MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 73616 bp
Accession: NZ_CP066806 Location: 872647..946262 Organism: Escherichia coli strain TCM3e1 Replicon: chromosome
Accession: NZ_CP066806 Location: 872647..946262 Organism: Escherichia coli strain TCM3e1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JGU77_RS04165 () | 869247..870395 | - | 1149 | WP_000905920.1 | capsule polysaccharide export inner-membrane protein KpsE | - |
| JGU77_RS04170 () | 870467..871450 | - | 984 | WP_001298261.1 | KpsF/GutQ family sugar-phosphate isomerase | - |
| JGU77_RS04175 () | 872261..872431 | - | 171 | Protein_821 | IS110 family transposase | - |
| JGU77_RS04180 () | 872774..873616 | - | 843 | Protein_822 | DUF4942 domain-containing protein | - |
| JGU77_RS04185 () | 873701..873895 | - | 195 | WP_024181941.1 | DUF957 domain-containing protein | - |
| JGU77_RS04190 () | 873974..874123 | - | 150 | Protein_824 | hypothetical protein | - |
| JGU77_RS04195 () | 874120..874497 | - | 378 | WP_001564063.1 | TA system toxin CbtA family protein | Toxin Detail |
| JGU77_RS04200 () | 874587..874955 | - | 369 | WP_021553056.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JGU77_RS04205 () | 875118..875339 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| JGU77_RS04210 () | 875404..875880 | - | 477 | WP_021553055.1 | RadC family protein | - |
| JGU77_RS04215 () | 875896..876375 | - | 480 | WP_001564060.1 | antirestriction protein | - |
| JGU77_RS04220 () | 876641..877459 | - | 819 | WP_001564059.1 | DUF945 domain-containing protein | - |
| JGU77_RS04225 () | 877549..877782 | - | 234 | WP_001278293.1 | DUF905 family protein | - |
| JGU77_RS04230 () | 877788..878465 | - | 678 | WP_001564058.1 | hypothetical protein | - |
| JGU77_RS04235 () | 878616..879296 | - | 681 | WP_001278649.1 | WYL domain-containing protein | - |
| JGU77_RS04240 () | 879499..880383 | - | 885 | WP_001564055.1 | 50S ribosome-binding GTPase | - |
| JGU77_RS04245 () | 880484..881707 | + | 1224 | WP_085334590.1 | hypothetical protein | - |
| JGU77_RS04250 () | 882870..883400 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| JGU77_RS04255 () | 884070..884801 | + | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| JGU77_RS04260 () | 885322..885774 | + | 453 | WP_000558152.1 | N-acetyltransferase | - |
| JGU77_RS04265 () | 886310..887245 | + | 936 | WP_000332862.1 | pseudouridine kinase | - |
| JGU77_RS04270 () | 887238..888173 | + | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| JGU77_RS04275 () | 888257..889507 | + | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| JGU77_RS04280 () | 889526..890620 | - | 1095 | WP_000370278.1 | sugar kinase | - |
| JGU77_RS04285 () | 891921..892487 | + | 567 | WP_001126810.1 | inovirus-type Gp2 protein | - |
| JGU77_RS04290 () | 892745..893320 | + | 576 | WP_001564054.1 | hypothetical protein | - |
| JGU77_RS04295 () | 893389..893622 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| JGU77_RS04300 () | 893634..893859 | + | 226 | Protein_846 | hypothetical protein | - |
| JGU77_RS04305 () | 893921..894187 | - | 267 | Protein_847 | IS3 family transposase IS2 | Transposase |
| JGU77_RS04310 () | 894278..895435 | + | 1158 | Protein_848 | Multidrug resistance protein MexB | VF |
| JGU77_RS04315 () | 895556..896206 | + | 651 | WP_001564048.1 | TetR/AcrR family transcriptional regulator | - |
| JGU77_RS04320 () | 896229..896522 | + | 294 | Protein_850 | helix-turn-helix domain-containing protein | - |
| JGU77_RS04325 () | 896879..897424 | - | 546 | WP_001564047.1 | propanediol utilization system shell hexameric protein GrpS | - |
| JGU77_RS04330 () | 897469..898620 | - | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| JGU77_RS04335 () | 898749..899804 | - | 1056 | WP_001564046.1 | HTH-type transcriptional activator Btr | VF |
| JGU77_RS04340 () | 899821..901050 | - | 1230 | WP_000792585.1 | propanediol utilization sensor histidine kinase GrpP | - |
| JGU77_RS04345 () | 901699..902292 | - | 594 | Protein_855 | maturase | - |
| JGU77_RS04350 () | 902292..902661 | - | 370 | Protein_856 | reverse transcriptase/maturase | - |
| JGU77_RS04355 () | 903273..904178 | - | 906 | WP_001564044.1 | propanediol utilization system permease GrpO | - |
