MGE detailed information
MGE type: Genomic_island MGE length: 49404 bp
Accession: NZ_CP066931 Location: 2567596..2616999 Organism: Xanthomonas campestris pv. raphani strain 609 Replicon: chromosome
Accession: NZ_CP066931 Location: 2567596..2616999 Organism: Xanthomonas campestris pv. raphani strain 609 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JH270_RS10850 (JH270_10865) | 2562864..2563271 | - | 408 | WP_274340470.1 | hypothetical protein | - |
| JH270_RS10855 (JH270_10870) | 2563398..2566460 | - | 3063 | WP_274340471.1 | TonB-dependent receptor | - |
| JH270_RS10860 (JH270_10875) | 2566566..2567615 | - | 1050 | WP_274340472.1 | FecR domain-containing protein | - |
| JH270_RS10865 (JH270_10880) | 2567596..2568171 | - | 576 | WP_274340473.1 | sigma-70 family RNA polymerase sigma factor | - |
| JH270_RS10870 (JH270_10885) | 2568383..2569045 | + | 663 | WP_274340474.1 | response regulator transcription factor | - |
| JH270_RS10875 (JH270_10890) | 2569192..2569776 | - | 585 | WP_274340475.1 | hypothetical protein | - |
| JH270_RS10880 (JH270_10895) | 2569884..2570312 | - | 429 | WP_274340476.1 | hypothetical protein | - |
| JH270_RS10885 (JH270_10900) | 2570505..2570855 | - | 351 | WP_274340477.1 | hypothetical protein | - |
| JH270_RS10890 (JH270_10905) | 2571231..2571686 | + | 456 | WP_228316155.1 | hypothetical protein | - |
| JH270_RS10895 (JH270_10910) | 2571929..2574295 | + | 2367 | WP_274340478.1 | TonB-dependent siderophore receptor | - |
| JH270_RS10900 (JH270_10915) | 2574518..2576752 | + | 2235 | WP_274340479.1 | Actin cross-linking toxin VgrG1 | VF |
| JH270_RS10905 (JH270_10920) | 2576762..2578102 | + | 1341 | WP_274340480.1 | DUF2169 domain-containing protein | - |
| JH270_RS10910 (JH270_10925) | 2578092..2578451 | + | 360 | WP_228316159.1 | DUF4150 domain-containing protein | - |
| JH270_RS10915 (JH270_10930) | 2578458..2579456 | + | 999 | WP_274340481.1 | hypothetical protein | - |
| JH270_RS10920 (JH270_10935) | 2579453..2579923 | + | 471 | WP_274340482.1 | hypothetical protein | - |
| JH270_RS10925 (JH270_10940) | 2579934..2580404 | + | 471 | WP_274340483.1 | hypothetical protein | - |
| JH270_RS10930 (JH270_10945) | 2580425..2581555 | + | 1131 | WP_274340484.1 | hypothetical protein | - |
| JH270_RS10935 (JH270_10950) | 2581699..2582061 | + | 363 | WP_274340485.1 | hypothetical protein | - |
| JH270_RS10940 (JH270_10955) | 2582295..2583155 | + | 861 | WP_274340486.1 | AP2 domain-containing protein | - |
| JH270_RS10945 (JH270_10960) | 2583164..2583427 | - | 264 | WP_228316165.1 | hypothetical protein | - |
| JH270_RS10950 (JH270_10965) | 2583823..2584785 | + | 963 | WP_274340487.1 | hypothetical protein | - |
| JH270_RS10955 (JH270_10970) | 2584955..2585572 | - | 618 | WP_274340488.1 | hypothetical protein | - |
| JH270_RS10960 (JH270_10975) | 2585678..2586304 | - | 627 | WP_274340489.1 | LysE family translocator | - |
| JH270_RS10965 (JH270_10980) | 2586400..2586735 | - | 336 | WP_274340490.1 | hypothetical protein | - |
| JH270_RS10970 (JH270_10985) | 2586732..2587364 | - | 633 | WP_274340491.1 | hypothetical protein | - |
