MGE detailed information
MGE type: Genomic_island MGE length: 95315 bp
Accession: NZ_CP066947 Location: 1160904..1256218 Organism: Xanthomonas campestris pv. campestris strain 0792 Replicon: chromosome
Accession: NZ_CP066947 Location: 1160904..1256218 Organism: Xanthomonas campestris pv. campestris strain 0792 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JH257_RS04875 (JH257_04875) | 1156292..1156762 | + | 471 | WP_011038298.1 | hypothetical protein | - |
| JH257_RS04880 (JH257_04880) | 1156953..1157933 | - | 981 | WP_012438063.1 | IS5-like element IS1646 family transposase | - |
| JH257_RS04885 (JH257_04885) | 1157961..1158377 | + | 417 | WP_274375506.1 | hypothetical protein | - |
| JH257_RS04890 (JH257_04890) | 1158581..1159063 | + | 483 | WP_274375507.1 | hypothetical protein | - |
| JH257_RS04895 (JH257_04895) | 1159026..1159958 | - | 933 | WP_274375508.1 | hypothetical protein | - |
| JH257_RS04905 (JH257_04905) | 1161212..1162129 | - | 918 | WP_274375509.1 | ATP-binding protein | - |
| JH257_RS04910 | 1162126..1165332 | - | 3207 | WP_274375510.1 | TerB N-terminal domain-containing protein | - |
| JH257_RS04915 (JH257_04915) | 1165508..1168081 | + | 2574 | WP_081020869.1 | AAA family ATPase | - |
| JH257_RS04920 (JH257_04920) | 1168193..1169269 | - | 1077 | WP_274375511.1 | hypothetical protein | - |
| JH257_RS04925 (JH257_04925) | 1169807..1171198 | - | 1392 | WP_249453410.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| JH257_RS04930 (JH257_04930) | 1171872..1173016 | + | 1145 | WP_087942071.1 | IS3 family transposase ISXac3 | Transposase |
| JH257_RS04935 (JH257_04935) | 1173329..1175017 | + | 1689 | WP_233362759.1 | Protein VirD4 | VF |
| JH257_RS04940 (JH257_04940) | 1175029..1175700 | + | 672 | WP_274375512.1 | DUF1629 domain-containing protein | - |
| JH257_RS04945 (JH257_04945) | 1175741..1176379 | + | 639 | WP_233362757.1 | DUF1629 domain-containing protein | - |
| JH257_RS04950 (JH257_04950) | 1176427..1180029 | + | 3603 | WP_274375513.1 | peptidoglycan-binding protein | - |
| JH257_RS04955 (JH257_04955) | 1180265..1181563 | + | 1299 | WP_043877774.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| JH257_RS04960 (JH257_04960) | 1181560..1183776 | + | 2217 | WP_274375514.1 | peptidase domain-containing ABC transporter | - |
| JH257_RS04965 (JH257_04965) | 1183879..1184691 | + | 813 | WP_274375515.1 | pesticin C-terminus-like muramidase | - |
| JH257_RS04970 (JH257_04970) | 1184721..1185215 | + | 495 | WP_274375516.1 | hypothetical protein | - |
| JH257_RS04975 (JH257_04980) | 1185415..1186185 | + | 771 | WP_274375517.1 | hypothetical protein | - |
| JH257_RS04980 (JH257_04985) | 1186252..1186890 | + | 639 | WP_139328711.1 | hypothetical protein | - |
| JH257_RS04985 (JH257_04990) | 1186934..1187458 | + | 525 | WP_076038855.1 | hypothetical protein | - |
| JH257_RS04990 (JH257_04995) | 1187575..1187757 | + | 183 | WP_274375518.1 | hypothetical protein | - |
| JH257_RS04995 (JH257_05000) | 1187864..1189231 | + | 1368 | WP_011035783.1 | IS5 family transposase IS1478 | Transposase |
| JH257_RS05000 (JH257_05005) | 1189376..1190743 | + | 1368 | WP_011035783.1 | IS5 family transposase IS1478 | Transposase |
| JH257_RS05005 (JH257_05010) | 1191160..1192527 | + | 1368 | WP_011035783.1 | IS5 family transposase IS1478 | Transposase |
| JH257_RS05010 (JH257_05015) | 1192944..1194311 | + | 1368 | WP_011035783.1 | IS5 family transposase IS1478 | Transposase |
| JH257_RS05015 (JH257_05020) | 1194852..1196129 | - | 1278 | WP_131084748.1 | ABC transporter permease | - |
