MGE detailed information
MGE type: Genomic_island MGE length: 33485 bp
Accession: NZ_CP067250 Location: 906945..940429 Organism: Escherichia coli strain ESBL_DR28 Replicon: chromosome
Accession: NZ_CP067250 Location: 906945..940429 Organism: Escherichia coli strain ESBL_DR28 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJB16_RS04230 (906122) | 906122..906514 | + | 393 | WP_001101839.1 | hypothetical protein | - |
| JJB16_RS04235 (906945) | 906945..908081 | + | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| JJB16_RS04240 (908122) | 908122..908892 | - | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| JJB16_RS04245 (909073) | 909073..909519 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| JJB16_RS04250 (909562) | 909562..912006 | - | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| JJB16_RS04255 (912246) | 912246..912824 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| JJB16_RS04260 (913030) | 913030..913797 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| JJB16_RS04265 (913768) | 913768..914508 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| JJB16_RS04270 (914664) | 914664..914942 | - | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| JJB16_RS04275 (914945) | 914945..915205 | - | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| JJB16_RS04280 (915415) | 915415..916164 | + | 750 | WP_000056849.1 | Murein DD-endopeptidase MepH | VF |
| JJB16_RS04285 (916340) | 916340..916837 | + | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| JJB16_RS04290 (917061) | 917061..918773 | - | 1713 | Protein_842 | Flagellar biosynthesis protein FlhA | VF |
| JJB16_RS04295 (918745) | 918745..919530 | + | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| JJB16_RS04300 (919601) | 919601..920656 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| JJB16_RS04305 (920708) | 920708..921001 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| JJB16_RS04310 (921004) | 921004..921402 | + | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| JJB16_RS04315 (921412) | 921412..921864 | + | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| JJB16_RS04320 (922182) | 922182..922388 | + | 207 | Protein_848 | RtcB family protein | - |
| JJB16_RS04325 (922384) | 922384..922905 | + | 522 | Protein_849 | peptide chain release factor H | - |
| JJB16_RS04330 (922962) | 922962..924419 | - | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| JJB16_RS04335 (924680) | 924680..925138 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| - (925734) | 925734..925814 | + | 81 | NuclAT_13 | - | - |
| - (925734) | 925734..925814 | + | 81 | NuclAT_13 | - | - |
| - (925734) | 925734..925814 | + | 81 | NuclAT_13 | - | - |
| - (925734) | 925734..925814 | + | 81 | NuclAT_13 | - | - |
| JJB16_RS04340 (925230) | 925230..926474 | + | 1245 | WP_000189532.1 | esterase FrsA | - |
| JJB16_RS04345 (926532) | 926532..926933 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| JJB16_RS04350 (926972) | 926972..928027 | - | 1056 | WP_000749867.1 | phosphoporin PhoE | - |
| JJB16_RS04355 (928315) | 928315..929418 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| JJB16_RS04360 (929430) | 929430..930683 | + | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| JJB16_RS04370 (931199) | 931199..931780 | + | 582 | WP_001310565.1 | hypothetical protein | - |
| JJB16_RS04375 (931867) | 931867..933498 | - | 1632 | WP_001310566.1 | hypothetical protein | - |
| JJB16_RS04380 (934191) | 934191..934418 | + | 228 | WP_000270169.1 | AlpA family phage regulatory protein | - |
| JJB16_RS24125 (934630) | 934630..934779 | + | 150 | WP_001333414.1 | DUF3987 domain-containing protein | - |
| JJB16_RS04390 (934992) | 934992..936425 | + | 1434 | WP_042047126.1 | YfjI family protein | - |
| JJB16_RS04395 (937284) | 937284..937847 | + | 564 | WP_000282099.1 | inovirus-type Gp2 protein | - |
| JJB16_RS04400 (938173) | 938173..939507 | - | 1335 | Protein_863 | Group II intron-encoded protein LtrA | VF |
| JJB16_RS04405 (940001) | 940001..940120 | - | 120 | Protein_864 | IS481 family transposase ISKpn28 | Transposase |
| JJB16_RS04410 (940199) | 940199..940429 | - | 231 | Protein_865 | IS4 family transposase ISSfl1 | Transposase |
| JJB16_RS04415 (940573) | 940573..941682 | - | 1110 | WP_016243364.1 | sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC | - |
| JJB16_RS04420 (942039) | 942039..943271 | + | 1233 | WP_000742442.1 | maltodextrin ABC transporter substrate-binding protein | - |
| JJB16_RS04425 (943334) | 943334..944641 | + | 1308 | WP_000022200.1 | sugar ABC transporter permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|