MGE detailed information
MGE type: Genomic_island MGE length: 55900 bp
Accession: NZ_CP066970 Location: 1228425..1284324 Organism: Xanthomonas campestris pv. campestris strain 11085 Replicon: chromosome
Accession: NZ_CP066970 Location: 1228425..1284324 Organism: Xanthomonas campestris pv. campestris strain 11085 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JH300_RS05130 (JH300_05105) | 1224042..1224827 | - | 786 | WP_011038258.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| JH300_RS05135 (JH300_05110) | 1224972..1225766 | - | 795 | WP_011038257.1 | thiazole synthase | - |
| JH300_RS05140 (JH300_05115) | 1225815..1226015 | - | 201 | WP_012437546.1 | sulfur carrier protein ThiS | - |
| JH300_RS05145 (JH300_05120) | 1226204..1227988 | + | 1785 | WP_057671619.1 | autotransporter domain-containing esterase | - |
| JH300_RS05155 (JH300_05130) | 1228425..1230305 | + | 1881 | WP_019237331.1 | Prophage integrase IntS ; Integrase | Integrase |
| JH300_RS05160 (JH300_05135) | 1230490..1230909 | + | 420 | WP_019237332.1 | hypothetical protein | - |
| JH300_RS05165 (JH300_05140) | 1230942..1231943 | + | 1002 | WP_274509914.1 | hypothetical protein | - |
| JH300_RS05170 (JH300_05145) | 1232014..1232664 | - | 651 | WP_011038252.1 | LysR substrate-binding domain-containing protein | - |
| JH300_RS05175 (JH300_05150) | 1232767..1233060 | + | 294 | WP_011038251.1 | hypothetical protein | VF |
| JH300_RS05180 (JH300_05155) | 1233088..1233972 | - | 885 | WP_057671621.1 | Hca operon transcriptional activator HcaR | VF |
| JH300_RS05185 (JH300_05160) | 1234725..1238825 | - | 4101 | WP_081020747.1 | HigA family addiction module antitoxin | - |
| JH300_RS05190 (JH300_05165) | 1239299..1242562 | - | 3264 | WP_057671623.1 | ATP-binding protein | - |
| JH300_RS05195 | 1242653..1242784 | + | 132 | Protein_1003 | IS5/IS1182 family transposase | - |
| JH300_RS05200 (JH300_05170) | 1243753..1245291 | + | 1539 | WP_011038243.1 | MASE1 domain-containing protein | - |
| JH300_RS05205 (JH300_05175) | 1246313..1246960 | + | 648 | WP_016848927.1 | hypothetical protein | - |
| JH300_RS05210 (JH300_05180) | 1246992..1248131 | + | 1140 | WP_017117946.1 | type IV secretion system protein | - |
| JH300_RS05215 (JH300_05185) | 1248209..1248748 | + | 540 | WP_225443876.1 | DUF4189 domain-containing protein | - |
| JH300_RS05220 (JH300_05190) | 1249146..1249676 | + | 531 | WP_011038239.1 | hypothetical protein | - |
| JH300_RS05225 (JH300_05195) | 1249673..1250332 | + | 660 | WP_057671625.1 | hypothetical protein | - |
| JH300_RS05230 (JH300_05200) | 1250329..1251711 | + | 1383 | WP_057671628.1 | hypothetical protein | - |
| JH300_RS05235 (JH300_05205) | 1251815..1252164 | + | 350 | Protein_1011 | hypothetical protein | VF |
| JH300_RS05240 (JH300_05210) | 1252751..1253895 | + | 1145 | WP_274349786.1 | IS3 family transposase ISXac3 | Transposase |
| JH300_RS05245 (JH300_05215) | 1254444..1254923 | + | 480 | WP_075286085.1 | DNA repair protein RadC | - |
| JH300_RS05250 (JH300_05220) | 1254994..1255185 | + | 192 | WP_221261829.1 | hypothetical protein | - |
| JH300_RS05255 (JH300_05225) | 1255819..1255974 | + | 156 | WP_186009287.1 | hypothetical protein | - |
| JH300_RS05260 (JH300_05230) | 1255967..1257388 | + | 1422 | WP_057671638.1 | hypothetical protein | - |
| JH300_RS05265 (JH300_05235) | 1257416..1257670 | - | 255 | WP_057671639.1 | hypothetical protein | - |
| JH300_RS05270 (JH300_05240) | 1257937..1259532 | + | 1596 | WP_192012501.1 | MobA/MobL family protein | - |
