MGE detailed information
MGE type: Genomic_island MGE length: 18634 bp
Accession: NZ_CP066986 Location: 1308097..1326730 Organism: Xanthomonas campestris pv. campestris strain 15-1 Replicon: chromosome
Accession: NZ_CP066986 Location: 1308097..1326730 Organism: Xanthomonas campestris pv. campestris strain 15-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JH296_RS05505 (JH296_05495) | 1303651..1304436 | - | 786 | WP_011038258.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| JH296_RS05510 (JH296_05500) | 1304582..1305376 | - | 795 | WP_011038257.1 | thiazole synthase | - |
| JH296_RS05515 (JH296_05505) | 1305425..1305625 | - | 201 | WP_012437546.1 | sulfur carrier protein ThiS | - |
| JH296_RS05520 (JH296_05510) | 1305814..1307598 | + | 1785 | WP_040940779.1 | autotransporter domain-containing esterase | - |
| JH296_RS05530 (JH296_05520) | 1308097..1308447 | + | 351 | WP_274316879.1 | hypothetical protein | - |
| JH296_RS05535 (JH296_05525) | 1308737..1308967 | - | 231 | WP_165349436.1 | hypothetical protein | - |
| JH296_RS05540 (JH296_05530) | 1309031..1309186 | + | 156 | WP_129588884.1 | hypothetical protein | - |
| JH296_RS05545 (JH296_05535) | 1309363..1309758 | + | 396 | WP_016945003.1 | hypothetical protein | - |
| JH296_RS05550 (JH296_05540) | 1309849..1310241 | + | 393 | WP_129588885.1 | H-NS family nucleoid-associated regulatory protein | - |
| JH296_RS05555 (JH296_05545) | 1310776..1312905 | - | 2130 | WP_129588886.1 | glycogen debranching protein GlgX | - |
| JH296_RS05560 (JH296_05550) | 1313398..1314273 | + | 876 | WP_011038222.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
| JH296_RS05565 (JH296_05555) | 1314923..1315600 | + | 678 | WP_003490678.1 | Transcriptional regulatory protein TcrA | VF |
| JH296_RS05570 (JH296_05560) | 1315593..1316927 | + | 1335 | WP_162808569.1 | HAMP domain-containing sensor histidine kinase | - |
| JH296_RS05575 (JH296_05565) | 1317070..1317561 | - | 492 | WP_011038220.1 | GNAT family N-acetyltransferase | Toxin Detail |
| JH296_RS05580 (JH296_05570) | 1317558..1317848 | - | 291 | WP_014508712.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| JH296_RS05585 (JH296_05575) | 1317924..1318351 | - | 428 | Protein_1077 | SymE family type I addiction module toxin | - |
| JH296_RS05590 (JH296_05580) | 1318990..1323750 | - | 4761 | WP_274497101.1 | Putative deoxyribonuclease RhsC | VF |
| JH296_RS05595 (JH296_05585) | 1323895..1324515 | - | 621 | WP_129588888.1 | dephospho-CoA kinase | - |
| JH296_RS05600 (JH296_05590) | 1324529..1325392 | - | 864 | WP_129588889.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| JH296_RS05605 (JH296_05595) | 1325399..1326655 | - | 1257 | WP_129589289.1 | Type II secretion system protein F | VF |
| JH296_RS05610 (JH296_05600) | 1327015..1327425 | + | 411 | WP_274497102.1 | pilin | - |
| JH296_RS05615 (JH296_05605) | 1327500..1327907 | + | 408 | WP_129588891.1 | pilin | - |
| JH296_RS05620 (JH296_05610) | 1328028..1329761 | + | 1734 | WP_274497103.1 | type IV-A pilus assembly ATPase PilB | - |
| JH296_RS05625 (JH296_05615) | 1330179..1331573 | - | 1395 | WP_165349438.1 | sigma-54 dependent transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|