MGE detailed information
MGE type: Genomic_island MGE length: 66452 bp
Accession: NZ_CP067342 Location: 4307486..4373937 Organism: Escherichia coli strain ECJXMCRH7 Replicon: chromosome
Accession: NZ_CP067342 Location: 4307486..4373937 Organism: Escherichia coli strain ECJXMCRH7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJB06_RS21180 (4302857) | 4302857..4304041 | + | 1185 | WP_001218742.1 | tyrosine-type recombinase/integrase | - |
| JJB06_RS21185 (4304191) | 4304191..4305201 | + | 1011 | WP_000053331.1 | substrate-binding domain-containing protein | - |
| JJB06_RS21190 (4305297) | 4305297..4307423 | + | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| JJB06_RS21195 (4307486) | 4307486..4308763 | + | 1278 | WP_001083368.1 | MFS transporter | - |
| JJB06_RS21200 (4308760) | 4308760..4310193 | + | 1434 | WP_024144973.1 | glycoside hydrolase family 32 protein | - |
| JJB06_RS21205 (4310388) | 4310388..4311782 | + | 1395 | WP_001037798.1 | carbohydrate porin | - |
| JJB06_RS21210 (4311856) | 4311856..4312044 | + | 189 | WP_023154806.1 | hypothetical protein | - |
| JJB06_RS21215 (4312360) | 4312360..4312647 | - | 288 | Protein_4163 | IS3 family transposase IS2 | Transposase |
| JJB06_RS21220 (4312636) | 4312636..4312997 | - | 362 | Protein_4164 | IS1-like element IS1A family transposase | - |
| JJB06_RS21225 (4313047) | 4313047..4314081 | + | 1035 | WP_032153697.1 | tetratricopeptide repeat family protein | - |
| JJB06_RS21230 (4314225) | 4314225..4315898 | - | 1674 | WP_025492097.1 | sulfatase-like hydrolase/transferase | - |
| JJB06_RS21235 (4315951) | 4315951..4316148 | - | 198 | WP_001238004.1 | hypothetical protein | - |
| JJB06_RS21240 (4316288) | 4316288..4316554 | - | 267 | WP_000766274.1 | YkgJ family cysteine cluster protein | - |
| JJB06_RS21245 (4316551) | 4316551..4318122 | - | 1572 | WP_001100182.1 | ATP--cob(I)alamin adenosyltransferase | - |
| JJB06_RS21250 (4318169) | 4318169..4319248 | - | 1080 | WP_001207396.1 | hypothetical protein | - |
| JJB06_RS21255 (4319297) | 4319297..4320100 | - | 804 | WP_226194615.1 | WYL domain-containing protein | - |
| JJB06_RS21260 (4320345) | 4320345..4321607 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| JJB06_RS21265 (4321742) | 4321742..4322950 | + | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| JJB06_RS21270 (4323195) | 4323195..4324070 | + | 876 | WP_001617865.1 | hypothetical protein | ARG |
| JJB06_RS21275 (4324105) | 4324105..4324740 | + | 636 | Protein_4175 | IS5 family transposase IS903B | Transposase |
| JJB06_RS21280 (4325402) | 4325402..4326139 | - | 738 | WP_219360884.1 | OmpW family outer membrane protein | - |
| JJB06_RS21285 (4326458) | 4326458..4326931 | + | 474 | WP_000335224.1 | H-NS family nucleoid-associated regulatory protein | - |
| JJB06_RS21290 (4327483) | 4327483..4328490 | - | 1008 | WP_001232703.1 | LacI family DNA-binding transcriptional regulator | - |
| JJB06_RS21295 (4328516) | 4328516..4329925 | - | 1410 | WP_023181052.1 | sucrose-6-phosphate hydrolase | - |
| JJB06_RS21300 (4329925) | 4329925..4331295 | - | 1371 | WP_000344909.1 | sucrose-specific PTS transporter subunit IIBC | - |
| JJB06_RS21305 (4331356) | 4331356..4332873 | - | 1518 | WP_000277208.1 | carbohydrate porin | - |
| JJB06_RS21310 (4333041) | 4333041..4333961 | - | 921 | WP_000107666.1 | aminoimidazole riboside kinase | - |
| JJB06_RS25055 (4334186) | 4334186..4334317 | + | 132 | WP_000572531.1 | hypothetical protein | - |
| JJB06_RS21315 (4334681) | 4334681..4334782 | + | 102 | Protein_4184 | transposase domain-containing protein | - |
| JJB06_RS21320 (4334894) | 4334894..4335556 | - | 663 | WP_000836532.1 | PAS domain-containing protein | - |
| JJB06_RS21325 (4335781) | 4335781..4336989 | - | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| JJB06_RS21330 (4337080) | 4337080..4338039 | + | 960 | WP_219360912.1 | sugar phosphate isomerase/epimerase family protein | - |
| JJB06_RS21335 (4338061) | 4338061..4338438 | + | 378 | WP_001389183.1 | RidA family protein | - |
| JJB06_RS21340 (4338453) | 4338453..4339685 | + | 1233 | WP_001389184.1 | MFS transporter | - |
| JJB06_RS21345 (4339950) | 4339950..4340675 | - | 726 | Protein_4190 | IS66 family transposase ISEc23 | Transposase |
| JJB06_RS21350 (4340706) | 4340706..4341056 | - | 351 | WP_000624710.1 | IS66 family transposase ISEc47 | Transposase |
