MGE detailed information
MGE type: Genomic_island MGE length: 27758 bp
Accession: NZ_CP066968 Location: 1143873..1171630 Organism: Xanthomonas campestris pv. incanae strain 16-8 Replicon: chromosome
Accession: NZ_CP066968 Location: 1143873..1171630 Organism: Xanthomonas campestris pv. incanae strain 16-8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JH274_RS04855 (JH274_04845) | 1139663..1140448 | - | 786 | WP_223646411.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| JH274_RS04860 (JH274_04850) | 1140594..1141388 | - | 795 | WP_011038257.1 | thiazole synthase | - |
| JH274_RS04865 (JH274_04855) | 1141437..1141637 | - | 201 | WP_274390774.1 | sulfur carrier protein ThiS | - |
| JH274_RS04870 (JH274_04860) | 1141826..1143610 | + | 1785 | WP_274396152.1 | autotransporter domain-containing protein | - |
| JH274_RS04880 (JH274_04870) | 1144832..1144987 | + | 156 | WP_011038226.1 | hypothetical protein | - |
| JH274_RS04885 (JH274_04875) | 1145163..1145558 | + | 396 | WP_042594933.1 | hypothetical protein | - |
| JH274_RS04890 (JH274_04880) | 1145649..1146041 | + | 393 | WP_011038224.1 | H-NS family nucleoid-associated regulatory protein | - |
| JH274_RS04895 (JH274_04885) | 1146559..1148688 | - | 2130 | WP_274394338.1 | glycogen debranching protein GlgX | - |
| JH274_RS04900 (JH274_04890) | 1149182..1150057 | + | 876 | WP_076054142.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
| JH274_RS04905 (JH274_04895) | 1150708..1151385 | + | 678 | WP_003490678.1 | Transcriptional regulatory protein TcrA | VF |
| JH274_RS04910 (JH274_04900) | 1151378..1152712 | + | 1335 | WP_019237347.1 | HAMP domain-containing sensor histidine kinase | - |
| JH274_RS04915 (JH274_04905) | 1152855..1153346 | - | 492 | WP_274395994.1 | GNAT family N-acetyltransferase | Toxin Detail |
| JH274_RS04920 (JH274_04910) | 1153343..1153633 | - | 291 | WP_011038219.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| JH274_RS04925 (JH274_04915) | 1153709..1154110 | - | 402 | WP_274395995.1 | SymE family type I addiction module toxin | - |
| JH274_RS04930 (JH274_04920) | 1154642..1155265 | - | 624 | WP_116670565.1 | dephospho-CoA kinase | - |
| JH274_RS04935 (JH274_04925) | 1155279..1156142 | - | 864 | WP_040940797.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| JH274_RS04940 (JH274_04930) | 1156149..1157408 | - | 1260 | WP_274395996.1 | Type II secretion system protein F | VF |
| JH274_RS04945 (JH274_04935) | 1157763..1158188 | + | 426 | WP_274395997.1 | Fimbrial protein | VF |
| JH274_RS04950 (JH274_04940) | 1158297..1159916 | + | 1620 | WP_274395998.1 | phosphoethanolamine transferase | - |
| JH274_RS04955 (JH274_04945) | 1159927..1160556 | + | 630 | WP_012437604.1 | hypothetical protein | - |
| JH274_RS04960 (JH274_04950) | 1160553..1162052 | + | 1500 | WP_274395999.1 | hypothetical protein | - |
| JH274_RS04965 (JH274_04955) | 1162087..1163820 | + | 1734 | WP_274396000.1 | putative type II secretion system protein HxcR | VF |
| JH274_RS04970 (JH274_04960) | 1164003..1164740 | - | 738 | WP_070690009.1 | zeta toxin family protein | - |
| JH274_RS04975 (JH274_04965) | 1164740..1165096 | - | 357 | WP_139328384.1 | hypothetical protein | - |
| JH274_RS04980 (JH274_04970) | 1165294..1166688 | - | 1395 | WP_070690014.1 | Regulatory protein AtoC | VF |
| JH274_RS04985 (JH274_04975) | 1166897..1168507 | - | 1611 | WP_274396002.1 | Globin-coupled histidine kinase | VF |
| JH274_RS04990 (JH274_04980) | 1168741..1169910 | + | 1170 | WP_011038209.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| JH274_RS04995 (JH274_04985) | 1169935..1170810 | + | 876 | WP_011038208.1 | succinate--CoA ligase subunit alpha | - |
| JH274_RS05000 (JH274_04990) | 1171040..1171324 | + | 285 | WP_040942253.1 | CopG family transcriptional regulator | - |
| JH274_RS05005 (JH274_04995) | 1171328..1171630 | + | 303 | WP_011038207.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JH274_RS05010 (JH274_05000) | 1171630..1173285 | + | 1656 | WP_057671669.1 | NAD+ synthase | - |
| JH274_RS05015 (JH274_05005) | 1173279..1174274 | - | 996 | WP_274396003.1 | hypothetical protein | - |
| JH274_RS05020 (JH274_05010) | 1174725..1175606 | - | 882 | WP_042594911.1 | outer membrane protein assembly factor BamD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|