MGE detailed information
MGE type: Genomic_island MGE length: 65672 bp
Accession: NZ_CP066806 Location: 4247820..4313491 Organism: Escherichia coli strain TCM3e1 Replicon: chromosome
Accession: NZ_CP066806 Location: 4247820..4313491 Organism: Escherichia coli strain TCM3e1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JGU77_RS20255 () | 4244351..4245076 | - | 726 | WP_075862187.1 | type 1 fimbria chaperone FimC | - |
| JGU77_RS20260 () | 4245113..4245652 | - | 540 | WP_050487714.1 | type 1 fimbrial protein | - |
| JGU77_RS20265 () | 4245717..4246265 | - | 549 | WP_032172266.1 | type 1 fimbrial major subunit FimA | - |
| JGU77_RS20270 () | 4246746..4247342 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| JGU77_RS20275 () | 4247820..4248422 | - | 603 | WP_000790588.1 | Tyrosine recombinase XerC | VF |
| JGU77_RS20280 () | 4249888..4250604 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| JGU77_RS20285 () | 4250624..4251730 | + | 1107 | WP_063120219.1 | N-acetylneuraminate epimerase | - |
| JGU77_RS20290 () | 4251795..4252781 | + | 987 | WP_075862193.1 | sialate O-acetylesterase | - |
| JGU77_RS20295 () | 4253643..4255376 | + | 1734 | WP_075862184.1 | ATP-binding protein | - |
| JGU77_RS20300 () | 4255373..4257280 | + | 1908 | WP_075862183.1 | N-6 DNA methylase | - |
| JGU77_RS20305 () | 4257361..4260423 | - | 3063 | WP_049037001.1 | HsdR family type I site-specific deoxyribonuclease | - |
| JGU77_RS20310 () | 4260425..4261612 | - | 1188 | WP_048967594.1 | restriction endonuclease subunit S | - |
| JGU77_RS20315 () | 4261605..4263101 | - | 1497 | WP_001376160.1 | type I restriction-modification system subunit M | - |
| JGU77_RS20320 () | 4263107..4264606 | - | 1500 | WP_000172638.1 | type I restriction-modification system subunit M | - |
| JGU77_RS20325 () | 4264904..4265887 | + | 984 | WP_024179470.1 | toll/interleukin-1 receptor domain-containing protein | - |
| JGU77_RS20330 () | 4266072..4267061 | - | 990 | WP_086176906.1 | restriction endonuclease | - |
| JGU77_RS20335 () | 4267190..4270705 | - | 3516 | WP_049037003.1 | ATP-binding protein | - |
| JGU77_RS20340 () | 4271031..4271408 | - | 378 | WP_000784767.1 | hypothetical protein | - |
| JGU77_RS20345 () | 4271477..4272256 | - | 780 | WP_001088803.1 | HNH endonuclease | - |
| JGU77_RS20350 () | 4272862..4273008 | - | 147 | WP_001290178.1 | hypothetical protein | - |
| JGU77_RS20355 () | 4273093..4273290 | - | 198 | WP_001327226.1 | DUF957 domain-containing protein | - |
| JGU77_RS20360 () | 4273310..4273798 | - | 489 | WP_000761685.1 | hypothetical protein | - |
| JGU77_RS20365 () | 4273795..4274172 | - | 378 | WP_001094444.1 | TA system toxin CbtA family protein | Toxin Detail |
| JGU77_RS20370 () | 4274262..4274630 | - | 369 | WP_001285607.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JGU77_RS20375 () | 4274710..4274931 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| JGU77_RS20380 () | 4275018..4275494 | - | 477 | WP_001384029.1 | RadC family protein | - |
| JGU77_RS20385 () | 4275509..4275994 | - | 486 | WP_200403398.1 | antirestriction protein | - |
| JGU77_RS20390 () | 4276086..4276904 | - | 819 | WP_001175175.1 | DUF945 domain-containing protein | - |
| JGU77_RS20395 () | 4276994..4277203 | - | 210 | WP_032150870.1 | DUF905 family protein | - |
| JGU77_RS20400 () | 4277233..4277910 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| JGU77_RS20405 () | 4278058..4278738 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| JGU77_RS20410 () | 4278941..4279825 | - | 885 | WP_000010408.1 | 50S ribosome-binding GTPase | - |