| JH270_RS10975 (JH270_10990) | 2587556..2588785 | + | 1230 | WP_274340492.1 | DUF1444 family protein | - |
| JH270_RS10980 (JH270_10995) | 2589063..2589494 | + | 432 | WP_274340493.1 | hypothetical protein | - |
| JH270_RS10985 (JH270_11000) | 2589502..2589972 | + | 471 | WP_274340494.1 | hypothetical protein | - |
| JH270_RS10990 (JH270_11005) | 2590157..2590861 | + | 705 | WP_274340495.1 | hypothetical protein | - |
| JH270_RS10995 (JH270_11010) | 2590858..2591574 | + | 717 | WP_274340496.1 | hypothetical protein | - |
| JH270_RS11000 (JH270_11015) | 2591853..2592809 | + | 957 | WP_274340497.1 | hypothetical protein | - |
| JH270_RS11005 (JH270_11020) | 2592834..2593298 | + | 465 | WP_274340498.1 | hypothetical protein | - |
| JH270_RS11010 (JH270_11025) | 2593653..2595551 | - | 1899 | WP_274340499.1 | MobH family relaxase | - |
| JH270_RS11015 (JH270_11030) | 2595682..2596857 | - | 1176 | WP_274340500.1 | MFS transporter | - |
| JH270_RS11020 (JH270_11035) | 2596929..2597762 | - | 834 | WP_274340501.1 | hypothetical protein | - |
| JH270_RS11025 (JH270_11040) | 2597938..2598660 | - | 723 | WP_274340502.1 | HTH-type transcriptional regulator CdhR | VF |
| JH270_RS11030 (JH270_11045) | 2598908..2599897 | + | 990 | WP_274340503.1 | tripartite tricarboxylate transporter substrate-binding protein | - |
| JH270_RS11035 (JH270_11050) | 2599963..2600823 | + | 861 | WP_274340504.1 | PhzF family phenazine biosynthesis isomerase | - |
| JH270_RS11040 (JH270_11055) | 2600820..2601299 | + | 480 | WP_274342124.1 | RidA family protein | - |
| JH270_RS11045 (JH270_11060) | 2601311..2602564 | + | 1254 | WP_274340505.1 | lyase family protein | - |
| JH270_RS11050 (JH270_11065) | 2602591..2603346 | + | 756 | WP_274340506.1 | sulfite exporter TauE/SafE family protein | - |
| JH270_RS11055 (JH270_11070) | 2603577..2606576 | + | 3000 | WP_274340507.1 | DEAD/DEAH box helicase | - |
| JH270_RS11060 (JH270_11075) | 2606662..2608197 | + | 1536 | WP_274340508.1 | hypothetical protein | - |
| JH270_RS11065 (JH270_11080) | 2608604..2609227 | + | 624 | WP_228316184.1 | hypothetical protein | - |
| JH270_RS11070 (JH270_11085) | 2609527..2609760 | + | 234 | WP_274340509.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| JH270_RS11075 (JH270_11090) | 2609747..2610160 | + | 414 | WP_274340510.1 | PIN domain-containing protein | Toxin Detail |
| JH270_RS11080 (JH270_11095) | 2610184..2610552 | + | 369 | WP_274340511.1 | DUF3742 family protein | - |
| JH270_RS11085 (JH270_11100) | 2610557..2612074 | - | 1518 | WP_274340512.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| JH270_RS11090 (JH270_11105) | 2612462..2612860 | - | 399 | WP_274340513.1 | hypothetical protein | - |
| JH270_RS11095 (JH270_11110) | 2613050..2615188 | + | 2139 | WP_274340514.1 | AAA family ATPase | - |
| JH270_RS11100 (JH270_11115) | 2615188..2616999 | + | 1812 | WP_274340515.1 | ATP-dependent helicase | - |
| JH270_RS11115 (JH270_11130) | 2617897..2619309 | + | 1413 | WP_274342125.1 | oxygen-independent coproporphyrinogen III oxidase | - |
| JH270_RS11125 (JH270_11140) | 2619551..2620843 | + | 1293 | WP_274340516.1 | nucleotide sugar dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|