MGE detailed information
MGE type: Genomic_island MGE length: 95315 bp
Accession: NZ_CP066949 Location: 1160910..1256224 Organism: Xanthomonas campestris pv. campestris strain 0659 Replicon: chromosome
Accession: NZ_CP066949 Location: 1160910..1256224 Organism: Xanthomonas campestris pv. campestris strain 0659 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JH278_RS04880 (JH278_04870) | 1156298..1156768 | + | 471 | WP_011038298.1 | hypothetical protein | - |
| JH278_RS04885 (JH278_04875) | 1156959..1157939 | - | 981 | WP_012438063.1 | IS5-like element IS1646 family transposase | - |
| JH278_RS04890 (JH278_04880) | 1157967..1158383 | + | 417 | WP_274375506.1 | hypothetical protein | - |
| JH278_RS04895 (JH278_04885) | 1158587..1159069 | + | 483 | WP_274375507.1 | hypothetical protein | - |
| JH278_RS04900 (JH278_04890) | 1159032..1159964 | - | 933 | WP_274375508.1 | hypothetical protein | - |
| JH278_RS04910 (JH278_04900) | 1161218..1162135 | - | 918 | WP_274375509.1 | ATP-binding protein | - |
| JH278_RS04915 | 1162132..1165338 | - | 3207 | WP_274375510.1 | TerB N-terminal domain-containing protein | - |
| JH278_RS04920 (JH278_04910) | 1165514..1168087 | + | 2574 | WP_081020869.1 | AAA family ATPase | - |
| JH278_RS04925 (JH278_04915) | 1168199..1169275 | - | 1077 | WP_274375511.1 | hypothetical protein | - |
| JH278_RS04930 (JH278_04920) | 1169813..1171204 | - | 1392 | WP_249453410.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| JH278_RS04935 (JH278_04925) | 1171878..1173022 | + | 1145 | WP_087942071.1 | IS3 family transposase ISXac3 | Transposase |
| JH278_RS04940 (JH278_04930) | 1173335..1175023 | + | 1689 | WP_233362759.1 | Protein VirD4 | VF |
| JH278_RS04945 (JH278_04935) | 1175035..1175706 | + | 672 | WP_274375512.1 | DUF1629 domain-containing protein | - |
| JH278_RS04950 (JH278_04940) | 1175747..1176385 | + | 639 | WP_233362757.1 | DUF1629 domain-containing protein | - |
| JH278_RS04955 (JH278_04945) | 1176433..1180035 | + | 3603 | WP_274375513.1 | peptidoglycan-binding protein | - |
| JH278_RS04960 (JH278_04950) | 1180271..1181569 | + | 1299 | WP_043877774.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| JH278_RS04965 (JH278_04955) | 1181566..1183782 | + | 2217 | WP_274375514.1 | peptidase domain-containing ABC transporter | - |
| JH278_RS04970 (JH278_04960) | 1183885..1184697 | + | 813 | WP_274375515.1 | pesticin C-terminus-like muramidase | - |
| JH278_RS04975 (JH278_04965) | 1184727..1185221 | + | 495 | WP_274375516.1 | hypothetical protein | - |
| JH278_RS04980 (JH278_04975) | 1185421..1186191 | + | 771 | WP_274375517.1 | hypothetical protein | - |
| JH278_RS04985 (JH278_04980) | 1186258..1186896 | + | 639 | WP_139328711.1 | hypothetical protein | - |
| JH278_RS04990 (JH278_04985) | 1186940..1187464 | + | 525 | WP_076038855.1 | hypothetical protein | - |
| JH278_RS04995 (JH278_04990) | 1187581..1187763 | + | 183 | WP_274375518.1 | hypothetical protein | - |
| JH278_RS05000 (JH278_04995) | 1187870..1189237 | + | 1368 | WP_011035783.1 | IS5 family transposase IS1478 | Transposase |
| JH278_RS05005 (JH278_05000) | 1189654..1191021 | + | 1368 | WP_011035783.1 | IS5 family transposase IS1478 | Transposase |
| JH278_RS05010 (JH278_05005) | 1191438..1192805 | + | 1368 | WP_011035783.1 | IS5 family transposase IS1478 | Transposase |
| JH278_RS05015 (JH278_05010) | 1193346..1194623 | - | 1278 | WP_131084748.1 | ABC transporter permease | - |
| JH278_RS05020 (JH278_05015) | 1194686..1195117 | - | 432 | WP_274375519.1 | Leukotoxin-activating lysine-acyltransferase LtxC | VF |
