS01495 () | 338740..339177 | + | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| JJB81_RS01500 () | 339230..339505 | - | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| - | 339240..339662 | + | 423 | - | - | Antitoxin Detail |
| JJB81_RS23705 () | 339690..339863 | + | 174 | WP_088131292.1 | RHS repeat-associated core domain-containing protein | - |
| JJB81_RS01510 () | 339946..340254 | + | 309 | WP_010988969.1 | hypothetical protein | - |
| JJB81_RS01515 () | 340356..340604 | - | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| JJB81_RS01520 () | 340657..341361 | + | 705 | Protein_295 | integrase core domain-containing protein | - |
| JJB81_RS01525 () | 342111..342623 | + | 513 | WP_010988970.1 | Saf-pilin pilus formation protein SafA | - |
| JJB81_RS01530 () | 342707..343444 | + | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| JJB81_RS01535 () | 343468..345978 | + | 2511 | WP_210138908.1 | F1 capsule-anchoring protein | VF |
| JJB81_RS01540 () | 346000..346470 | + | 471 | Protein_299 | Protein AfaD | VF |
| JJB81_RS01545 () | 346876..347697 | + | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| JJB81_RS01550 () | 347780..348020 | + | 241 | Protein_301 | PerC family transcriptional regulator | - |
| JJB81_RS01555 () | 348512..349459 | + | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| JJB81_RS01560 () | 349576..349791 | + | 216 | WP_001575654.1 | hypothetical protein | - |
| JJB81_RS01565 () | 349795..350514 | - | 720 | WP_000787603.1 | Outer membrane protein PagN | VF |
| JJB81_RS01570 () | 350845..351252 | - | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| JJB81_RS01575 () | 351623..352390 | - | 768 | WP_000015789.1 | amidohydrolase | - |
| JJB81_RS01580 () | 352499..354943 | - | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| JJB81_RS01585 () | 355183..355761 | + | 579 | WP_000284051.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|