MGE detailed information
MGE type: Genomic_island MGE length: 64363 bp
Accession: NZ_CP067002 Location: 3655694..3720056 Organism: Xanthomonas campestris pv. campestris strain 39-3 Replicon: chromosome
Accession: NZ_CP067002 Location: 3655694..3720056 Organism: Xanthomonas campestris pv. campestris strain 39-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JH263_RS16215 (JH263_16150) | 3651421..3652302 | + | 882 | WP_274514258.1 | outer membrane protein assembly factor BamD | - |
| JH263_RS16220 (JH263_16155) | 3652753..3653739 | + | 987 | WP_274514259.1 | hypothetical protein | - |
| JH263_RS16225 (JH263_16160) | 3653733..3655388 | - | 1656 | WP_057671669.1 | NAD+ synthase | - |
| JH263_RS16230 (JH263_16165) | 3655388..3655690 | - | 303 | WP_011038207.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JH263_RS16235 (JH263_16170) | 3655694..3655978 | - | 285 | WP_040942253.1 | CopG family transcriptional regulator | - |
| JH263_RS16240 (JH263_16175) | 3656208..3657083 | - | 876 | WP_011038208.1 | succinate--CoA ligase subunit alpha | - |
| JH263_RS16245 (JH263_16180) | 3657108..3658277 | - | 1170 | WP_011038209.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| JH263_RS16250 (JH263_16185) | 3658511..3660121 | + | 1611 | WP_040940804.1 | Adaptive-response sensory-kinase SasA | VF |
| JH263_RS16255 (JH263_16190) | 3660331..3661725 | + | 1395 | WP_274497633.1 | Anaerobic nitric oxide reductase transcription regulator NorR | VF |
| JH263_RS16260 (JH263_16195) | 3662143..3663849 | - | 1707 | WP_228943908.1 | hypothetical protein | VF |
| JH263_RS16265 (JH263_16200) | 3663908..3664282 | - | 375 | WP_269467167.1 | pilin | - |
| JH263_RS16270 (JH263_16205) | 3664398..3664847 | - | 450 | WP_274514260.1 | hypothetical protein | VF |
| JH263_RS16275 (JH263_16210) | 3665184..3666440 | + | 1257 | WP_075285409.1 | hypothetical protein | VF |
| JH263_RS16280 (JH263_16215) | 3666447..3667310 | + | 864 | WP_274514261.1 | hypothetical protein | VF |
| JH263_RS16285 (JH263_16220) | 3667324..3667947 | + | 624 | WP_274514262.1 | dephospho-CoA kinase | - |
| JH263_RS16290 (JH263_16225) | 3668479..3668880 | + | 402 | WP_274514263.1 | SymE family type I addiction module toxin | - |
| JH263_RS16295 (JH263_16230) | 3668955..3669245 | + | 291 | WP_011038219.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| JH263_RS16300 (JH263_16235) | 3669242..3669733 | + | 492 | WP_227971330.1 | GNAT family N-acetyltransferase | Toxin Detail |
| JH263_RS16305 (JH263_16240) | 3669876..3671210 | - | 1335 | WP_012437598.1 | HAMP domain-containing sensor histidine kinase | - |
| JH263_RS16310 (JH263_16245) | 3671203..3671880 | - | 678 | WP_003490678.1 | Regulator of RpoS | VF |
| JH263_RS16315 (JH263_16250) | 3671911..3672384 | - | 474 | WP_012437597.1 | hypothetical protein | - |
| JH263_RS16320 (JH263_16255) | 3672607..3673482 | - | 876 | WP_016945000.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
| JH263_RS16325 (JH263_16260) | 3673978..3676107 | + | 2130 | WP_016945001.1 | glycogen debranching protein GlgX | - |
| JH263_RS16330 (JH263_16265) | 3676632..3677024 | - | 393 | WP_012437593.1 | H-NS family nucleoid-associated regulatory protein | - |
| JH263_RS16335 (JH263_16270) | 3677115..3677510 | - | 396 | WP_016945003.1 | hypothetical protein | - |
| JH263_RS16340 (JH263_16275) | 3677687..3677842 | - | 156 | WP_075285405.1 | hypothetical protein | - |
| JH263_RS16345 (JH263_16280) | 3677906..3678136 | + | 231 | WP_157769280.1 | hypothetical protein | - |
| JH263_RS16350 (JH263_16285) | 3678426..3678842 | - | 417 | WP_227971334.1 | hypothetical protein | - |
| JH263_RS16355 (JH263_16290) | 3679091..3679330 | + | 240 | WP_274514264.1 | hypothetical protein | - |
| JH263_RS16360 (JH263_16295) | 3679407..3679772 | + | 366 | WP_116670930.1 | hypothetical protein | - |
| JH263_RS16365 (JH263_16300) | 3679816..3681408 | - | 1593 | WP_274514265.1 | MobA/MobL family protein | - |
| JH263_RS16370 (JH263_16305) | 3681667..3681993 | + | 327 | WP_274514266.1 | hypothetical protein | - |
| JH263_RS16375 (JH263_16310) | 3682260..3682529 | + | 270 | WP_258873713.1 | HNH endonuclease | - |
| JH263_RS16380 (JH263_16315) | 3682649..3683083 | + | 435 | WP_258873711.1 | hypothetical protein | - |
