MGE detailed information
MGE type: IScluster/Tn MGE length: 25337 bp
Accession: NZ_CP066809 Location: 1767062..1792398 Organism: Shigella flexneri 3a strain 888048 Replicon: chromosome
Accession: NZ_CP066809 Location: 1767062..1792398 Organism: Shigella flexneri 3a strain 888048 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JGY96_RS08625 () | 1762372..1762917 | + | 546 | WP_000973202.1 | bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | - |
| JGY96_RS08630 () | 1762914..1763657 | + | 744 | WP_025759701.1 | adenosylcobinamide-GDP ribazoletransferase | - |
| JGY96_RS08635 () | 1763669..1764748 | + | 1080 | WP_001165578.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | - |
| JGY96_RS08640 () | 1764810..1765745 | + | 936 | WP_128861733.1 | L,D-transpeptidase | - |
| JGY96_RS08650 () | 1766203..1767087 | + | 885 | WP_119182152.1 | nitrogen assimilation transcriptional regulator NAC | - |
| JGY96_RS08655 () | 1767062..1768229 | - | 1168 | Protein_1694 | IS3 family transposase ISLad1 | Transposase |
| JGY96_RS08660 () | 1768473..1769423 | + | 951 | WP_001010995.1 | HTH-type transcriptional regulator Cbl | - |
| JGY96_RS08670 () | 1769541..1771168 | + | 1628 | Protein_1696 | toxic metabolite efflux MATE transporter YeeO | - |
| JGY96_RS08680 () | 1771800..1772516 | - | 717 | WP_000532920.1 | hypothetical protein | VF |
| JGY96_RS08685 () | 1772859..1773044 | - | 186 | Protein_1698 | AMP nucleosidase | - |
| JGY96_RS08690 () | 1773503..1773504 | - | 2 | WP_153933088.1 | IS1 family transposase IS1X1 | Transposase |
| JGY96_RS08695 () | 1773812..1775001 | - | 1190 | Protein_1700 | AMP nucleosidase | - |
| JGY96_RS08700 () | 1775014..1776240 | - | 1227 | Protein_1701 | IS3 family transposase IS2 | Transposase |
| JGY96_RS08705 () | 1776282..1776422 | - | 141 | WP_171769178.1 | hypothetical protein | - |
| JGY96_RS08710 () | 1776524..1777234 | - | 711 | Protein_1703 | MFS transporter | - |
| JGY96_RS08715 () | 1777259..1778456 | + | 1198 | Protein_1704 | IS3 family transposase ISLad1 | Transposase |
| JGY96_RS08720 () | 1778563..1779825 | - | 1263 | WP_025759341.1 | hypothetical protein ; Integrase | Integrase |
| JGY96_RS08730 () | 1780163..1780960 | - | 798 | WP_001325918.1 | DgsA anti-repressor MtfA | - |
| JGY96_RS08740 () | 1781171..1782208 | - | 1038 | WP_004974968.1 | hypothetical protein ; Integrase | Integrase |
| JGY96_RS08745 () | 1782208..1782411 | - | 204 | WP_025759339.1 | DUF4224 domain-containing protein | - |
| JGY96_RS08750 () | 1782470..1782774 | - | 305 | Protein_1709 | 3'-5' exoribonuclease | - |
| JGY96_RS08755 () | 1783256..1783257 | - | 2 | WP_153933088.1 | IS1 family transposase IS1X4 | Transposase |
| JGY96_RS08760 () | 1783580..1783996 | + | 417 | WP_005069274.1 | hypothetical protein | - |
| - | 1784578..1784636 | - | 59 | - | - | Antitoxin Detail |
| JGY96_RS08765 () | 1784648..1784803 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| JGY96_RS08770 () | 1784971..1785249 | + | 279 | WP_000929754.1 | hypothetical protein | - |
| JGY96_RS08775 () | 1785251..1786309 | + | 1059 | WP_025759819.1 | DUF968 domain-containing protein | - |
| JGY96_RS08780 () | 1786310..1786675 | + | 366 | WP_000140020.1 | RusA family crossover junction endodeoxyribonuclease | - |
| JGY96_RS08785 () | 1786672..1787387 | + | 716 | Protein_1716 | bacteriophage antitermination protein Q | - |
| JGY96_RS08810 () | 1788183..1788398 | + | 216 | WP_000839572.1 | class II holin family protein | - |
| JGY96_RS08815 () | 1788497..1789171 | + | 675 | WP_001088287.1 | IS66 family transposase ISSfl3 | Transposase |
| JGY96_RS08820 () | 1789168..1789515 | + | 348 | WP_000631711.1 | IS66 family transposase ISSfl3 | Transposase |
| JGY96_RS08825 () | 1789535..1790344 | + | 810 | Protein_1720 | IS66 family transposase ISSfl3 | Transposase |
| JGY96_RS08830 () | 1790410..1791564 | + | 1155 | WP_254100647.1 | IS3 family transposase ISSd1 | Transposase |
| JGY96_RS08835 () | 1791607..1792398 | + | 792 | Protein_1722 | IS66 family transposase ISSfl3 | Transposase |
| JGY96_RS08840 () | 1792398..1792919 | + | 522 | Protein_1723 | lysozyme RrrD | - |
| JGY96_RS08845 () | 1792916..1793380 | + | 465 | WP_000092290.1 | lysis protein | - |
| JGY96_RS08850 () | 1793423..1793773 | + | 351 | WP_001139556.1 | HNH endonuclease signature motif containing protein | - |
| JGY96_RS08855 () | 1793921..1794403 | + | 483 | WP_024166447.1 | phage terminase small subunit P27 family | - |
| JGY96_RS08860 () | 1794403..1796160 | + | 1758 | WP_040235539.1 | terminase large subunit | - |
| JGY96_RS08865 () | 1796172..1796354 | + | 183 | WP_000478600.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|