MGE detailed information
MGE type: Genomic_island MGE length: 28374 bp
Accession: NZ_CP066981 Location: 1306674..1335047 Organism: Xanthomonas campestris pv. campestris strain 28-1 Replicon: chromosome
Accession: NZ_CP066981 Location: 1306674..1335047 Organism: Xanthomonas campestris pv. campestris strain 28-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JH301_RS05485 (JH301_05465) | 1302228..1303013 | - | 786 | WP_011038258.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| JH301_RS05490 (JH301_05470) | 1303159..1303953 | - | 795 | WP_011038257.1 | thiazole synthase | - |
| JH301_RS05495 (JH301_05475) | 1304002..1304202 | - | 201 | WP_012437546.1 | sulfur carrier protein ThiS | - |
| JH301_RS05500 (JH301_05480) | 1304391..1306175 | + | 1785 | WP_040940779.1 | autotransporter domain-containing esterase | - |
| JH301_RS05510 (JH301_05490) | 1306674..1307024 | + | 351 | WP_274316879.1 | hypothetical protein | - |
| JH301_RS05515 (JH301_05495) | 1307314..1307544 | - | 231 | WP_165349436.1 | hypothetical protein | - |
| JH301_RS05520 (JH301_05500) | 1307608..1307763 | + | 156 | WP_129588884.1 | hypothetical protein | - |
| JH301_RS05525 (JH301_05505) | 1307940..1308335 | + | 396 | WP_016945003.1 | hypothetical protein | - |
| JH301_RS05530 (JH301_05510) | 1308426..1308818 | + | 393 | WP_129588885.1 | H-NS family nucleoid-associated regulatory protein | - |
| JH301_RS05535 (JH301_05515) | 1309353..1311482 | - | 2130 | WP_129588886.1 | glycogen debranching protein GlgX | - |
| JH301_RS05540 (JH301_05520) | 1311975..1312850 | + | 876 | WP_011038222.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
| JH301_RS05545 (JH301_05525) | 1313500..1314177 | + | 678 | WP_003490678.1 | Transcriptional regulatory protein TcrA | VF |
| JH301_RS05550 (JH301_05530) | 1314170..1315504 | + | 1335 | WP_162808569.1 | HAMP domain-containing sensor histidine kinase | - |
| JH301_RS05555 (JH301_05535) | 1315647..1316138 | - | 492 | WP_011038220.1 | GNAT family N-acetyltransferase | Toxin Detail |
| JH301_RS05560 (JH301_05540) | 1316135..1316425 | - | 291 | WP_014508712.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| JH301_RS05565 (JH301_05545) | 1316501..1316928 | - | 428 | Protein_1074 | SymE family type I addiction module toxin | - |
| JH301_RS05570 (JH301_05550) | 1317567..1322327 | - | 4761 | WP_274497101.1 | Putative deoxyribonuclease RhsC | VF |
| JH301_RS05575 (JH301_05555) | 1322472..1323092 | - | 621 | WP_129588888.1 | dephospho-CoA kinase | - |
| JH301_RS05580 (JH301_05560) | 1323106..1323969 | - | 864 | WP_129588889.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| JH301_RS05585 (JH301_05565) | 1323976..1325178 | - | 1203 | WP_227971345.1 | Type II secretion system protein F | VF |
| JH301_RS05590 (JH301_05570) | 1325604..1326020 | + | 417 | WP_227971328.1 | Fimbrial protein | VF |
| JH301_RS05595 (JH301_05575) | 1326109..1326519 | + | 411 | WP_274316877.1 | pilin | - |
| JH301_RS05600 (JH301_05580) | 1326559..1328292 | + | 1734 | WP_227971327.1 | putative type II secretion system protein HxcR | VF |
| JH301_RS05605 (JH301_05585) | 1328710..1330104 | - | 1395 | WP_042594919.1 | Regulatory protein AtoC | VF |
| JH301_RS05610 (JH301_05590) | 1330314..1331924 | - | 1611 | WP_040940804.1 | Globin-coupled histidine kinase | VF |
| JH301_RS05615 (JH301_05595) | 1332158..1333327 | + | 1170 | WP_011038209.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| JH301_RS05620 (JH301_05600) | 1333352..1334227 | + | 876 | WP_274498718.1 | succinate--CoA ligase subunit alpha | - |
| JH301_RS05625 (JH301_05605) | 1334457..1334741 | + | 285 | WP_040942253.1 | CopG family transcriptional regulator | - |
| JH301_RS05630 (JH301_05610) | 1334745..1335047 | + | 303 | WP_011038207.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JH301_RS05635 (JH301_05615) | 1335047..1336702 | + | 1656 | WP_162808571.1 | NAD+ synthase | - |
| JH301_RS05640 (JH301_05620) | 1336696..1337682 | - | 987 | WP_050911329.1 | hypothetical protein | - |
| JH301_RS05645 (JH301_05625) | 1338134..1339015 | - | 882 | WP_011038204.1 | outer membrane protein assembly factor BamD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|