MGE detailed information
MGE type: Genomic_island MGE length: 20012 bp
Accession: NZ_CP067098 Location: 326470..346481 Organism: Pseudomonas sp. SW-3 Replicon: chromosome
Accession: NZ_CP067098 Location: 326470..346481 Organism: Pseudomonas sp. SW-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JIO00_RS01425 () | 322037..323317 | + | 1281 | WP_200667474.1 | four-carbon acid sugar kinase family protein | - |
| JIO00_RS01430 () | 323323..324324 | + | 1002 | WP_102593442.1 | 4-hydroxythreonine-4-phosphate dehydrogenase PdxA | - |
| JIO00_RS01435 () | 324380..325159 | + | 780 | WP_145309143.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| JIO00_RS01440 () | 325304..325600 | - | 297 | WP_010464659.1 | DUF3077 domain-containing protein | - |
| JIO00_RS01445 () | 326470..327075 | + | 606 | WP_200667475.1 | hypothetical protein | - |
| JIO00_RS01450 () | 327072..327299 | + | 228 | WP_102593444.1 | hypothetical protein | - |
| JIO00_RS01455 () | 327711..327932 | + | 222 | WP_010464654.1 | 4-oxalocrotonate tautomerase family protein | - |
| JIO00_RS01460 () | 327929..328585 | + | 657 | WP_200667476.1 | DsbA family oxidoreductase | - |
| JIO00_RS01465 () | 328629..329339 | + | 711 | WP_145309145.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| JIO00_RS01470 () | 329406..330248 | + | 843 | WP_200667477.1 | Fimbrial protein | VF |
| JIO00_RS01475 () | 330401..330607 | - | 207 | WP_042932964.1 | hypothetical protein | - |
| JIO00_RS01480 () | 331285..331878 | + | 594 | WP_154911939.1 | DUF4365 domain-containing protein | - |
| JIO00_RS01485 () | 331875..332984 | + | 1110 | WP_154911940.1 | hypothetical protein | - |
| JIO00_RS01490 () | 334212..336563 | - | 2352 | WP_154911941.1 | ATP-binding protein | - |
| JIO00_RS01495 () | 336796..337443 | + | 648 | Protein_291 | BRCT domain-containing protein | - |
| JIO00_RS01505 () | 337776..338600 | - | 825 | WP_200667478.1 | FkbM family methyltransferase | - |
| JIO00_RS01510 () | 338944..340173 | - | 1230 | WP_200667479.1 | methyltransferase | - |
| JIO00_RS01515 () | 340154..340843 | - | 690 | WP_010464640.1 | ABC transporter permease | - |
| JIO00_RS01520 () | 340840..341535 | - | 696 | WP_010464638.1 | ABC transporter permease | - |
| JIO00_RS01525 () | 341614..342360 | - | 747 | WP_200667480.1 | ABC transporter substrate-binding protein | - |
| JIO00_RS01530 () | 342374..343147 | - | 774 | WP_007897462.1 | Homogentisate 1,2-dioxygenase | VF |
| JIO00_RS01535 () | 343701..345092 | + | 1392 | WP_077747581.1 | GABA permease | - |
| JIO00_RS01540 () | 345438..345764 | + | 327 | WP_010464627.1 | hypothetical protein | - |
| JIO00_RS01545 () | 345844..346251 | - | 408 | WP_010464625.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| JIO00_RS01550 () | 346251..346481 | - | 231 | WP_083375253.1 | antitoxin | Antitoxin Detail |
| JIO00_RS01555 () | 346657..347109 | - | 453 | WP_154911946.1 | hypothetical protein | - |
| JIO00_RS01560 () | 347115..347531 | - | 417 | WP_200667481.1 | hypothetical protein | - |
| JIO00_RS01565 () | 347569..348543 | - | 975 | WP_200667482.1 | alpha/beta fold hydrolase | - |
| JIO00_RS01570 () | 348727..349170 | - | 444 | Protein_305 | hypothetical protein | - |
| JIO00_RS01575 () | 349432..349881 | + | 450 | WP_010464612.1 | hypothetical protein | - |
| JIO00_RS01580 () | 349919..350380 | - | 462 | WP_010464610.1 | DUF4234 domain-containing protein | - |
| JIO00_RS01590 () | 350892..351164 | - | 273 | WP_010464608.1 | oxidative damage protection protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|