MGE detailed information
MGE type: Genomic_island MGE length: 35158 bp
Accession: NZ_CP067091 Location: 316094..351251 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ER3625 Replicon: chromosome
Accession: NZ_CP067091 Location: 316094..351251 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ER3625 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJB80_RS01370 () | 311095..313734 | + | 2640 | WP_000449778.1 | type VI secretion system ATPase TssH | - |
| JJB80_RS01375 () | 313834..314376 | + | 543 | WP_000996817.1 | type VI secretion system contractile sheath small subunit | - |
| JJB80_RS01380 () | 314400..315908 | + | 1509 | WP_000013881.1 | type VI secretion system contractile sheath large subunit | - |
| JJB80_RS01385 () | 315923..316081 | + | 159 | WP_001584850.1 | BPSL0067 family protein | - |
| JJB80_RS01390 () | 316208..316540 | + | 333 | WP_014344502.1 | hypothetical protein | - |
| JJB80_RS01395 () | 316794..317279 | + | 486 | WP_000312802.1 | Protein hcp1 | VF |
| JJB80_RS23725 () | 317347..317541 | + | 195 | Protein_271 | type VI secretion system lipoprotein TssJ | - |
| JJB80_RS01405 () | 317584..318069 | + | 486 | WP_001081550.1 | T6SS effector amidase Tae4 family protein | - |
| JJB80_RS01410 () | 318054..318437 | + | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| JJB80_RS01415 () | 318580..319065 | + | 486 | WP_000119443.1 | Protein hcp1 | VF |
| JJB80_RS01420 () | 319132..319668 | + | 537 | WP_001007106.1 | hypothetical protein | VF |
| JJB80_RS01425 () | 319672..321015 | + | 1344 | WP_000118732.1 | hypothetical protein | VF |
| JJB80_RS01430 () | 321012..322316 | + | 1305 | WP_000132483.1 | Outer membrane porin F | VF |
| JJB80_RS01435 () | 322321..323094 | + | 774 | WP_000976553.1 | Rap1a/Tai family immunity protein | - |
| JJB80_RS01440 () | 323297..323728 | + | 432 | WP_000227044.1 | Shiga toxin A subunit | - |
| JJB80_RS01445 () | 323762..327631 | + | 3870 | WP_001168955.1 | hypothetical protein | VF |
| JJB80_RS01450 () | 327631..328419 | + | 789 | WP_001254137.1 | TagF domain-containing protein | - |
| JJB80_RS01455 () | 328416..328832 | + | 417 | WP_001596567.1 | DUF2195 family protein | - |
| JJB80_RS01460 () | 328856..329377 | + | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| JJB80_RS01465 () | 329774..331963 | + | 2190 | WP_000011534.1 | Actin cross-linking toxin VgrG1 | VF |
| JJB80_RS01470 () | 331987..332433 | + | 447 | WP_000375832.1 | DcrB-related protein | - |
| JJB80_RS01475 () | 332452..336546 | + | 4095 | WP_210138907.1 | RHS repeat-associated core domain-containing protein | - |
| JJB80_RS01480 () | 336540..336803 | + | 264 | WP_000932531.1 | hypothetical protein | - |
| JJB80_RS01485 () | 336867..337736 | + | 870 | Protein_288 | Protein RhsC | VF |
| JJB80_RS01490 () | 337730..338176 | + | 447 | WP_000935097.1 | protein SciX | - |
| JJB80_RS01495 () | 338739..339176 | + | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| JJB80_RS01500 () | 339229..339504 | - | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| - | 339239..339661 | + | 423 | - | - | Antitoxin Detail |
| JJB80_RS23730 () | 339689..339862 | + | 174 | WP_088131292.1 | RHS repeat-associated core domain-containing protein | - |
| JJB80_RS01510 () | 339945..340253 | + | 309 | WP_010988969.1 | hypothetical protein | - |
| JJB80_RS01515 () | 340355..340603 | - | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| JJB80_RS01520 () | 340656..341360 | + | 705 | Protein_295 | integrase core domain-containing protein | - |
| JJB80_RS01525 () | 342110..342622 | + | 513 | WP_010988970.1 | Saf-pilin pilus formation protein SafA | - |
| JJB80_RS01530 () | 342706..343443 | + | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| JJB80_RS01535 () | 343467..345977 | + | 2511 | WP_210138908.1 | F1 capsule-anchoring protein | VF |
| JJB80_RS01540 () | 345999..346469 | + | 471 | Protein_299 | Protein AfaD | VF |
| JJB80_RS01545 () | 346875..347696 | + | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| JJB80_RS01550 () | 347779..348019 | + | 241 | Protein_301 | PerC family transcriptional regulator | - |
| JJB80_RS01555 () | 348511..349458 | + | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| JJB80_RS01560 () | 349575..349790 | + | 216 | WP_001575654.1 | hypothetical protein | - |
| JJB80_RS01565 () | 349794..350513 | - | 720 | WP_000787603.1 | Outer membrane protein PagN | VF |
| JJB80_RS01570 () | 350844..351251 | - | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| JJB80_RS01575 () | 351622..352389 | - | 768 | WP_000015789.1 | amidohydrolase | - |
| JJB80_RS01580 () | 352498..354942 | - | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| JJB80_RS01585 () | 355182..355760 | + | 579 | WP_000284051.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|