MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 97609 bp
Accession: NZ_CP066969 Location: 1301099..1398707 Organism: Xanthomonas campestris strain 10-16 Replicon: chromosome
Accession: NZ_CP066969 Location: 1301099..1398707 Organism: Xanthomonas campestris strain 10-16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JH307_RS05860 (JH307_05855) | 1297132..1298190 | + | 1059 | WP_076039429.1 | endolytic transglycosylase MltG | - |
| JH307_RS05865 (JH307_05860) | 1298187..1299146 | + | 960 | WP_076039428.1 | DNA polymerase III subunit delta' | - |
| JH307_RS05870 (JH307_05865) | 1299143..1299496 | + | 354 | WP_011036225.1 | PilZ domain-containing protein | - |
| JH307_RS05880 (JH307_05875) | 1300050..1300274 | + | 225 | WP_076039427.1 | hypothetical protein | - |
| JH307_RS05885 (JH307_05880) | 1300482..1300811 | + | 330 | WP_014506900.1 | hypothetical protein | - |
| JH307_RS05890 (JH307_05885) | 1300906..1302507 | - | 1602 | WP_070692160.1 | propionate catabolism operon regulatory protein PrpR | - |
| JH307_RS05895 (JH307_05890) | 1302653..1303549 | + | 897 | WP_011036231.1 | methylisocitrate lyase | - |
| JH307_RS05900 (JH307_05895) | 1303625..1304779 | + | 1155 | WP_011036232.1 | 2-methylcitrate synthase | - |
| JH307_RS05905 (JH307_05900) | 1304971..1307565 | + | 2595 | WP_076039426.1 | Fe/S-dependent 2-methylisocitrate dehydratase AcnD | - |
| JH307_RS05910 (JH307_05905) | 1307661..1307894 | + | 234 | WP_016944831.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| JH307_RS05915 (JH307_05910) | 1307891..1308208 | + | 318 | WP_076039425.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JH307_RS05920 (JH307_05915) | 1308302..1309501 | + | 1200 | WP_076039424.1 | 2-methylaconitate cis-trans isomerase PrpF | - |
| JH307_RS05925 (JH307_05920) | 1309756..1311972 | + | 2217 | WP_070692164.1 | Pesticin receptor | VF |
| JH307_RS05930 (JH307_05925) | 1312046..1313047 | + | 1002 | WP_197708511.1 | nucleoside hydrolase | - |
| JH307_RS05935 (JH307_05930) | 1313815..1318731 | + | 4917 | WP_274509556.1 | alpha-2-macroglobulin | - |
| JH307_RS05940 (JH307_05935) | 1319089..1319556 | - | 468 | WP_070692167.1 | transposase | - |
| JH307_RS05945 (JH307_05940) | 1320328..1323414 | + | 3087 | WP_274509805.1 | TonB-dependent receptor | - |
| JH307_RS05950 (JH307_05945) | 1323518..1324465 | + | 948 | WP_162277205.1 | glycerophosphodiester phosphodiesterase family protein | - |
| JH307_RS05955 (JH307_05950) | 1324601..1325386 | + | 786 | WP_274339124.1 | CPBP family glutamic-type intramembrane protease | - |
| JH307_RS05960 (JH307_05955) | 1325491..1327914 | + | 2424 | WP_274509557.1 | penicillin-binding protein 1C | - |
| JH307_RS05965 (JH307_05960) | 1328544..1329104 | - | 561 | WP_076039417.1 | ferritin-like domain-containing protein | - |
| JH307_RS05970 (JH307_05965) | 1329147..1329629 | - | 483 | WP_014506917.1 | peroxiredoxin | - |
| JH307_RS05975 (JH307_05970) | 1329790..1330266 | + | 477 | WP_011036247.1 | Spore protein SP21 | VF |
| JH307_RS05980 (JH307_05975) | 1330409..1331299 | + | 891 | WP_014506919.1 | DnaJ C-terminal domain-containing protein | - |
| JH307_RS05985 (JH307_05980) | 1331616..1332002 | + | 387 | WP_011036249.1 | Response regulator PleD | VF |
| JH307_RS05990 (JH307_05985) | 1332934..1334076 | + | 1143 | WP_014506921.1 | FtsH protease activity modulator HflK | - |
| JH307_RS05995 (JH307_05990) | 1334076..1334939 | + | 864 | WP_011036251.1 | protease modulator HflC | - |
| JH307_RS06000 (JH307_05995) | 1335145..1335330 | + | 186 | WP_076039416.1 | DUF2065 family protein | - |
