MGE detailed information
MGE type: Prophage MGE length: 43288 bp
Accession: NZ_CP066721 Location: 1952776..1996063 Organism: Staphylococcus xylosus strain 2.1523 Replicon: chromosome
Accession: NZ_CP066721 Location: 1952776..1996063 Organism: Staphylococcus xylosus strain 2.1523 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JGY88_RS09300 (1948234) | 1948234..1949172 | + | 939 | WP_101103731.1 | 1,4-dihydroxy-2-naphthoate polyprenyltransferase | - |
| JGY88_RS09305 (1949247) | 1949247..1949816 | - | 570 | WP_101103733.1 | GNAT family N-acetyltransferase | - |
| JGY88_RS09310 (1949997) | 1949997..1950209 | + | 213 | WP_029379120.1 | NINE protein | - |
| JGY88_RS09315 (1950816) | 1950816..1951307 | - | 492 | WP_101103735.1 | hypothetical protein | - |
| JGY88_RS09320 (1952539) | 1952539..1952739 | + | 201 | WP_124227076.1 | hypothetical protein | - |
| JGY88_RS09325 (1952776) | 1952776..1952958 | - | 183 | WP_225486467.1 | hypothetical protein | - |
| JGY88_RS09330 (1953298) | 1953298..1953714 | - | 417 | WP_225486468.1 | YolD-like family protein | - |
| JGY88_RS09335 (1953801) | 1953801..1954553 | - | 753 | WP_124227073.1 | adenylate/guanylate cyclase domain-containing protein | - |
| JGY88_RS09340 (1954569) | 1954569..1955069 | - | 501 | WP_225486469.1 | DUF5706 domain-containing protein | - |
| JGY88_RS09345 (1955157) | 1955157..1955324 | - | 168 | WP_255882924.1 | SH3 domain-containing protein | - |
| JGY88_RS09350 (1955599) | 1955599..1956312 | + | 714 | WP_225486471.1 | hypothetical protein | - |
| JGY88_RS09355 (1956760) | 1956760..1959060 | - | 2301 | WP_225486472.1 | Teichoic acid poly(glycerol phosphate) polymerase | VF |
| JGY88_RS09360 (1959424) | 1959424..1960818 | - | 1395 | WP_225486473.1 | N-acetylmuramoyl-L-alanine amidase | - |
| JGY88_RS09365 (1960858) | 1960858..1961313 | - | 456 | WP_225486474.1 | phage holin family protein | - |
| JGY88_RS09370 (1961349) | 1961349..1961504 | - | 156 | WP_107556223.1 | XkdX family protein | - |
| JGY88_RS09375 (1961491) | 1961491..1961844 | - | 354 | WP_225486475.1 | hypothetical protein | - |
| JGY88_RS09380 (1961855) | 1961855..1963240 | - | 1386 | WP_225486476.1 | BppU family phage baseplate upper protein | - |
| JGY88_RS09385 (1963253) | 1963253..1965271 | - | 2019 | WP_225486477.1 | hypothetical protein | - |
| JGY88_RS09390 (1965272) | 1965272..1965754 | - | 483 | WP_225486478.1 | hypothetical protein | - |
| JGY88_RS09395 (1965747) | 1965747..1967336 | - | 1590 | WP_225486479.1 | prophage endopeptidase tail family protein | - |
| JGY88_RS09400 (1967346) | 1967346..1968173 | - | 828 | WP_225486480.1 | phage tail family protein | - |
| JGY88_RS09405 (1968175) | 1968175..1973247 | - | 5073 | WP_225486481.1 | phage tail tape measure protein | - |
| JGY88_RS09410 (1973264) | 1973264..1973407 | - | 144 | WP_199186119.1 | hypothetical protein | - |
| JGY88_RS09415 (1973467) | 1973467..1973835 | - | 369 | WP_225486482.1 | hypothetical protein | - |