| JH257_RS05020 (JH257_05025) | 1196192..1196623 | - | 432 | WP_274375519.1 | Leukotoxin-activating lysine-acyltransferase LtxC | VF |
| JH257_RS05025 (JH257_05030) | 1196613..1198427 | - | 1815 | WP_274375520.1 | protein adenylyltransferase SelO family protein | - |
| JH257_RS05030 (JH257_05035) | 1198923..1200566 | + | 1644 | WP_274375521.1 | MobA/MobL family protein | - |
| JH257_RS05035 (JH257_05040) | 1200671..1201771 | - | 1101 | WP_076038478.1 | XRE family transcriptional regulator | - |
| JH257_RS05040 (JH257_05045) | 1201768..1202364 | - | 597 | WP_076038479.1 | hypothetical protein | - |
| JH257_RS05045 (JH257_05050) | 1202694..1204243 | + | 1550 | Protein_979 | Tyrosine recombinase XerD ; Integrase | Integrase |
| JH257_RS05050 (JH257_05055) | 1204324..1204752 | + | 429 | WP_144410827.1 | hypothetical protein | - |
| JH257_RS05055 (JH257_05060) | 1205138..1205926 | - | 789 | WP_144410826.1 | hypothetical protein | - |
| JH257_RS05060 (JH257_05065) | 1206525..1207345 | + | 821 | Protein_982 | IS3 family transposase ISXca1 | Transposase |
| JH257_RS05065 (JH257_05070) | 1207414..1208516 | + | 1103 | WP_100101058.1 | IS3 family transposase IS1404 | Transposase |
| JH257_RS05070 (JH257_05075) | 1208991..1209575 | + | 585 | WP_274375522.1 | hypothetical protein | - |
| JH257_RS05075 (JH257_05080) | 1209813..1210052 | + | 240 | WP_274375523.1 | hypothetical protein | - |
| JH257_RS05080 | 1210335..1210562 | + | 228 | Protein_986 | DNA repair protein RadC | - |
| JH257_RS05085 (JH257_05090) | 1210679..1211659 | - | 981 | WP_012438063.1 | IS5 family transposase IS1646 | Transposase |
| JH257_RS05090 (JH257_05095) | 1211747..1212061 | + | 315 | Protein_988 | JAB domain-containing protein | - |
| JH257_RS05095 (JH257_05100) | 1212134..1213288 | + | 1155 | WP_274339168.1 | XRE family transcriptional regulator | - |
| JH257_RS05100 (JH257_05105) | 1213769..1214347 | + | 579 | Protein_990 | thermonuclease family protein | - |
| JH257_RS05105 (JH257_05110) | 1214481..1215122 | + | 642 | WP_274375524.1 | DUF1629 domain-containing protein | - |
| JH257_RS05110 (JH257_05115) | 1215159..1219199 | + | 4041 | WP_274375525.1 | hypothetical protein | - |
| JH257_RS05115 (JH257_05120) | 1219239..1219889 | + | 651 | WP_274375526.1 | hypothetical protein | - |
| JH257_RS05120 (JH257_05125) | 1220606..1221820 | - | 1215 | WP_011035386.1 | IS4 family transposase IS1481A | Transposase |
| JH257_RS05125 (JH257_05130) | 1221888..1222742 | - | 855 | WP_274375527.1 | caspase family protein | - |
| JH257_RS05130 (JH257_05135) | 1222739..1223107 | - | 369 | WP_274339164.1 | hypothetical protein | - |
| JH257_RS05135 (JH257_05140) | 1223274..1224641 | + | 1368 | WP_011035783.1 | IS5 family transposase IS1478 | Transposase |
| JH257_RS05145 | 1226388..1226681 | + | 294 | Protein_999 | MobA/MobL family protein | - |
| JH257_RS05150 (JH257_05150) | 1226712..1227872 | + | 1161 | WP_274375746.1 | plasmid mobilization protein | - |
| JH257_RS05155 (JH257_05155) | 1227817..1228311 | - | 495 | WP_274375528.1 | transcriptional regulator | - |
| JH257_RS05160 (JH257_05160) | 1228525..1229505 | - | 981 | WP_012438063.1 | IS5 family transposase IS1646 | Transposase |
| JH257_RS05165 (JH257_05165) | 1229509..1229763 | - | 255 | WP_274375529.1 | DUF6516 family protein | - |
| JH257_RS05170 (JH257_05170) | 1229828..1230169 | - | 342 | WP_070689991.1 | hypothetical protein | - |
| JH257_RS05175 (JH257_05175) | 1230541..1231755 | + | 1215 | WP_011035386.1 | IS4 family transposase IS1481A | Transposase |