| JH307_RS06005 (JH307_06000) | 1335714..1337006 | + | 1293 | WP_011036253.1 | adenylosuccinate synthase | - |
| JH307_RS06010 (JH307_06005) | 1337174..1339846 | + | 2673 | WP_274509558.1 | M1 family metallopeptidase | - |
| JH307_RS06015 (JH307_06010) | 1339930..1340781 | + | 852 | WP_274509559.1 | hypothetical protein | - |
| JH307_RS06020 (JH307_06015) | 1340979..1341161 | - | 183 | WP_274509561.1 | hypothetical protein | - |
| JH307_RS06025 (JH307_06020) | 1341239..1342341 | + | 1103 | Protein_1150 | IS3 family transposase IS1404 | Transposase |
| JH307_RS06030 (JH307_06025) | 1342378..1342605 | + | 228 | Protein_1151 | hypothetical protein | VF |
| JH307_RS06035 (JH307_06030) | 1342650..1343111 | + | 462 | WP_043889145.1 | hypothetical protein | - |
| JH307_RS06040 (JH307_06035) | 1343137..1343595 | + | 459 | WP_084217866.1 | hypothetical protein | - |
| JH307_RS06045 (JH307_06040) | 1343592..1347275 | + | 3684 | WP_274509564.1 | peptidoglycan-binding protein | - |
| JH307_RS06050 (JH307_06045) | 1347579..1348877 | + | 1299 | WP_274509565.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| JH307_RS06055 (JH307_06050) | 1348874..1351087 | + | 2214 | WP_274509566.1 | peptidase domain-containing ABC transporter | - |
| JH307_RS06060 | 1351197..1351997 | + | 801 | WP_228441325.1 | hypothetical protein | - |
| JH307_RS06065 (JH307_06060) | 1352038..1352562 | + | 525 | WP_274509567.1 | hypothetical protein | - |
| JH307_RS06070 (JH307_06065) | 1352679..1353263 | + | 585 | WP_274509568.1 | hypothetical protein | - |
| JH307_RS06075 (JH307_06070) | 1353364..1354641 | - | 1278 | WP_274509569.1 | MFS transporter | - |
| JH307_RS06080 (JH307_06075) | 1354704..1355135 | - | 432 | WP_274509570.1 | toxin-activating lysine-acyltransferase | - |
| JH307_RS06085 (JH307_06080) | 1355125..1356939 | - | 1815 | WP_274509571.1 | protein adenylyltransferase SelO family protein | - |
| JH307_RS06090 (JH307_06085) | 1357440..1359083 | + | 1644 | WP_274509572.1 | MobA/MobL family protein | - |
| JH307_RS06095 (JH307_06090) | 1359493..1359839 | + | 347 | Protein_1164 | DUF1629 domain-containing protein | - |
| JH307_RS06100 (JH307_06095) | 1360964..1361440 | - | 477 | WP_274509573.1 | Mov34/MPN/PAD-1 family protein | - |
| JH307_RS06105 (JH307_06100) | 1361428..1363062 | - | 1635 | WP_274509574.1 | ThiF family adenylyltransferase | - |
| JH307_RS06110 (JH307_06105) | 1363059..1364195 | - | 1137 | WP_274509575.1 | CBASS cGAMP synthase | - |
| JH307_RS06115 (JH307_06110) | 1364205..1365191 | - | 987 | WP_274509576.1 | CBASS cGAMP-activated phospholipase | - |
| JH307_RS06120 (JH307_06115) | 1365198..1365422 | - | 225 | WP_274509577.1 | DUF2188 domain-containing protein | - |
| JH307_RS06125 (JH307_06120) | 1365694..1366086 | + | 393 | WP_274509578.1 | helix-turn-helix transcriptional regulator | - |
| JH307_RS06130 (JH307_06125) | 1366089..1366958 | + | 870 | WP_274509579.1 | ImmA/IrrE family metallo-endopeptidase | - |
| JH307_RS06135 (JH307_06130) | 1367422..1367793 | + | 372 | WP_076038482.1 | hypothetical protein | - |
| JH307_RS06140 | 1367926..1368267 | + | 342 | WP_228441887.1 | hypothetical protein | - |
| JH307_RS06145 (JH307_06140) | 1368358..1368531 | + | 174 | WP_228441890.1 | hypothetical protein | - |
| JH307_RS06150 (JH307_06145) | 1368716..1369111 | + | 396 | WP_011038225.1 | hypothetical protein | - |
| JH307_RS06155 (JH307_06150) | 1369202..1369594 | + | 393 | WP_076038484.1 | H-NS family nucleoid-associated regulatory protein | - |