| JH300_RS05275 (JH300_05245) | 1259605..1259973 | - | 369 | WP_225443877.1 | transcriptional regulator | - |
| JH300_RS05280 (JH300_05250) | 1259981..1260262 | - | 282 | WP_011348355.1 | DUF6516 family protein | - |
| JH300_RS05285 (JH300_05255) | 1260328..1260669 | - | 342 | WP_081020748.1 | hypothetical protein | - |
| JH300_RS05290 (JH300_05260) | 1261395..1261745 | + | 351 | WP_225443878.1 | hypothetical protein | - |
| JH300_RS05295 (JH300_05265) | 1262045..1262275 | - | 231 | WP_157382680.1 | hypothetical protein | - |
| JH300_RS05300 (JH300_05270) | 1262339..1262485 | + | 147 | WP_040940792.1 | hypothetical protein | - |
| JH300_RS05305 (JH300_05275) | 1262670..1263065 | + | 396 | WP_042594933.1 | hypothetical protein | - |
| JH300_RS05310 (JH300_05280) | 1263156..1263548 | + | 393 | WP_012437593.1 | H-NS family nucleoid-associated regulatory protein | - |
| JH300_RS05315 (JH300_05285) | 1264083..1266212 | - | 2130 | WP_057671651.1 | glycogen debranching protein GlgX | - |
| JH300_RS05320 (JH300_05290) | 1266706..1267581 | + | 876 | WP_016945000.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
| JH300_RS05325 (JH300_05295) | 1268231..1268908 | + | 678 | WP_003490678.1 | Transcriptional regulatory protein TcrA | VF |
| JH300_RS05330 (JH300_05300) | 1268901..1270235 | + | 1335 | WP_057671653.1 | HAMP domain-containing sensor histidine kinase | - |
| JH300_RS05335 (JH300_05305) | 1270378..1270869 | - | 492 | WP_011038220.1 | GNAT family N-acetyltransferase | Toxin Detail |
| JH300_RS05340 (JH300_05310) | 1270866..1271156 | - | 291 | WP_011038219.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| JH300_RS05345 (JH300_05315) | 1271231..1271632 | - | 402 | WP_040940795.1 | SymE family type I addiction module toxin | - |
| JH300_RS05350 (JH300_05320) | 1272164..1272787 | - | 624 | WP_011038217.1 | dephospho-CoA kinase | - |
| JH300_RS05355 (JH300_05325) | 1272801..1273664 | - | 864 | WP_057671659.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| JH300_RS05360 (JH300_05330) | 1273671..1274933 | - | 1263 | WP_057671824.1 | Type II secretion system protein F | VF |
| JH300_RS05365 (JH300_05335) | 1275275..1275703 | + | 429 | WP_057671660.1 | Pilin-like competence factor ComP | VF |
| JH300_RS05370 (JH300_05340) | 1275839..1277569 | + | 1731 | WP_057671826.1 | putative type II secretion system protein HxcR | VF |
| JH300_RS05380 (JH300_05350) | 1277988..1279382 | - | 1395 | WP_057671663.1 | Regulatory protein AtoC | VF |
| JH300_RS05385 (JH300_05355) | 1279591..1281201 | - | 1611 | WP_057671664.1 | Globin-coupled histidine kinase | VF |
| JH300_RS05390 (JH300_05360) | 1281435..1282604 | + | 1170 | WP_011038209.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| JH300_RS05395 (JH300_05365) | 1282629..1283504 | + | 876 | WP_057671668.1 | succinate--CoA ligase subunit alpha | - |
| JH300_RS05400 (JH300_05370) | 1283734..1284018 | + | 285 | WP_040942253.1 | CopG family transcriptional regulator | - |
| JH300_RS05405 (JH300_05375) | 1284022..1284324 | + | 303 | WP_011038207.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JH300_RS05410 (JH300_05380) | 1284324..1285979 | + | 1656 | WP_057671669.1 | NAD+ synthase | - |
| JH300_RS05415 (JH300_05385) | 1285973..1286959 | - | 987 | WP_057671671.1 | hypothetical protein | - |
| JH300_RS05420 (JH300_05390) | 1287411..1288292 | - | 882 | WP_011038204.1 | outer membrane protein assembly factor BamD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|