MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 53553 bp
Accession: NZ_CP067228 Location: 1..53553 Organism: Paracoccus sp. MC1862 Replicon: plasmid unnamed3
Accession: NZ_CP067228 Location: 1..53553 Organism: Paracoccus sp. MC1862 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JGR78_RS17190 () | 326..1378 | + | 1053 | WP_182805150.1 | replication initiator protein A | - |
| JGR78_RS17195 () | 1385..1735 | - | 351 | WP_182805152.1 | stability/partitioning determinant | - |
| JGR78_RS17200 () | 1737..2423 | - | 687 | WP_182805154.1 | ParA family protein | - |
| JGR78_RS17205 () | 2969..3392 | - | 424 | Protein_3 | type II toxin-antitoxin system VapC family toxin | - |
| JGR78_RS17210 () | 3392..3646 | - | 255 | WP_182805157.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| JGR78_RS17215 () | 3785..4036 | - | 252 | WP_182805205.1 | BrnA antitoxin family protein | Antitoxin Detail |
| JGR78_RS17220 () | 4072..4320 | - | 249 | WP_182805159.1 | BrnT family toxin | Toxin Detail |
| JGR78_RS17225 () | 4354..5142 | - | 789 | WP_200559551.1 | hypothetical protein | - |
| JGR78_RS17230 () | 5736..5996 | - | 261 | WP_182805164.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| JGR78_RS17235 () | 5883..6260 | + | 378 | WP_182805207.1 | sugar transferase | - |
| JGR78_RS17240 () | 7277..7636 | - | 360 | WP_182805166.1 | type II toxin-antitoxin system VapC family toxin | - |
| JGR78_RS17245 () | 7633..7857 | - | 225 | WP_182805169.1 | hypothetical protein | - |
| JGR78_RS17250 () | 8345..9187 | + | 843 | WP_182805171.1 | replication initiation protein | - |
| JGR78_RS17255 () | 9439..9840 | - | 402 | WP_182805173.1 | hypothetical protein | - |
| JGR78_RS17260 () | 10386..10577 | - | 192 | WP_182805175.1 | hypothetical protein | - |
| JGR78_RS17265 () | 10592..12784 | - | 2193 | WP_182805177.1 | T-DNA border endonuclease VirD2 | Relaxase |
| JGR78_RS17270 () | 12781..13272 | - | 492 | WP_182805180.1 | hypothetical protein | Relaxase |
| JGR78_RS17275 () | 13782..14000 | - | 219 | WP_182805182.1 | hypothetical protein | - |
| JGR78_RS17280 () | 14237..14848 | - | 612 | Protein_18 | IS3 family transposase ISRtr2 | Transposase |
| JGR78_RS17285 () | 14907..16406 | + | 1500 | WP_182805185.1 | IS66 family transposase ISPre3 | Transposase |
| JGR78_RS17290 () | 16640..17530 | + | 891 | WP_182805187.1 | hypothetical protein | - |
| JGR78_RS17295 () | 17894..18424 | + | 531 | WP_182805209.1 | CAP domain-containing protein | - |
| JGR78_RS17300 () | 18746..19108 | - | 363 | WP_182805189.1 | H-NS histone family protein | - |
| JGR78_RS17305 () | 19271..19828 | - | 558 | WP_182805191.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| JGR78_RS17310 () | 20059..21171 | + | 1113 | WP_182805193.1 | glycosyltransferase | - |
| JGR78_RS17320 () | 22594..23550 | + | 957 | WP_182805197.1 | glycosyltransferase | - |
| JGR78_RS17325 () | 23629..24358 | - | 730 | Protein_27 | IS3 family transposase ISKpn11 | Transposase |
| JGR78_RS17330 () | 24690..25238 | + | 549 | WP_182805211.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | VF |
| JGR78_RS17335 () | 25240..26277 | + | 1038 | WP_182805199.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| JGR78_RS17340 () | 26283..27134 | + | 852 | WP_182805201.1 | dTDP-4-dehydrorhamnose reductase | - |
| JGR78_RS17345 () | 27131..28000 | + | 870 | WP_182805203.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| JGR78_RS17350 () | 28163..28687 | + | 525 | Protein_32 | IS5 family transposase ISPaes2 | Transposase |
| JGR78_RS17355 () | 28740..29709 | - | 970 | Protein_33 | IS5 family transposase ISPpa8 | Transposase |
| JGR78_RS17360 () | 30027..31055 | - | 1029 | WP_200559299.1 | IS110 family transposase ISPko7 | Transposase |
| JGR78_RS17365 () | 31307..31765 | + | 459 | WP_182806245.1 | IS66 family transposase ISRhsp5 | Transposase |
| JGR78_RS17370 () | 31765..32118 | + | 354 | WP_182806250.1 | IS66 family transposase ISRhsp5 | Transposase |
| JGR78_RS17375 () | 32186..33754 | + | 1569 | WP_182806247.1 | IS66 family transposase ISRhsp5 | Transposase |
| JGR78_RS17380 () | 33813..34847 | + | 1035 | WP_182805117.1 | IS110 family transposase ISMdi10 | Transposase |
| JGR78_RS17385 () | 35384..36946 | + | 1563 | WP_182805119.1 | hypothetical protein | - |
| JGR78_RS17390 () | 37190..38464 | + | 1275 | WP_182805121.1 | glycosyltransferase family 61 protein | - |
| JGR78_RS17395 () | 38545..39573 | + | 1029 | WP_182805123.1 | glycosyltransferase | - |
| JGR78_RS17400 () | 39551..40774 | + | 1224 | WP_182805125.1 | oligosaccharide repeat unit polymerase | - |
| JGR78_RS17405 () | 40743..41447 | - | 705 | WP_182805127.1 | glycosyltransferase | - |
| JGR78_RS17410 () | 41717..42616 | + | 900 | WP_182805129.1 | glycosyltransferase | - |
| JGR78_RS17415 () | 42667..44166 | - | 1500 | WP_182805131.1 | O-antigen translocase | - |
| JGR78_RS17420 () | 44419..45504 | - | 1086 | WP_182805134.1 | dTDP-3-amino-3,4,6-trideoxy-alpha-D-glucose transaminase | VF |
| JGR78_RS17425 () | 45501..46550 | - | 1050 | WP_200559549.1 | glycosyltransferase family 2 protein | - |
| JGR78_RS17430 () | 46577..46993 | - | 417 | WP_182805138.1 | FdtA/QdtA family cupin domain-containing protein | - |
| JGR78_RS17435 () | 46990..47541 | - | 552 | WP_182805140.1 | GNAT family N-acetyltransferase | - |
| JGR78_RS17440 () | 47526..48737 | - | 1212 | WP_182805142.1 | glycosyltransferase | - |
| JGR78_RS17445 () | 49303..49422 | - | 120 | Protein_51 | IS3 family transposase IS1133 | Transposase |
| JGR78_RS17450 () | 49504..50157 | - | 654 | WP_182805144.1 | YjbF family lipoprotein | - |
| JGR78_RS17455 () | 50154..52376 | - | 2223 | WP_182805146.1 | YjbH domain-containing protein | - |
| JGR78_RS17460 () | 52834..53229 | + | 396 | WP_200559550.1 | VanZ family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|