| JH257_RS05180 (JH257_05180) | 1232225..1232596 | + | 372 | WP_274375530.1 | hypothetical protein | - |
| JH257_RS05185 | 1232729..1233070 | + | 342 | WP_228441887.1 | hypothetical protein | - |
| JH257_RS05190 (JH257_05190) | 1233188..1233334 | + | 147 | WP_116889157.1 | hypothetical protein | - |
| JH257_RS05195 (JH257_05195) | 1233519..1233914 | + | 396 | WP_274375531.1 | hypothetical protein | - |
| JH257_RS05200 (JH257_05200) | 1234005..1234397 | + | 393 | WP_012437593.1 | H-NS family nucleoid-associated regulatory protein | - |
| JH257_RS05205 (JH257_05205) | 1234922..1237051 | - | 2130 | WP_057671651.1 | glycogen debranching protein GlgX | - |
| JH257_RS05210 (JH257_05210) | 1237544..1238419 | + | 876 | WP_011038222.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
| JH257_RS05215 (JH257_05215) | 1239069..1239746 | + | 678 | WP_003490678.1 | Transcriptional regulatory protein TcrA | VF |
| JH257_RS05220 (JH257_05220) | 1239739..1241073 | + | 1335 | WP_227971331.1 | HAMP domain-containing sensor histidine kinase | - |
| JH257_RS05225 (JH257_05225) | 1241216..1241707 | - | 492 | WP_011038220.1 | GNAT family N-acetyltransferase | Toxin Detail |
| JH257_RS05230 (JH257_05230) | 1241704..1241994 | - | 291 | WP_274375532.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| JH257_RS05235 (JH257_05235) | 1242070..1242471 | - | 402 | WP_076037054.1 | SymE family type I addiction module toxin | - |
| JH257_RS05240 (JH257_05240) | 1243003..1243626 | - | 624 | WP_040940796.1 | dephospho-CoA kinase | - |
| JH257_RS05245 (JH257_05245) | 1243640..1244503 | - | 864 | WP_057671659.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| JH257_RS05250 (JH257_05250) | 1244510..1245772 | - | 1263 | WP_057671824.1 | Type II secretion system protein F | VF |
| JH257_RS05255 (JH257_05255) | 1246114..1246542 | + | 429 | WP_057671660.1 | Pilin-like competence factor ComP | VF |
| JH257_RS05260 (JH257_05260) | 1246678..1248408 | + | 1731 | WP_274375747.1 | putative type II secretion system protein HxcR | VF |
| JH257_RS05265 (JH257_05265) | 1248591..1248806 | - | 216 | WP_274375533.1 | hypothetical protein | - |
| JH257_RS05270 (JH257_05270) | 1248888..1249328 | - | 441 | WP_274375534.1 | hypothetical protein | - |
| JH257_RS05275 (JH257_05275) | 1249328..1249690 | - | 363 | WP_217694196.1 | hypothetical protein | - |
| JH257_RS05280 (JH257_05280) | 1249882..1251276 | - | 1395 | WP_043921909.1 | Regulatory protein AtoC | VF |
| JH257_RS05285 (JH257_05285) | 1251485..1253095 | - | 1611 | WP_011038210.1 | Globin-coupled histidine kinase | VF |
| JH257_RS05290 (JH257_05290) | 1253329..1254498 | + | 1170 | WP_012437609.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| JH257_RS05295 (JH257_05295) | 1254523..1255398 | + | 876 | WP_011038208.1 | succinate--CoA ligase subunit alpha | - |
| JH257_RS05300 (JH257_05300) | 1255628..1255912 | + | 285 | WP_040942253.1 | CopG family transcriptional regulator | - |
| JH257_RS05305 (JH257_05305) | 1255916..1256218 | + | 303 | WP_011038207.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JH257_RS05310 (JH257_05310) | 1256218..1257873 | + | 1656 | WP_057671669.1 | NAD+ synthase | - |
| JH257_RS05315 (JH257_05315) | 1257848..1258840 | - | 993 | WP_274375748.1 | hypothetical protein | - |
| JH257_RS05320 (JH257_05320) | 1259297..1260178 | - | 882 | WP_267314856.1 | outer membrane protein assembly factor BamD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|