MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 64461 bp
Accession: NZ_CP067006 Location: 1220895..1285355 Organism: Xanthomonas campestris pv. campestris strain 54-2 Replicon: chromosome
Accession: NZ_CP067006 Location: 1220895..1285355 Organism: Xanthomonas campestris pv. campestris strain 54-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JH269_RS05100 (JH269_05090) | 1216777..1217436 | - | 660 | WP_057671625.1 | hypothetical protein | - |
| JH269_RS05105 (JH269_05095) | 1217433..1217963 | - | 531 | WP_011038239.1 | hypothetical protein | - |
| JH269_RS05110 (JH269_05100) | 1218361..1218909 | - | 549 | WP_081306975.1 | DUF4189 domain-containing protein | - |
| JH269_RS05115 (JH269_05105) | 1218978..1220117 | - | 1140 | WP_017117946.1 | type IV secretion system protein | - |
| JH269_RS05120 (JH269_05110) | 1220149..1220796 | - | 648 | WP_016848927.1 | hypothetical protein | - |
| JH269_RS05125 (JH269_05115) | 1221818..1223356 | - | 1539 | WP_011038243.1 | MASE1 domain-containing protein | - |
| JH269_RS05130 | 1224325..1224486 | - | 162 | Protein_987 | IS5/IS1182 family transposase | - |
| JH269_RS05135 (JH269_05120) | 1224547..1225749 | + | 1203 | WP_274495929.1 | hypothetical protein | - |
| JH269_RS05140 (JH269_05125) | 1225724..1226868 | + | 1145 | WP_087942063.1 | IS3 family transposase ISXac3 | Transposase |
| JH269_RS05145 (JH269_05130) | 1227417..1227896 | + | 480 | WP_075286085.1 | DNA repair protein RadC | - |
| JH269_RS05150 (JH269_05135) | 1227967..1228158 | + | 192 | WP_221261829.1 | hypothetical protein | - |
| JH269_RS05155 (JH269_05140) | 1228792..1228947 | + | 156 | WP_186009287.1 | hypothetical protein | - |
| JH269_RS05160 (JH269_05145) | 1228940..1230361 | + | 1422 | WP_267314848.1 | hypothetical protein | - |
| JH269_RS05165 (JH269_05150) | 1230389..1230643 | - | 255 | WP_057671639.1 | hypothetical protein | - |
| JH269_RS05170 (JH269_05155) | 1230910..1232505 | + | 1596 | WP_192012501.1 | MobA/MobL family protein | - |
| JH269_RS05175 (JH269_05160) | 1232578..1232946 | - | 369 | WP_225443877.1 | transcriptional regulator | - |
| JH269_RS05180 (JH269_05165) | 1232954..1233235 | - | 282 | WP_011348355.1 | DUF6516 family protein | - |
| JH269_RS05185 (JH269_05170) | 1233301..1233642 | - | 342 | WP_081020748.1 | hypothetical protein | - |
| JH269_RS05190 (JH269_05175) | 1234368..1234718 | + | 351 | WP_225443878.1 | hypothetical protein | - |
| JH269_RS05195 (JH269_05180) | 1235310..1235465 | + | 156 | WP_011038226.1 | hypothetical protein | - |
| JH269_RS05200 (JH269_05185) | 1235642..1236037 | + | 396 | WP_011038225.1 | hypothetical protein | - |
| JH269_RS05205 (JH269_05190) | 1236128..1236520 | + | 393 | WP_011038224.1 | H-NS family nucleoid-associated regulatory protein | - |
| JH269_RS05210 (JH269_05195) | 1237059..1239188 | - | 2130 | WP_267314849.1 | glycogen debranching protein GlgX | - |
| JH269_RS05215 (JH269_05200) | 1239681..1240556 | + | 876 | WP_011038222.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
| JH269_RS05220 (JH269_05205) | 1241206..1241883 | + | 678 | WP_003490678.1 | Transcriptional regulatory protein TcrA | VF |
| JH269_RS05225 (JH269_05210) | 1241876..1243210 | + | 1335 | WP_019237347.1 | HAMP domain-containing sensor histidine kinase | - |
| JH269_RS05230 (JH269_05215) | 1243353..1243844 | - | 492 | WP_011038220.1 | GNAT family N-acetyltransferase | Toxin Detail |
| JH269_RS05235 (JH269_05220) | 1243841..1244131 | - | 291 | WP_011038219.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| JH269_RS05240 (JH269_05225) | 1244206..1244607 | - | 402 | WP_267314850.1 | SymE family type I addiction module toxin | - |
| JH269_RS05245 (JH269_05230) | 1245139..1245762 | - | 624 | WP_040940796.1 | dephospho-CoA kinase | - |
| JH269_RS05250 (JH269_05235) | 1245776..1246639 | - | 864 | WP_267314851.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| JH269_RS05255 (JH269_05240) | 1246646..1247905 | - | 1260 | WP_070690003.1 | Type II secretion system protein F | VF |
