MGE detailed information
MGE type: Genomic_island MGE length: 42956 bp
Accession: NZ_CP067369 Location: 3384199..3427154 Organism: Salmonella bongori strain Se40 Replicon: chromosome
Accession: NZ_CP067369 Location: 3384199..3427154 Organism: Salmonella bongori strain Se40 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JG560_RS16040 () | 3379232..3382408 | + | 3177 | WP_000673165.1 | multidrug efflux RND transporter permease subunit MdsB | - |
| JG560_RS16045 () | 3382425..3383882 | + | 1458 | WP_000691230.1 | efflux transporter outer membrane subunit | - |
| JG560_RS16050 () | 3384199..3384543 | - | 345 | WP_000651477.1 | hypothetical protein | - |
| JG560_RS16055 () | 3384722..3385429 | - | 708 | WP_141024918.1 | hypothetical protein | - |
| JG560_RS16060 () | 3385416..3385898 | - | 483 | WP_001015732.1 | CaiF/GrlA family transcriptional regulator | - |
| JG560_RS16065 () | 3385977..3386411 | - | 435 | WP_001286315.1 | hypothetical protein | - |
| JG560_RS16070 () | 3386924..3387514 | + | 591 | WP_000646707.1 | fimbrial protein | - |
| JG560_RS16075 () | 3387593..3390064 | + | 2472 | WP_000023711.1 | Outer membrane usher protein PapC | VF |
| JG560_RS16080 () | 3390101..3390811 | + | 711 | WP_000961304.1 | Chaperone protein PapD | VF |
| JG560_RS16085 () | 3390844..3391800 | + | 957 | WP_000621807.1 | fimbrial protein | - |
| JG560_RS16090 () | 3392617..3393438 | - | 822 | WP_013991373.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| JG560_RS16095 () | 3393451..3394479 | - | 1029 | WP_013991372.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| JG560_RS16100 () | 3394463..3395992 | - | 1530 | WP_000642131.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| JG560_RS16105 () | 3395989..3396471 | - | 483 | WP_001169431.1 | hypothetical protein | - |
| JG560_RS16110 () | 3396459..3397286 | - | 828 | WP_000662269.1 | hypothetical protein | - |
| JG560_RS16115 () | 3397292..3397861 | - | 570 | WP_000647409.1 | hypothetical protein | - |
| JG560_RS16120 () | 3397863..3399311 | - | 1449 | WP_000768340.1 | hypothetical protein | - |
| JG560_RS16125 () | 3399331..3399591 | - | 261 | WP_115400796.1 | TcpQ domain-containing protein | - |
| JG560_RS16130 () | 3399875..3401473 | - | 1599 | WP_000680636.1 | hypothetical protein | - |
| JG560_RS16135 () | 3401560..3402294 | - | 735 | WP_141024919.1 | Toxin coregulated pilin | VF |
| JG560_RS16140 () | 3402363..3402815 | - | 453 | WP_043942408.1 | hypothetical protein | VF |
| JG560_RS16145 () | 3402848..3403711 | - | 864 | WP_000353269.1 | hypothetical protein | - |
| JG560_RS16150 () | 3404674..3405993 | + | 1320 | WP_001218450.1 | Prophage integrase IntA ; Integrase | Integrase |
| JG560_RS16155 () | 3406031..3407083 | - | 1053 | WP_000575274.1 | macro domain-containing protein | - |
| JG560_RS16160 () | 3407097..3407744 | - | 648 | WP_000026701.1 | DUF4433 domain-containing protein | - |
| JG560_RS16165 () | 3407845..3408678 | - | 834 | WP_001192753.1 | DUF4942 domain-containing protein | - |
| JG560_RS16170 () | 3408794..3409135 | - | 342 | WP_001194750.1 | TA system toxin CbtA family protein | Toxin Detail |
| JG560_RS16175 () | 3409179..3409520 | - | 342 | WP_000380487.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JG560_RS16180 () | 3409543..3409764 | - | 222 | WP_000691988.1 | DUF987 family protein | - |
| JG560_RS16185 () | 3409761..3410261 | - | 501 | WP_001090292.1 | DNA repair protein RadC | - |
| JG560_RS16190 () | 3410274..3411092 | - | 819 | WP_001234407.1 | DUF945 domain-containing protein | - |
| JG560_RS16195 () | 3411194..3411439 | - | 246 | WP_000082136.1 | DUF905 domain-containing protein | - |
| JG560_RS16200 () | 3411514..3412428 | - | 915 | WP_000797249.1 | hypothetical protein | - |
| JG560_RS16205 () | 3412493..3412696 | - | 204 | WP_000508162.1 | hypothetical protein | - |
| JG560_RS16210 () | 3412713..3412859 | - | 147 | WP_023892166.1 | hypothetical protein | - |
| JG560_RS16215 () | 3412932..3413646 | - | 715 | Protein_3168 | WYL domain-containing protein | - |
| JG560_RS16220 () | 3413999..3414304 | - | 306 | WP_000227087.1 | hypothetical protein | - |
| JG560_RS16225 () | 3414672..3415790 | + | 1119 | WP_000833601.1 | hypothetical protein | - |
| JG560_RS16230 () | 3415936..3416223 | + | 288 | WP_000788133.1 | hypothetical protein | - |
| JG560_RS16235 () | 3416375..3419482 | - | 3108 | WP_000194036.1 | type I restriction endonuclease subunit R | - |
| JG560_RS16240 () | 3419612..3420832 | - | 1221 | WP_000016245.1 | restriction endonuclease subunit S | - |
| JG560_RS16245 () | 3420829..3422385 | - | 1557 | WP_000202810.1 | type I restriction-modification system subunit M | - |
| JG560_RS16250 () | 3422950..3423570 | - | 621 | WP_000861012.1 | inovirus Gp2 family protein | - |
| JG560_RS16255 () | 3423817..3425310 | - | 1494 | WP_000923662.1 | DUF3987 domain-containing protein | - |
| JG560_RS16260 () | 3425447..3425683 | - | 237 | WP_013991366.1 | AlpA family phage regulatory protein | - |
| JG560_RS16265 () | 3426051..3427154 | - | 1104 | WP_000371010.1 | hypothetical protein | - |
| JG560_RS16275 () | 3427926..3429176 | - | 1251 | WP_000893244.1 | glutamate-5-semialdehyde dehydrogenase | - |
| JG560_RS16280 () | 3429188..3430291 | - | 1104 | WP_001285272.1 | glutamate 5-kinase | - |
| JG560_RS16285 () | 3430730..3431131 | - | 402 | WP_000174691.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|