| JGU77_RS04360 () | 904315..905232 | - | 918 | WP_001564043.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| JGU77_RS04365 () | 905341..907893 | - | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| JGU77_RS04370 () | 907942..908517 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| JGU77_RS04375 () | 908528..908827 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| JGU77_RS04380 () | 908851..910368 | - | 1518 | WP_000997839.1 | Aldehyde-alcohol dehydrogenase | VF |
| JGU77_RS04385 () | 910429..911214 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| JGU77_RS04390 () | 911236..911517 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| JGU77_RS04395 () | 911802..912998 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| JGU77_RS04400 () | 913027..913524 | - | 498 | WP_001564042.1 | propanediol utilization system heme-binding protein GrpF | - |
| JGU77_RS04405 () | 913552..913821 | - | 270 | WP_001564041.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| JGU77_RS04410 () | 913833..914537 | - | 705 | WP_000370214.1 | propanediol utilization system flavoprotein GrpD | - |
| JGU77_RS04415 () | 914542..915300 | - | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| JGU77_RS04420 () | 915355..916041 | - | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| JGU77_RS04425 () | 916181..917299 | - | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| JGU77_RS04430 () | 917656..918156 | + | 501 | Protein_872 | DNA-binding protein | - |
| JGU77_RS04435 () | 918252..918485 | + | 234 | WP_000124185.1 | hypothetical protein | - |
| JGU77_RS04440 () | 918538..918729 | - | 192 | WP_001287883.1 | DUF4222 domain-containing protein | - |
| JGU77_RS04445 () | 919450..919710 | + | 261 | Protein_875 | IS3 family transposase ISLad1 | Transposase |
| JGU77_RS04450 () | 919853..921598 | + | 1746 | WP_001564039.1 | AAA family ATPase | - |
| JGU77_RS04455 () | 921992..922432 | + | 441 | WP_001403216.1 | hypothetical protein | VF |
| JGU77_RS04460 () | 922473..923339 | + | 867 | Protein_878 | ImpA domain protein | - |
| JGU77_RS04465 () | 923456..924100 | + | 645 | WP_024196335.1 | hypothetical protein | - |
| JGU77_RS04470 () | 924241..925473 | + | 1233 | WP_001564037.1 | phosphoadenosine phosphosulfate reductase | - |
| JGU77_RS04475 () | 925458..926096 | + | 639 | WP_001564035.1 | ParB N-terminal domain-containing protein | - |
| JGU77_RS04480 () | 926175..926444 | + | 270 | WP_000226517.1 | PerC family transcriptional regulator | - |
| JGU77_RS04485 () | 926465..927109 | + | 645 | WP_001564034.1 | hypothetical protein | - |
| JGU77_RS04490 () | 927174..927497 | + | 324 | WP_001564033.1 | hypothetical protein | - |
| JGU77_RS04495 () | 927545..928336 | - | 792 | Protein_885 | ATP-dependent helicase | - |
| JGU77_RS04500 () | 928331..928720 | + | 390 | Protein_886 | IS3 family transposase | - |
| JGU77_RS04505 () | 929393..930901 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| JGU77_RS04510 () | 930991..931464 | + | 474 | Protein_888 | IS3 family transposase IS629 | Transposase |
| JGU77_RS04515 () | 931662..931919 | - | 258 | Protein_889 | IS3 family transposase IS911 | Transposase |
| JGU77_RS04520 () | 931989..932336 | - | 348 | WP_001564031.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| JGU77_RS04525 () | 932955..933648 | - | 694 | Protein_891 | IS1 family transposase | - |
| JGU77_RS04530 () | 933901..935370 | + | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| JGU77_RS04535 () | 935475..937844 | + | 2370 | WP_000671170.1 | arginine decarboxylase | - |
| JGU77_RS04540 () | 937919..939418 | + | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| JGU77_RS04545 () | 939561..940258 | + | 698 | Protein_895 | IS1 family transposase IS1S | Transposase |
| JGU77_RS04550 () | 940725..941276 | - | 552 | WP_001447126.1 | Transcriptional repressor MprA | VF |
| JGU77_RS04555 () | 941443..942234 | - | 792 | Protein_897 | IS3 family transposase | - |
| JGU77_RS04560 () | 942251..942948 | - | 698 | Protein_898 | IS1 family transposase IS1A | Transposase |
| JGU77_RS04565 () | 943478..944521 | - | 1044 | WP_000147018.1 | hypothetical protein | - |
| JGU77_RS04570 () | 944777..946042 | - | 1266 | WP_001218869.1 | Prophage integrase IntS ; Integrase | Integrase |
| JGU77_RS04580 () | 946421..947128 | - | 708 | WP_000234532.1 | DUF554 domain-containing protein | - |
| JGU77_RS04585 () | 947520..949655 | + | 2136 | WP_075862140.1 | ornithine decarboxylase | - |
| JGU77_RS04590 () | 949704..950960 | - | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|