MGE detailed information
MGE type: Conjugative plasmid MGE length: 93939 bp
Accession: NZ_CP067092 Location: 1..93939 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ER3625 Replicon: plasmid pSLT
Accession: NZ_CP067092 Location: 1..93939 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ER3625 Replicon: plasmid pSLT
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJB80_RS23155 (JJB80_23150) | 94..378 | + | 285 | WP_000477658.1 | hypothetical protein | - |
| JJB80_RS23160 (JJB80_23155) | 391..546 | + | 156 | WP_000983042.1 | hypothetical protein | - |
| JJB80_RS23165 (JJB80_23160) | 668..1223 | + | 556 | Protein_2 | Phospholipase D | VF |
| JJB80_RS23170 (JJB80_23165) | 1334..1600 | + | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| JJB80_RS23175 (JJB80_23170) | 1850..1927 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| JJB80_RS23180 (JJB80_23175) | 1908..2789 | + | 882 | WP_210138965.1 | incFII family plasmid replication initiator RepA | - |
| JJB80_RS23185 (JJB80_23180) | 3574..3870 | + | 297 | WP_254888533.1 | SdiA-regulated domain-containing protein | - |
| JJB80_RS23190 (JJB80_23185) | 3967..4725 | - | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| JJB80_RS23195 (JJB80_23190) | 4992..5549 | - | 558 | WP_000725062.1 | Attachment invasion locus protein | VF |
| JJB80_RS23200 (JJB80_23195) | 5639..6538 | - | 900 | WP_210138966.1 | YjiK family protein | - |
| JJB80_RS23205 (JJB80_23200) | 6535..6681 | - | 147 | WP_001192557.1 | hypothetical protein | - |
| JJB80_RS23210 (JJB80_23205) | 6671..7324 | - | 654 | WP_000178592.1 | DsbA family protein | - |
| JJB80_RS23215 (JJB80_23210) | 7569..7919 | - | 351 | WP_001526811.1 | Transcriptional regulatory protein RcsB | VF |
| JJB80_RS23220 (JJB80_23215) | 7904..8116 | - | 213 | WP_000004313.1 | hypothetical protein | VF |
| JJB80_RS23225 (JJB80_23220) | 8548..9423 | - | 876 | WP_010999939.1 | membrane protein | - |
| JJB80_RS23230 (JJB80_23225) | 9676..10233 | - | 558 | WP_010999940.1 | membrane protein | - |
| JJB80_RS23235 (JJB80_23230) | 10248..10940 | - | 693 | WP_001038510.1 | Chaperone protein FaeE | VF |
| JJB80_RS23240 (JJB80_23235) | 10933..13341 | - | 2409 | WP_210138967.1 | Outer membrane usher protein FimD | VF |
| JJB80_RS23245 (JJB80_23240) | 13569..14087 | - | 519 | WP_000748205.1 | hypothetical protein | VF |
| JJB80_RS23250 (JJB80_23245) | 14362..14664 | - | 303 | WP_000979451.1 | Major pilu subunit operon regulatory protein PapB | VF |
| JJB80_RS23255 (JJB80_23250) | 15383..15764 | + | 382 | Protein_20 | YgiW/YdeI family stress tolerance OB fold protein | - |
| JJB80_RS23260 (JJB80_23255) | 15933..16377 | + | 445 | Protein_21 | tyrosine-type recombinase/integrase | - |
| JJB80_RS23265 (JJB80_23260) | 16636..17625 | - | 990 | WP_210138968.1 | RepB family plasmid replication initiator protein | - |
| JJB80_RS23270 (JJB80_23265) | 18119..18415 | - | 297 | WP_001687482.1 | hypothetical protein | - |
| JJB80_RS23920 | 18427..18855 | + | 429 | Protein_24 | hypothetical protein | - |
| JJB80_RS23275 (JJB80_23270) | 18899..19420 | - | 522 | WP_010999942.1 | hypothetical protein | - |
| JJB80_RS23280 (JJB80_23275) | 20096..20314 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| JJB80_RS23285 (JJB80_23280) | 20316..20621 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| JJB80_RS23290 (JJB80_23285) | 20623..20913 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| JJB80_RS23295 (JJB80_23290) | 20910..21431 | + | 522 | WP_000198608.1 | hypothetical protein | - |
| JJB80_RS23300 (JJB80_23295) | 21466..22248 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| JJB80_RS23305 (JJB80_23300) | 22257..22808 | + | 552 | WP_000545754.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| JJB80_RS23310 (JJB80_23305) | 22995..23483 | + | 489 | WP_001075507.1 | CaiF/GrlA family transcriptional regulator | - |
| JJB80_RS23315 (JJB80_23310) | 23477..23962 | + | 486 | WP_000905606.1 | membrane protein | - |
| JJB80_RS23320 (JJB80_23315) | 24239..24526 | - | 288 | WP_071530243.1 | hypothetical protein | - |
| JJB80_RS23325 (JJB80_23320) | 24682..25242 | + | 561 | WP_000900095.1 | Invasin | VF |