| JH263_RS16385 (JH263_16320) | 3683131..3683583 | + | 453 | WP_274514267.1 | hypothetical protein ; Integrase | Integrase |
| JH263_RS16390 | 3683595..3684398 | + | 804 | WP_274514268.1 | HNH endonuclease | - |
| JH263_RS16395 (JH263_16330) | 3684410..3685060 | - | 651 | WP_116670935.1 | hypothetical protein | - |
| JH263_RS16400 (JH263_16335) | 3685100..3689122 | - | 4023 | WP_274514269.1 | hypothetical protein | - |
| JH263_RS16405 (JH263_16340) | 3689160..3689798 | - | 639 | WP_116670799.1 | DUF1629 domain-containing protein | - |
| JH263_RS16410 (JH263_16345) | 3689932..3691296 | - | 1365 | WP_116670798.1 | hypothetical protein | - |
| JH263_RS16415 (JH263_16350) | 3691299..3693389 | - | 2091 | WP_274514270.1 | DUF87 domain-containing protein | - |
| JH263_RS16420 (JH263_16355) | 3693403..3694293 | - | 891 | WP_116670796.1 | DNA adenine methylase | - |
| JH263_RS16425 (JH263_16360) | 3694511..3694702 | - | 192 | WP_116670795.1 | hypothetical protein | - |
| JH263_RS16430 (JH263_16365) | 3694772..3694927 | - | 156 | Protein_3171 | JAB domain-containing protein | - |
| JH263_RS16435 (JH263_16370) | 3694992..3696124 | + | 1133 | WP_087942069.1 | IS3 family transposase IS476 | Transposase |
| JH263_RS16440 (JH263_16375) | 3696350..3696997 | + | 648 | WP_033836538.1 | hypothetical protein | - |
| JH263_RS16445 (JH263_16380) | 3697029..3698165 | + | 1137 | WP_274514271.1 | type IV secretion system protein | - |
| JH263_RS16450 (JH263_16385) | 3698209..3698739 | + | 531 | WP_237352374.1 | DUF4189 domain-containing protein | - |
| JH263_RS16455 (JH263_16390) | 3699117..3699647 | + | 531 | WP_237352373.1 | hypothetical protein | - |
| JH263_RS16460 (JH263_16395) | 3699713..3700303 | + | 591 | WP_104599556.1 | hypothetical protein | - |
| JH263_RS16465 (JH263_16400) | 3700300..3701670 | + | 1371 | WP_274514272.1 | hypothetical protein | - |
| JH263_RS16470 | 3702125..3702400 | + | 276 | WP_274514788.1 | DUF4189 domain-containing protein | - |
| JH263_RS16475 (JH263_16410) | 3702479..3703018 | + | 540 | WP_274514273.1 | DUF4189 domain-containing protein | - |
| JH263_RS16480 (JH263_16415) | 3703145..3705067 | - | 1923 | WP_274514274.1 | MobH family relaxase | - |
| JH263_RS16485 (JH263_16420) | 3705518..3706474 | + | 957 | WP_274514275.1 | hypothetical protein | VF |
| JH263_RS16490 (JH263_16425) | 3706578..3706868 | + | 291 | WP_274514276.1 | hypothetical protein | - |
| JH263_RS16495 (JH263_16430) | 3707024..3707950 | - | 927 | WP_274514277.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| JH263_RS16500 (JH263_16435) | 3707943..3708701 | - | 759 | WP_237352372.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| JH263_RS16510 (JH263_16445) | 3710156..3710650 | + | 495 | WP_274514278.1 | hypothetical protein | - |
| JH263_RS16515 (JH263_16450) | 3710647..3712359 | + | 1713 | WP_274514279.1 | ATP-dependent helicase | - |
| JH263_RS16520 (JH263_16455) | 3712645..3713442 | + | 798 | WP_274514280.1 | hypothetical protein | - |
| JH263_RS16525 (JH263_16460) | 3713872..3714756 | + | 885 | WP_029996258.1 | LysR family transcriptional regulator | - |
| JH263_RS16530 (JH263_16465) | 3714784..3715077 | - | 294 | WP_274514281.1 | hypothetical protein | VF |
| JH263_RS16535 (JH263_16470) | 3715180..3715830 | + | 651 | WP_274514282.1 | LysR substrate-binding domain-containing protein | - |
| JH263_RS16540 (JH263_16475) | 3715901..3716899 | - | 999 | WP_274514283.1 | hypothetical protein | - |
| JH263_RS16545 (JH263_16480) | 3716927..3717349 | - | 423 | WP_274514284.1 | hypothetical protein | - |
| JH263_RS16550 (JH263_16485) | 3717554..3717991 | - | 438 | WP_274514285.1 | hypothetical protein | - |
| JH263_RS16555 (JH263_16490) | 3718176..3720056 | - | 1881 | WP_274514286.1 | hypothetical protein ; Integrase | Integrase |
| JH263_RS16565 (JH263_16500) | 3720493..3722277 | - | 1785 | WP_274514789.1 | autotransporter domain-containing protein | - |
| JH263_RS16570 (JH263_16505) | 3722466..3722666 | + | 201 | WP_012437546.1 | sulfur carrier protein ThiS | - |
| JH263_RS16575 (JH263_16510) | 3722715..3723509 | + | 795 | WP_011038257.1 | thiazole synthase | - |
| JH263_RS16580 (JH263_16515) | 3723654..3724439 | + | 786 | WP_011038258.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|