| JGU77_RS20415 () | 4280010..4281140 | + | 1131 | WP_047928958.1 | hypothetical protein | - |
| JGU77_RS20420 () | 4282619..4283350 | + | 732 | WP_001075464.1 | inovirus Gp2 family protein | - |
| JGU77_RS20425 () | 4283678..4284556 | + | 879 | WP_000769116.1 | restriction endonuclease | - |
| JGU77_RS20430 () | 4284610..4285184 | + | 575 | Protein_4000 | transposase | - |
| JGU77_RS20435 () | 4285317..4286092 | - | 776 | Protein_4001 | DDE-type integrase/transposase/recombinase | - |
| JGU77_RS20440 () | 4286313..4286753 | + | 441 | WP_000038139.1 | H-NS histone family protein | - |
| JGU77_RS20445 () | 4287021..4287149 | + | 129 | Protein_4003 | IS256 family transposase | - |
| JGU77_RS20450 () | 4287179..4287528 | - | 350 | Protein_4004 | transposase | - |
| JGU77_RS20455 () | 4288692..4289258 | + | 567 | WP_001126809.1 | inovirus-type Gp2 protein | - |
| JGU77_RS20460 () | 4289505..4290080 | + | 576 | WP_000991596.1 | hypothetical protein | - |
| JGU77_RS20465 () | 4290149..4290382 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| JGU77_RS20470 () | 4290639..4291151 | + | 513 | WP_001167442.1 | hypothetical protein | - |
| JGU77_RS20475 () | 4291747..4292349 | + | 603 | WP_001204062.1 | hypothetical protein | - |
| JGU77_RS20480 () | 4292359..4293342 | + | 984 | WP_000074845.1 | DUF4868 domain-containing protein | - |
| JGU77_RS20485 () | 4293429..4293919 | + | 491 | Protein_4011 | transposase | - |
| JGU77_RS20490 () | 4293979..4295191 | + | 1213 | Protein_4012 | IS3 family transposase IS1203 | Transposase |
| JGU77_RS20495 () | 4295374..4295997 | + | 624 | WP_001470157.1 | hypothetical protein | - |
| JGU77_RS20500 () | 4296132..4297722 | - | 1591 | Protein_4014 | IS3 family transposase | - |
| JGU77_RS20505 () | 4297831..4298031 | + | 201 | WP_012311738.1 | hypothetical protein | - |
| JGU77_RS20510 () | 4298121..4298507 | + | 387 | WP_001342709.1 | hypothetical protein | - |
| JGU77_RS20515 () | 4298565..4299599 | - | 1035 | WP_000774671.1 | virulence RhuM family protein | - |
| JGU77_RS20520 () | 4299635..4300474 | - | 840 | WP_200403427.1 | ATP F0F1 synthase synthase | - |
| JGU77_RS20525 () | 4300477..4301031 | - | 555 | WP_001090220.1 | hypothetical protein | - |
| JGU77_RS20530 () | 4301031..4304267 | - | 3237 | WP_000718842.1 | type I restriction endonuclease subunit R | - |
| JGU77_RS20535 () | 4304267..4305553 | - | 1287 | WP_000991122.1 | restriction endonuclease subunit S | - |
| JGU77_RS20540 () | 4305553..4307532 | - | 1980 | WP_001053122.1 | type I restriction-modification system subunit M | - |
| JGU77_RS20545 () | 4307599..4308096 | - | 498 | WP_000648433.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| JGU77_RS20550 () | 4308369..4309066 | + | 698 | Protein_4024 | IS1 family transposase | - |
| JGU77_RS20555 () | 4309083..4309259 | - | 177 | Protein_4025 | integrase | - |
| JGU77_RS20560 () | 4309489..4310229 | + | 741 | WP_001477155.1 | porin family protein | - |
| JGU77_RS20565 () | 4310403..4311902 | + | 1500 | WP_012311728.1 | phosphoethanolamine transferase | - |
| JGU77_RS20570 () | 4312226..4313491 | - | 1266 | WP_001218930.1 | Prophage integrase IntA ; Integrase | Integrase |
| JGU77_RS20580 () | 4313958..4314977 | + | 1020 | WP_075861640.1 | NADPH-dependent aldehyde reductase Ahr | - |
| JGU77_RS20585 () | 4314981..4315544 | - | 564 | WP_000896738.1 | gluconokinase | - |
| JGU77_RS20590 () | 4315761..4316792 | + | 1032 | WP_001197409.1 | L-idonate 5-dehydrogenase | - |
| JGU77_RS20595 () | 4316816..4317580 | + | 765 | WP_000998703.1 | gluconate 5-dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|