| JH278_RS05025 (JH278_05020) | 1195107..1196921 | - | 1815 | WP_274375520.1 | protein adenylyltransferase SelO family protein | - |
| JH278_RS05030 (JH278_05025) | 1197417..1199060 | + | 1644 | WP_274375521.1 | MobA/MobL family protein | - |
| JH278_RS05035 (JH278_05030) | 1199165..1200265 | - | 1101 | WP_076038478.1 | XRE family transcriptional regulator | - |
| JH278_RS05040 (JH278_05035) | 1200262..1200858 | - | 597 | WP_076038479.1 | hypothetical protein | - |
| JH278_RS05045 (JH278_05040) | 1201188..1202737 | + | 1550 | Protein_979 | Tyrosine recombinase XerD ; Integrase | Integrase |
| JH278_RS05050 (JH278_05045) | 1202818..1203246 | + | 429 | WP_144410827.1 | hypothetical protein | - |
| JH278_RS05055 (JH278_05050) | 1203632..1204420 | - | 789 | WP_144410826.1 | hypothetical protein | - |
| JH278_RS05060 (JH278_05055) | 1205019..1205839 | + | 821 | Protein_982 | IS3 family transposase ISXca1 | Transposase |
| JH278_RS05065 (JH278_05060) | 1205908..1207010 | + | 1103 | WP_100101058.1 | IS3 family transposase IS1404 | Transposase |
| JH278_RS05070 (JH278_05065) | 1207485..1208069 | + | 585 | WP_274375522.1 | hypothetical protein | - |
| JH278_RS05075 (JH278_05070) | 1208307..1208546 | + | 240 | WP_274375523.1 | hypothetical protein | - |
| JH278_RS05080 | 1208829..1209056 | + | 228 | Protein_986 | DNA repair protein RadC | - |
| JH278_RS05085 (JH278_05080) | 1209173..1210153 | - | 981 | WP_012438063.1 | IS5 family transposase IS1646 | Transposase |
| JH278_RS05090 (JH278_05085) | 1210241..1210555 | + | 315 | Protein_988 | JAB domain-containing protein | - |
| JH278_RS05095 (JH278_05090) | 1210628..1211782 | + | 1155 | WP_274339168.1 | XRE family transcriptional regulator | - |
| JH278_RS05100 (JH278_05095) | 1212263..1212841 | + | 579 | Protein_990 | thermonuclease family protein | - |
| JH278_RS05105 (JH278_05100) | 1212975..1213616 | + | 642 | WP_274375524.1 | DUF1629 domain-containing protein | - |
| JH278_RS05110 (JH278_05105) | 1213653..1217693 | + | 4041 | WP_274375525.1 | hypothetical protein | - |
| JH278_RS05115 (JH278_05110) | 1217733..1218383 | + | 651 | WP_274375526.1 | hypothetical protein | - |
| JH278_RS05120 (JH278_05115) | 1219100..1220314 | - | 1215 | WP_011035386.1 | IS4 family transposase IS1481A | Transposase |
| JH278_RS05125 (JH278_05120) | 1220382..1221191 | - | 810 | WP_274375787.1 | caspase family protein | - |
| JH278_RS05130 (JH278_05125) | 1221233..1221601 | - | 369 | WP_274339164.1 | hypothetical protein | - |
| JH278_RS05135 (JH278_05130) | 1221768..1223135 | + | 1368 | WP_011035783.1 | IS5 family transposase IS1478 | Transposase |
| JH278_RS05145 | 1224882..1225175 | + | 294 | Protein_999 | MobA/MobL family protein | - |
| JH278_RS05150 (JH278_05140) | 1225206..1226366 | + | 1161 | WP_274375746.1 | plasmid mobilization protein | - |
| JH278_RS05155 (JH278_05145) | 1226311..1226805 | - | 495 | WP_274375528.1 | transcriptional regulator | - |
| JH278_RS05160 (JH278_05150) | 1227019..1227999 | - | 981 | WP_012438063.1 | IS5 family transposase IS1646 | Transposase |
| JH278_RS05165 (JH278_05155) | 1228003..1228257 | - | 255 | WP_274375529.1 | DUF6516 family protein | - |
| JH278_RS05170 (JH278_05160) | 1228322..1228663 | - | 342 | WP_070689991.1 | hypothetical protein | - |
| JH278_RS05175 (JH278_05165) | 1229035..1230249 | + | 1215 | WP_011035386.1 | IS4 family transposase IS1481A | Transposase |
| JH278_RS05180 (JH278_05170) | 1230719..1231090 | + | 372 | WP_274375530.1 | hypothetical protein | - |