| JJB80_RS23330 (JJB80_23325) | 25309..25659 | - | 351 | WP_001541541.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| JJB80_RS23335 (JJB80_23330) | 25716..26140 | + | 425 | Protein_37 | IS200/IS605 family transposase | - |
| JJB80_RS23340 (JJB80_23335) | 26267..26917 | - | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| JJB80_RS23345 (JJB80_23340) | 27178..27903 | - | 726 | WP_001122242.1 | MAPK phosphothreonine lyase | VF |
| JJB80_RS23350 (JJB80_23345) | 28185..29960 | - | 1776 | WP_210138969.1 | Mono(ADP-ribosyl)transferase SpvB | VF |
| JJB80_RS23355 (JJB80_23350) | 30012..30179 | - | 168 | WP_001526987.1 | hypothetical protein | - |
| JJB80_RS23360 (JJB80_23355) | 30142..30909 | - | 768 | WP_001526990.1 | virulence protein SpvA | - |
| JJB80_RS23365 (JJB80_23360) | 31083..31247 | - | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| JJB80_RS23370 (JJB80_23365) | 31421..32314 | - | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| JJB80_RS23375 (JJB80_23370) | 32923..33960 | + | 1038 | WP_001121399.1 | IS630 family transposase ISEc33 | Transposase |
| JJB80_RS23380 (JJB80_23375) | 34149..35174 | - | 1026 | WP_001576625.1 | ExeA family protein | - |
| JJB80_RS23385 (JJB80_23380) | 35107..36771 | - | 1665 | WP_000098783.1 | IS481 family transposase ISAzs36 | Transposase |
| JJB80_RS23390 (JJB80_23385) | 36755..37315 | - | 561 | WP_001240331.1 | Tn3 family transposase ISPsy42 | Transposase |
| JJB80_RS23395 (JJB80_23390) | 37522..38262 | - | 741 | WP_001541566.1 | carbonic anhydrase family protein | - |
| JJB80_RS23400 (JJB80_23395) | 38917..39405 | - | 489 | WP_001135407.1 | hypothetical protein | - |
| JJB80_RS23405 (JJB80_23400) | 39664..40779 | + | 1116 | WP_001247118.1 | DNA-binding protein | - |
| JJB80_RS23410 (JJB80_23405) | 40865..41281 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| JJB80_RS23415 (JJB80_23410) | 41384..41800 | + | 417 | WP_000988946.1 | hypothetical protein | - |
| JJB80_RS23420 (JJB80_23415) | 41857..42458 | + | 602 | Protein_54 | DUF2913 family protein | - |
| JJB80_RS23425 (JJB80_23420) | 42455..43396 | - | 942 | WP_000728917.1 | Recombination-promoting nuclease RpnA | VF |
| JJB80_RS23430 (JJB80_23425) | 43811..45016 | + | 1206 | WP_000427676.1 | AAA family ATPase | - |
| JJB80_RS23435 (JJB80_23430) | 45016..45990 | + | 975 | WP_000064274.1 | ParB family protein | - |
| JJB80_RS23440 (JJB80_23435) | 46072..47346 | - | 1275 | WP_000457541.1 | Y-family DNA polymerase | - |
| JJB80_RS23445 (JJB80_23440) | 47346..47768 | - | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JJB80_RS23450 (JJB80_23445) | 48279..48749 | + | 471 | WP_000490265.1 | hypothetical protein | - |
| JJB80_RS23455 (JJB80_23450) | 48742..49098 | + | 357 | WP_000369839.1 | hypothetical protein | - |
| JJB80_RS23925 | 49036..49317 | - | 282 | WP_146671468.1 | hypothetical protein | - |
| JJB80_RS23460 (JJB80_23455) | 49480..50160 | + | 681 | WP_000088645.1 | DNA methylase | - |
| JJB80_RS23465 (JJB80_23460) | 50160..50381 | + | 222 | WP_001109588.1 | hypothetical protein | - |
| JJB80_RS23470 (JJB80_23465) | 50437..50850 | + | 414 | WP_000990114.1 | DUF1380 family protein | - |
| JJB80_RS23475 (JJB80_23470) | 50922..51686 | + | 765 | WP_001246548.1 | membrane protein | - |
| JJB80_RS23480 (JJB80_23475) | 52182..52616 | + | 435 | WP_001200150.1 | antirestriction protein | - |
| JJB80_RS23485 (JJB80_23480) | 52683..53117 | + | 435 | WP_000274533.1 | DUF1380 family protein | - |
| JJB80_RS23490 (JJB80_23485) | 53353..53676 | + | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| JJB80_RS23495 (JJB80_23490) | 53640..53807 | + | 168 | WP_154074060.1 | hypothetical protein | - |
| JJB80_RS23500 (JJB80_23495) | 54401..54919 | + | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| JJB80_RS23505 (JJB80_23500) | 54974..55216 | + | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| JJB80_RS23510 (JJB80_23505) | 55285..57282 | + | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| JJB80_RS23515 (JJB80_23510) | 57322..57756 | + | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| JJB80_RS23520 (JJB80_23515) | 57753..58490 | + | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| JJB80_RS23985 | 58525..58653 | + | 129 | WP_000372429.1 | hypothetical protein | - |
| JJB80_RS23525 (JJB80_23520) | 58739..58897 | + | 159 | WP_001704449.1 | hypothetical protein | - |
