MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 41164 bp
Accession: NZ_CP066925 Location: 3600767..3641930 Organism: Xanthomonas campestris strain CFBP5824 Replicon: chromosome
Accession: NZ_CP066925 Location: 3600767..3641930 Organism: Xanthomonas campestris strain CFBP5824 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JH314_RS15975 (JH314_15925) | 3596407..3597801 | + | 1395 | WP_274339070.1 | sigma-54 dependent transcriptional regulator | - |
| JH314_RS15980 (JH314_15930) | 3597999..3598355 | + | 357 | WP_139328384.1 | hypothetical protein | - |
| JH314_RS15985 (JH314_15935) | 3598355..3599092 | + | 738 | WP_274339071.1 | zeta toxin family protein | - |
| JH314_RS15990 (JH314_15940) | 3599275..3601008 | - | 1734 | WP_274339072.1 | type IV-A pilus assembly ATPase PilB | - |
| JH314_RS15995 (JH314_15945) | 3601273..3601722 | - | 450 | WP_274339073.1 | hypothetical protein | VF |
| JH314_RS16000 (JH314_15950) | 3602204..3603361 | + | 1158 | WP_274340306.1 | hypothetical protein | VF |
| JH314_RS16005 (JH314_15955) | 3603368..3604231 | + | 864 | WP_040940797.1 | hypothetical protein | VF |
| JH314_RS16010 (JH314_15960) | 3604245..3604868 | + | 624 | WP_076038488.1 | dephospho-CoA kinase | - |
| JH314_RS16015 (JH314_15965) | 3605397..3605798 | + | 402 | WP_274339074.1 | SymE family type I addiction module toxin | - |
| JH314_RS16020 (JH314_15970) | 3605873..3606163 | + | 291 | WP_011038219.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| JH314_RS16025 (JH314_15975) | 3606160..3606651 | + | 492 | WP_223646366.1 | GNAT family N-acetyltransferase | Toxin Detail |
| JH314_RS16030 (JH314_15980) | 3606794..3608128 | - | 1335 | WP_274339075.1 | HAMP domain-containing sensor histidine kinase | - |
| JH314_RS16035 (JH314_15985) | 3608121..3608798 | - | 678 | WP_003490678.1 | Regulator of RpoS | VF |
| JH314_RS16040 (JH314_15990) | 3609448..3610323 | - | 876 | WP_070689999.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
| JH314_RS16045 (JH314_15995) | 3610817..3612946 | + | 2130 | WP_274339076.1 | glycogen debranching protein GlgX | - |
| JH314_RS16050 (JH314_16000) | 3613479..3613871 | - | 393 | WP_076038484.1 | H-NS family nucleoid-associated regulatory protein | - |
| JH314_RS16055 (JH314_16005) | 3613962..3614357 | - | 396 | WP_274339077.1 | hypothetical protein | - |
| JH314_RS16060 (JH314_16010) | 3614542..3614688 | - | 147 | WP_081340618.1 | hypothetical protein | - |
| JH314_RS16070 (JH314_16020) | 3617344..3617685 | + | 342 | WP_274339078.1 | hypothetical protein | - |
| JH314_RS16075 (JH314_16025) | 3617736..3619220 | - | 1485 | WP_274340307.1 | MobA/MobL family protein | - |
| JH314_RS16080 (JH314_16030) | 3619395..3620527 | + | 1133 | WP_274338866.1 | IS3 family transposase ISXca1 | Transposase |
| JH314_RS16085 (JH314_16035) | 3620798..3621778 | + | 981 | WP_064510573.1 | IS5 family transposase IS1646 | Transposase |
| JH314_RS16090 (JH314_16040) | 3621936..3622742 | + | 807 | WP_274339079.1 | caspase family protein | - |
| JH314_RS16095 (JH314_16045) | 3623247..3623897 | - | 651 | WP_274340308.1 | hypothetical protein | - |
| JH314_RS16100 (JH314_16050) | 3623938..3627972 | - | 4035 | WP_274339080.1 | hypothetical protein | - |
| JH314_RS16105 (JH314_16055) | 3628006..3628647 | - | 642 | WP_274339081.1 | DUF1629 domain-containing protein | - |
| JH314_RS16110 (JH314_16060) | 3628741..3629304 | - | 564 | WP_274340309.1 | DNA repair protein RadC | - |
| JH314_RS16115 (JH314_16065) | 3629575..3630036 | + | 462 | WP_274339082.1 | GNAT family N-acetyltransferase | - |
| JH314_RS16120 (JH314_16070) | 3630134..3631261 | + | 1128 | WP_274339083.1 | hypothetical protein | - |
| JH314_RS16125 (JH314_16075) | 3631391..3631804 | + | 414 | WP_274339084.1 | hypothetical protein | - |
| JH314_RS16130 (JH314_16080) | 3632283..3633239 | + | 957 | Protein_3116 | hypothetical protein ; Integrase | Integrase |
| JH314_RS16135 (JH314_16085) | 3633334..3634442 | + | 1109 | WP_274339085.1 | IS3 family transposase | - |
| JH314_RS16140 (JH314_16090) | 3634607..3635709 | - | 1103 | Protein_3118 | IS3 family transposase IS1404 | Transposase |
| JH314_RS16145 (JH314_16095) | 3635777..3637204 | + | 1428 | Protein_3119 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| JH314_RS16150 (JH314_16100) | 3637216..3637575 | - | 360 | WP_274339086.1 | DUF3742 family protein | - |
| JH314_RS16155 (JH314_16105) | 3637802..3638560 | + | 759 | WP_274339087.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| JH314_RS16160 (JH314_16110) | 3638553..3639479 | + | 927 | WP_274339088.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| JH314_RS16165 (JH314_16115) | 3639636..3639926 | - | 291 | WP_104552454.1 | hypothetical protein | - |
| JH314_RS16170 (JH314_16120) | 3640030..3640680 | - | 651 | WP_274339089.1 | GGDEF domain-containing protein | - |
| JH314_RS16175 (JH314_16125) | 3640749..3641851 | + | 1103 | WP_223645675.1 | IS3 family transposase IS1404 | Transposase |
| JH314_RS16180 (JH314_16130) | 3641911..3642603 | + | 693 | WP_274340310.1 | IS21-like element helper ATPase IstB | - |
| JH314_RS16185 (JH314_16135) | 3643409..3643410 | - | 2 | WP_274339090.1 | IS5 family transposase | - |
| JH314_RS16190 (JH314_16140) | 3643723..3643962 | - | 240 | WP_228423551.1 | hypothetical protein | - |
| JH314_RS16200 (JH314_16150) | 3644271..3644996 | - | 726 | WP_011036308.1 | AraC family transcriptional regulator | - |
| JH314_RS16205 (JH314_16155) | 3645113..3645622 | - | 510 | WP_274339091.1 | hypothetical protein | - |
| JH314_RS16210 (JH314_16160) | 3645877..3646281 | + | 405 | WP_172666257.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|