| JJB06_RS21355 (4341053) | 4341053..4341472 | - | 420 | WP_000422706.1 | IS66 family transposase ISEc23 | Transposase |
| JJB06_RS21360 (4341729) | 4341729..4342371 | - | 643 | Protein_4193 | IS3 family transposase IS2 | Transposase |
| JJB06_RS21365 (4342559) | 4342559..4342888 | + | 330 | WP_000042910.1 | IS66 family transposase ISEc49 | Transposase |
| JJB06_RS21370 (4342875) | 4342875..4343267 | + | 393 | WP_000950652.1 | IS66 family transposase ISEc49 | Transposase |
| JJB06_RS21375 (4343274) | 4343274..4344148 | + | 875 | Protein_4196 | IS66 family transposase ISEc49 | Transposase |
| JJB06_RS21380 (4344144) | 4344144..4344953 | - | 810 | Protein_4197 | hypothetical protein | VF |
| JJB06_RS21385 (4344917) | 4344917..4346596 | - | 1680 | Protein_4198 | hypothetical protein | VF |
| JJB06_RS21390 (4346589) | 4346589..4346759 | - | 171 | Protein_4199 | hypothetical protein | - |
| JJB06_RS21395 (4346848) | 4346848..4347348 | - | 501 | WP_001167446.1 | hypothetical protein | - |
| JJB06_RS21400 (4347348) | 4347348..4347587 | - | 240 | WP_000335228.1 | hypothetical protein | - |
| JJB06_RS21405 (4347616) | 4347616..4347846 | - | 231 | WP_001389194.1 | AlpA family transcriptional regulator | - |
| JJB06_RS21410 (4347915) | 4347915..4348475 | - | 561 | WP_000991581.1 | hypothetical protein | - |
| JJB06_RS21415 (4348733) | 4348733..4349299 | - | 567 | WP_001126801.1 | inovirus-type Gp2 protein | - |
| JJB06_RS25060 (4351243) | 4351243..4351581 | + | 339 | WP_000888269.1 | hypothetical protein | VF |
| JJB06_RS21425 (4352005) | 4352005..4352736 | - | 732 | WP_219360885.1 | inovirus Gp2 family protein | - |
| JJB06_RS21430 (4354487) | 4354487..4355296 | + | 810 | WP_023155731.1 | hypothetical protein | - |
| JJB06_RS21435 (4355293) | 4355293..4356225 | - | 933 | WP_023155730.1 | hypothetical protein | - |
| JJB06_RS21440 (4356332) | 4356332..4357216 | + | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| JJB06_RS21445 (4357335) | 4357335..4358012 | + | 678 | WP_023155728.1 | hypothetical protein | - |
| JJB06_RS21450 (4358042) | 4358042..4358251 | + | 210 | WP_023155727.1 | DUF905 family protein | - |
| JJB06_RS21455 (4358342) | 4358342..4359160 | + | 819 | WP_001234693.1 | DUF932 domain-containing protein | - |
| JJB06_RS21460 (4359252) | 4359252..4359737 | + | 486 | WP_032153711.1 | antirestriction protein | - |
| JJB06_RS21465 (4359753) | 4359753..4360229 | + | 477 | WP_001186715.1 | RadC family protein | - |
| JJB06_RS21470 (4360298) | 4360298..4360519 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| JJB06_RS21475 (4360599) | 4360599..4360973 | + | 375 | WP_032153712.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| JJB06_RS21480 (4361020) | 4361020..4361397 | + | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| JJB06_RS21485 (4361394) | 4361394..4361885 | + | 492 | WP_023155722.1 | DUF5983 family protein | - |
| JJB06_RS21490 (4361897) | 4361897..4362094 | + | 198 | WP_000839265.1 | DUF957 domain-containing protein | - |
| JJB06_RS21495 (4362179) | 4362179..4363045 | + | 867 | WP_032153714.1 | DUF4942 domain-containing protein | - |
| JJB06_RS21500 (4363117) | 4363117..4363380 | + | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| JJB06_RS21505 (4363377) | 4363377..4363703 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JJB06_RS21510 (4364586) | 4364586..4366124 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| JJB06_RS21515 (4366490) | 4366490..4367824 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| JJB06_RS21520 (4367904) | 4367904..4370051 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| JJB06_RS21525 (4370110) | 4370110..4371567 | + | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| JJB06_RS21530 (4371804) | 4371804..4373321 | + | 1518 | WP_001295090.1 | lysine--tRNA ligase | - |
| JJB06_RS21535 (4373440) | 4373440..4373613 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| JJB06_RS21540 (4373641) | 4373641..4373937 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| JJB06_RS21545 (4374164) | 4374164..4374436 | - | 273 | WP_000405651.1 | GNAT family N-acetyltransferase | - |
| JJB06_RS21550 (4374448) | 4374448..4374678 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| JJB06_RS21555 (4374859) | 4374859..4376490 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| JJB06_RS21560 (4376487) | 4376487..4377206 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|