| JH278_RS05185 | 1231223..1231564 | + | 342 | WP_228441887.1 | hypothetical protein | - |
| JH278_RS05190 (JH278_05180) | 1231682..1231828 | + | 147 | WP_116889157.1 | hypothetical protein | - |
| JH278_RS05195 (JH278_05185) | 1232013..1232408 | + | 396 | WP_274375531.1 | hypothetical protein | - |
| JH278_RS05200 (JH278_05190) | 1232499..1232891 | + | 393 | WP_012437593.1 | H-NS family nucleoid-associated regulatory protein | - |
| JH278_RS05205 (JH278_05195) | 1233416..1235545 | - | 2130 | WP_057671651.1 | glycogen debranching protein GlgX | - |
| JH278_RS05210 (JH278_05200) | 1236038..1236913 | + | 876 | WP_011038222.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
| JH278_RS05215 (JH278_05205) | 1237563..1238240 | + | 678 | WP_003490678.1 | Transcriptional regulatory protein TcrA | VF |
| JH278_RS05220 (JH278_05210) | 1238233..1239567 | + | 1335 | WP_227971331.1 | HAMP domain-containing sensor histidine kinase | - |
| JH278_RS05225 (JH278_05215) | 1239710..1240201 | - | 492 | WP_011038220.1 | GNAT family N-acetyltransferase | Toxin Detail |
| JH278_RS05230 (JH278_05220) | 1240198..1240488 | - | 291 | WP_274375532.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| JH278_RS05235 (JH278_05225) | 1240564..1240965 | - | 402 | WP_076037054.1 | SymE family type I addiction module toxin | - |
| JH278_RS05240 (JH278_05230) | 1241497..1242120 | - | 624 | WP_040940796.1 | dephospho-CoA kinase | - |
| JH278_RS05245 (JH278_05235) | 1242134..1242997 | - | 864 | WP_057671659.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| JH278_RS05250 (JH278_05240) | 1243004..1244266 | - | 1263 | WP_057671824.1 | Type II secretion system protein F | VF |
| JH278_RS05255 (JH278_05245) | 1244608..1245036 | + | 429 | WP_057671660.1 | Pilin-like competence factor ComP | VF |
| JH278_RS05260 (JH278_05250) | 1245136..1246503 | - | 1368 | WP_011035783.1 | IS5 family transposase IS1478 | Transposase |
| JH278_RS05265 (JH278_05255) | 1246684..1248414 | + | 1731 | WP_274375747.1 | putative type II secretion system protein HxcR | VF |
| JH278_RS05270 (JH278_05260) | 1248597..1248812 | - | 216 | WP_274375533.1 | hypothetical protein | - |
| JH278_RS05275 (JH278_05265) | 1248894..1249334 | - | 441 | WP_274375534.1 | hypothetical protein | - |
| JH278_RS05280 (JH278_05270) | 1249334..1249696 | - | 363 | WP_217694196.1 | hypothetical protein | - |
| JH278_RS05285 (JH278_05275) | 1249888..1251282 | - | 1395 | WP_043921909.1 | Regulatory protein AtoC | VF |
| JH278_RS05290 (JH278_05280) | 1251491..1253101 | - | 1611 | WP_011038210.1 | Globin-coupled histidine kinase | VF |
| JH278_RS05295 (JH278_05285) | 1253335..1254504 | + | 1170 | WP_012437609.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| JH278_RS05300 (JH278_05290) | 1254529..1255404 | + | 876 | WP_011038208.1 | succinate--CoA ligase subunit alpha | - |
| JH278_RS05305 (JH278_05295) | 1255634..1255918 | + | 285 | WP_040942253.1 | CopG family transcriptional regulator | - |
| JH278_RS05310 (JH278_05300) | 1255922..1256224 | + | 303 | WP_011038207.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JH278_RS05315 (JH278_05305) | 1256224..1257879 | + | 1656 | WP_057671669.1 | NAD+ synthase | - |
| JH278_RS05320 (JH278_05310) | 1257854..1258846 | - | 993 | WP_274375748.1 | hypothetical protein | - |
| JH278_RS05325 (JH278_05315) | 1259303..1260184 | - | 882 | WP_267314856.1 | outer membrane protein assembly factor BamD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|