| JH307_RS06160 (JH307_06155) | 1370127..1372256 | - | 2130 | WP_016945001.1 | glycogen debranching protein GlgX | - |
| JH307_RS06165 (JH307_06160) | 1372749..1373624 | + | 876 | WP_070689999.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
| JH307_RS06170 (JH307_06165) | 1374274..1374951 | + | 678 | WP_003490678.1 | Transcriptional regulatory protein TcrA | VF |
| JH307_RS06175 (JH307_06170) | 1374944..1376278 | + | 1335 | WP_019237347.1 | HAMP domain-containing sensor histidine kinase | - |
| JH307_RS06180 (JH307_06175) | 1376421..1376912 | - | 492 | WP_076038486.1 | GNAT family N-acetyltransferase | Toxin Detail |
| JH307_RS06185 (JH307_06180) | 1376909..1377199 | - | 291 | WP_011038219.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| JH307_RS06190 (JH307_06185) | 1377274..1377675 | - | 402 | WP_274509580.1 | SymE family type I addiction module toxin | - |
| JH307_RS06195 (JH307_06190) | 1378207..1378830 | - | 624 | WP_076038488.1 | dephospho-CoA kinase | - |
| JH307_RS06200 (JH307_06195) | 1378844..1379707 | - | 864 | WP_040940797.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| JH307_RS06205 (JH307_06200) | 1379714..1380970 | - | 1257 | WP_076037882.1 | Type II secretion system protein F | VF |
| JH307_RS06210 (JH307_06205) | 1381314..1381721 | + | 408 | WP_076038490.1 | Fimbrial protein | VF |
| JH307_RS06215 (JH307_06210) | 1381903..1383609 | + | 1707 | WP_206419582.1 | putative type II secretion system protein HxcR | VF |
| JH307_RS06220 (JH307_06215) | 1383792..1384529 | - | 738 | WP_070690009.1 | zeta toxin family protein | - |
| JH307_RS06225 (JH307_06220) | 1384529..1384891 | - | 363 | WP_217694196.1 | hypothetical protein | - |
| JH307_RS06230 (JH307_06225) | 1385083..1386477 | - | 1395 | WP_070690014.1 | Regulatory protein AtoC | VF |
| JH307_RS06235 (JH307_06230) | 1386686..1388296 | - | 1611 | WP_014508702.1 | Globin-coupled histidine kinase | VF |
| JH307_RS06240 (JH307_06235) | 1388530..1389699 | + | 1170 | WP_011038209.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| JH307_RS06245 (JH307_06240) | 1389724..1390599 | + | 876 | WP_011038208.1 | succinate--CoA ligase subunit alpha | - |
| JH307_RS06250 (JH307_06245) | 1390829..1391113 | + | 285 | WP_040942253.1 | CopG family transcriptional regulator | - |
| JH307_RS06255 (JH307_06250) | 1391117..1391419 | + | 303 | WP_011038207.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JH307_RS06260 (JH307_06255) | 1391419..1393074 | + | 1656 | WP_274509582.1 | NAD+ synthase | - |
| JH307_RS06265 (JH307_06260) | 1393068..1394051 | - | 984 | WP_274509583.1 | hypothetical protein | - |
| JH307_RS06270 (JH307_06265) | 1394502..1395383 | - | 882 | WP_011038204.1 | outer membrane protein assembly factor BamD | - |
| JH307_RS06275 (JH307_06270) | 1395506..1396501 | + | 996 | WP_076038496.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
| JH307_RS06280 (JH307_06275) | 1396503..1397303 | + | 801 | WP_274509584.1 | peptidoglycan editing factor PgeF | - |
| JH307_RS06285 (JH307_06280) | 1397324..1397830 | + | 507 | WP_076037045.1 | DUF4166 domain-containing protein | - |
| JH307_RS06290 (JH307_06285) | 1397817..1398236 | + | 420 | WP_011038200.1 | thiol-disulfide oxidoreductase DCC family protein | - |
| JH307_RS06295 (JH307_06290) | 1398611..1400479 | - | 1869 | WP_274509585.1 | methyl-accepting chemotaxis protein | - |
| JH307_RS06300 (JH307_06295) | 1401006..1403441 | - | 2436 | WP_176748121.1 | glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|