MGE detailed information
MGE type: Genomic_island MGE length: 18562 bp
Accession: NZ_CP066999 Location: 1316885..1335446 Organism: Xanthomonas campestris pv. campestris strain 29-6 Replicon: chromosome
Accession: NZ_CP066999 Location: 1316885..1335446 Organism: Xanthomonas campestris pv. campestris strain 29-6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JH292_RS05560 (JH292_05535) | 1312439..1313224 | - | 786 | WP_011038258.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| JH292_RS05565 (JH292_05540) | 1313370..1314164 | - | 795 | WP_011038257.1 | thiazole synthase | - |
| JH292_RS05570 (JH292_05545) | 1314213..1314413 | - | 201 | WP_012437546.1 | sulfur carrier protein ThiS | - |
| JH292_RS05575 (JH292_05550) | 1314602..1316386 | + | 1785 | WP_040940779.1 | autotransporter domain-containing esterase | - |
| JH292_RS05585 (JH292_05560) | 1316885..1317235 | + | 351 | WP_274316879.1 | hypothetical protein | - |
| JH292_RS05590 (JH292_05565) | 1317525..1317755 | - | 231 | WP_165349436.1 | hypothetical protein | - |
| JH292_RS05595 (JH292_05570) | 1317819..1317974 | + | 156 | WP_129588884.1 | hypothetical protein | - |
| JH292_RS05600 (JH292_05575) | 1318151..1318546 | + | 396 | WP_016945003.1 | hypothetical protein | - |
| JH292_RS05605 (JH292_05580) | 1318637..1319029 | + | 393 | WP_129588885.1 | H-NS family nucleoid-associated regulatory protein | - |
| JH292_RS05610 (JH292_05585) | 1319564..1321693 | - | 2130 | WP_129588886.1 | glycogen debranching protein GlgX | - |
| JH292_RS05615 (JH292_05590) | 1322186..1323061 | + | 876 | WP_011038222.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
| JH292_RS05620 (JH292_05595) | 1323711..1324388 | + | 678 | WP_003490678.1 | Regulator of RpoS | VF |
| JH292_RS05625 (JH292_05600) | 1324381..1325715 | + | 1335 | WP_162808569.1 | HAMP domain-containing sensor histidine kinase | - |
| JH292_RS05630 (JH292_05605) | 1325858..1326349 | - | 492 | WP_011038220.1 | GNAT family N-acetyltransferase | Toxin Detail |
| JH292_RS05635 (JH292_05610) | 1326346..1326636 | - | 291 | WP_014508712.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| JH292_RS05640 (JH292_05615) | 1326712..1327139 | - | 428 | Protein_1089 | SymE family type I addiction module toxin | - |
| JH292_RS05645 (JH292_05620) | 1327778..1332538 | - | 4761 | WP_274497101.1 | hypothetical protein | VF |
| JH292_RS05650 (JH292_05625) | 1332683..1333303 | - | 621 | WP_129588888.1 | dephospho-CoA kinase | - |
| JH292_RS05655 (JH292_05630) | 1333317..1334180 | - | 864 | WP_129588889.1 | hypothetical protein | VF |
| JH292_RS05660 (JH292_05635) | 1334187..1335389 | - | 1203 | WP_227971345.1 | hypothetical protein | VF |
| JH292_RS05665 (JH292_05640) | 1335815..1336231 | + | 417 | WP_227971328.1 | pilin | - |
| JH292_RS05670 (JH292_05645) | 1336320..1336730 | + | 411 | WP_274316877.1 | pilin | - |
| JH292_RS05675 (JH292_05650) | 1336770..1338503 | + | 1734 | WP_227971327.1 | type IV-A pilus assembly ATPase PilB | - |
| JH292_RS05680 (JH292_05655) | 1338921..1340315 | - | 1395 | WP_042594919.1 | sigma-54 dependent transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|