| JH269_RS05260 (JH269_05245) | 1248256..1248675 | + | 420 | WP_116670568.1 | Fimbrial protein | VF |
| JH269_RS05265 (JH269_05250) | 1248918..1250624 | + | 1707 | WP_181920283.1 | putative type II secretion system protein HxcR | VF |
| JH269_RS05270 (JH269_05255) | 1250807..1251544 | - | 738 | WP_070690009.1 | zeta toxin family protein | - |
| JH269_RS05275 (JH269_05260) | 1251544..1251900 | - | 357 | WP_139328384.1 | hypothetical protein | - |
| JH269_RS05280 (JH269_05265) | 1252098..1253492 | - | 1395 | WP_267314854.1 | Regulatory protein AtoC | VF |
| JH269_RS05285 (JH269_05270) | 1253702..1255312 | - | 1611 | WP_040940804.1 | Globin-coupled histidine kinase | VF |
| JH269_RS05290 (JH269_05275) | 1255546..1256715 | + | 1170 | WP_012437609.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| JH269_RS05295 (JH269_05280) | 1256740..1257615 | + | 876 | WP_011038208.1 | succinate--CoA ligase subunit alpha | - |
| JH269_RS05300 (JH269_05285) | 1257845..1258129 | + | 285 | WP_040942253.1 | CopG family transcriptional regulator | - |
| JH269_RS05305 (JH269_05290) | 1258133..1258435 | + | 303 | WP_011038207.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JH269_RS05310 (JH269_05295) | 1258435..1260090 | + | 1656 | WP_019237353.1 | NAD+ synthase | - |
| JH269_RS05315 (JH269_05300) | 1260084..1261070 | - | 987 | WP_267314855.1 | hypothetical protein | - |
| JH269_RS05320 (JH269_05305) | 1261523..1262404 | - | 882 | WP_267314856.1 | outer membrane protein assembly factor BamD | - |
| JH269_RS05325 (JH269_05310) | 1262527..1263522 | + | 996 | WP_016944992.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
| JH269_RS05330 (JH269_05315) | 1263524..1264324 | + | 801 | WP_267314857.1 | peptidoglycan editing factor PgeF | - |
| JH269_RS05335 (JH269_05320) | 1264345..1264842 | + | 498 | WP_050911332.1 | DUF4166 domain-containing protein | - |
| JH269_RS05340 (JH269_05325) | 1264829..1265248 | + | 420 | WP_012437616.1 | thiol-disulfide oxidoreductase DCC family protein | - |
| JH269_RS05345 (JH269_05330) | 1265884..1267752 | - | 1869 | WP_012437618.1 | Methyl-accepting chemotaxis protein I | VF |
| JH269_RS05350 (JH269_05335) | 1268284..1270719 | - | 2436 | WP_029628877.1 | glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase | - |
| JH269_RS05355 (JH269_05340) | 1271627..1272994 | - | 1368 | WP_014508687.1 | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | - |
| JH269_RS05360 (JH269_05345) | 1272991..1274769 | - | 1779 | WP_040940809.1 | glycoside hydrolase family 15 protein | - |
| JH269_RS05365 (JH269_05350) | 1274819..1275577 | - | 759 | WP_011038195.1 | trehalose-phosphatase | - |
| JH269_RS05370 (JH269_05355) | 1276272..1278707 | - | 2436 | WP_076054194.1 | TonB-dependent receptor | - |
| JH269_RS05375 (JH269_05360) | 1278912..1279385 | + | 474 | WP_267314858.1 | DUF3574 domain-containing protein | - |
| JH269_RS05380 (JH269_05365) | 1279409..1280281 | + | 873 | WP_267314859.1 | hypothetical protein | - |
| JH269_RS05385 (JH269_05370) | 1280419..1282020 | + | 1602 | WP_116889321.1 | hypothetical protein | - |
| JH269_RS05390 (JH269_05375) | 1282017..1283183 | + | 1167 | WP_267314860.1 | lysozyme inhibitor LprI family protein | - |
| JH269_RS05395 (JH269_05380) | 1283577..1284389 | + | 813 | WP_274514925.1 | DUF3014 domain-containing protein | - |
| JH269_RS05400 (JH269_05385) | 1284583..1285290 | - | 708 | WP_012437628.1 | glutathione S-transferase | - |
| JH269_RS05405 (JH269_05390) | 1285334..1285642 | - | 309 | WP_011038187.1 | GIY-YIG nuclease family protein | - |
| JH269_RS05410 (JH269_05395) | 1285971..1286228 | + | 258 | WP_019237375.1 | hypothetical protein | - |
| JH269_RS05415 (JH269_05400) | 1286382..1288967 | + | 2586 | WP_267314861.1 | ATP-dependent chaperone ClpB | - |
| JH269_RS05420 (JH269_05405) | 1289104..1290016 | + | 913 | Protein_1045 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|