| JJB80_RS23530 (JJB80_23525) | 59000..59818 | + | 819 | Protein_78 | DUF932 domain-containing protein | - |
| JJB80_RS23535 (JJB80_23530) | 60129..60599 | - | 471 | WP_001526856.1 | hypothetical protein | VF |
| JJB80_RS23540 (JJB80_23535) | 61014..61394 | + | 381 | WP_001151546.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| JJB80_RS23545 (JJB80_23540) | 61587..62273 | + | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| JJB80_RS23550 (JJB80_23545) | 62367..62594 | + | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| JJB80_RS23555 (JJB80_23550) | 62636..62998 | + | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| JJB80_RS23560 (JJB80_23555) | 63013..63324 | + | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| JJB80_RS23565 (JJB80_23560) | 63346..63912 | + | 567 | WP_000399769.1 | type IV conjugative transfer system protein TraE | - |
| JJB80_RS23570 (JJB80_23565) | 63899..64639 | + | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
| JJB80_RS23575 (JJB80_23570) | 64639..66060 | + | 1422 | WP_000146700.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| JJB80_RS23580 (JJB80_23575) | 66050..66646 | + | 597 | WP_000527896.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| JJB80_RS23585 (JJB80_23580) | 66624..66869 | + | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| JJB80_RS23590 (JJB80_23585) | 66866..67381 | + | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| JJB80_RS23595 (JJB80_23590) | 67516..67737 | + | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| JJB80_RS23600 (JJB80_23595) | 67730..68197 | + | 468 | WP_000549562.1 | hypothetical protein | - |
| JJB80_RS23605 (JJB80_23600) | 68314..68577 | + | 264 | WP_001239256.1 | hypothetical protein | - |
| JJB80_RS23610 (JJB80_23605) | 68593..71241 | + | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| JJB80_RS23615 (JJB80_23610) | 71216..71602 | + | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| JJB80_RS23620 (JJB80_23615) | 71599..72231 | + | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| JJB80_RS23625 (JJB80_23620) | 72228..73220 | + | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| JJB80_RS23630 (JJB80_23625) | 73239..73547 | + | 309 | WP_010999945.1 | hypothetical protein | - |
| JJB80_RS23635 (JJB80_23630) | 73532..74170 | + | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| JJB80_RS23640 (JJB80_23635) | 74207..74626 | + | 420 | WP_001229397.1 | HNH endonuclease signature motif containing protein | - |
| JJB80_RS23645 (JJB80_23640) | 74623..76449 | + | 1827 | WP_000827528.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| JJB80_RS23650 (JJB80_23645) | 76460..76675 | + | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| JJB80_RS23655 (JJB80_23650) | 76687..77436 | + | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| JJB80_RS23660 (JJB80_23655) | 77650..77943 | + | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| JJB80_RS23665 (JJB80_23660) | 77930..78478 | + | 549 | WP_000055840.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| JJB80_RS23670 (JJB80_23665) | 78468..79850 | + | 1383 | WP_001161719.1 | conjugal transfer pilus assembly protein TraH | - |
| JJB80_RS23675 (JJB80_23670) | 79847..82669 | + | 2823 | WP_001007086.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| JJB80_RS23680 (JJB80_23675) | 82685..83179 | + | 495 | WP_010999946.1 | entry exclusion protein | - |
| JJB80_RS23685 (JJB80_23680) | 83215..83946 | + | 732 | WP_000782438.1 | conjugal transfer complement resistance protein TraT | - |
| JJB80_RS23690 (JJB80_23685) | 84323..86566 | + | 2244 | WP_000009320.1 | type IV conjugative transfer system coupling protein TraD | - |
| JJB80_RS23695 (JJB80_23690) | 86575..86973 | - | 399 | WP_000911322.1 | type II toxin-antitoxin system VapC family toxin | - |
| JJB80_RS23700 (JJB80_23695) | 86973..87200 | - | 228 | WP_000450265.1 | toxin-antitoxin system antitoxin VapB | - |
| JJB80_RS23705 (JJB80_23700) | 87282..92540 | + | 5259 | WP_000986921.1 | Multifunctional conjugation protein TraI | Relaxase |
| JJB80_RS23710 (JJB80_23705) | 92560..93300 | + | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| JJB80_RS23715 (JJB80_23710) | 93355..93918 | + | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|