| JGY88_RS09420 (1973901) | 1973901..1974080 | - | 180 | WP_107540692.1 | hypothetical protein | - |
| JGY88_RS09425 (1974100) | 1974100..1974738 | - | 639 | WP_225486483.1 | phage tail protein | - |
| JGY88_RS09430 (1974750) | 1974750..1975145 | - | 396 | WP_225486484.1 | hypothetical protein | - |
| JGY88_RS09435 (1975166) | 1975166..1975555 | - | 390 | WP_225486485.1 | hypothetical protein | - |
| JGY88_RS09440 (1975545) | 1975545..1975913 | - | 369 | WP_225486486.1 | hypothetical protein | - |
| JGY88_RS09445 (1975897) | 1975897..1976184 | - | 288 | WP_107599669.1 | hypothetical protein | - |
| JGY88_RS09450 (1976202) | 1976202..1977413 | - | 1212 | WP_225486487.1 | phage major capsid protein | - |
| JGY88_RS09455 (1977425) | 1977425..1978126 | - | 702 | WP_225486488.1 | Clp protease ClpP | - |
| JGY88_RS09460 (1978101) | 1978101..1979267 | - | 1167 | WP_225486489.1 | phage portal protein | - |
| JGY88_RS09465 (1979283) | 1979283..1980953 | - | 1671 | WP_225486490.1 | terminase large subunit | - |
| JGY88_RS09470 (1980950) | 1980950..1981312 | - | 363 | WP_225486492.1 | hypothetical protein | - |
| JGY88_RS09475 (1981490) | 1981490..1981804 | - | 315 | WP_225486494.1 | HNH endonuclease | - |
| JGY88_RS09480 (1982091) | 1982091..1982489 | - | 399 | WP_107540680.1 | hypothetical protein | - |
| JGY88_RS09490 (1982649) | 1982649..1982945 | - | 297 | WP_225486495.1 | DUF5052 family protein | - |
| JGY88_RS09495 (1982949) | 1982949..1983107 | - | 159 | WP_225486497.1 | hypothetical protein | - |
| JGY88_RS09500 (1983111) | 1983111..1983341 | - | 231 | WP_225486498.1 | hypothetical protein | - |
| JGY88_RS09505 (1983680) | 1983680..1983940 | + | 261 | WP_225486499.1 | YrhK family protein | - |
| JGY88_RS09510 (1983985) | 1983985..1984284 | - | 300 | WP_107606929.1 | MazG-like family protein | - |
| JGY88_RS09515 (1984344) | 1984344..1984658 | + | 315 | WP_225486500.1 | hypothetical protein | - |
| JGY88_RS09520 (1984642) | 1984642..1984908 | - | 267 | WP_065865344.1 | DUF2829 domain-containing protein | - |
| JGY88_RS09525 (1984909) | 1984909..1985229 | - | 321 | WP_225486501.1 | hypothetical protein | - |
| JGY88_RS09530 (1985361) | 1985361..1985621 | - | 261 | WP_225486502.1 | YopX family protein | - |
| JGY88_RS09535 (1985703) | 1985703..1985846 | - | 144 | WP_225486503.1 | hypothetical protein | - |
| JGY88_RS09540 (1986192) | 1986192..1986593 | - | 402 | WP_225486504.1 | hypothetical protein | - |
| JGY88_RS09545 (1986607) | 1986607..1986813 | - | 207 | WP_225486506.1 | hypothetical protein | - |
| JGY88_RS09550 (1986819) | 1986819..1987220 | - | 402 | WP_225486507.1 | DUF1064 domain-containing protein | - |
| JGY88_RS09555 (1987232) | 1987232..1987444 | - | 213 | WP_225486508.1 | hypothetical protein | - |
| JGY88_RS09560 (1987445) | 1987445..1987615 | - | 171 | WP_225486509.1 | hypothetical protein | - |
| JGY88_RS09565 (1987616) | 1987616..1988398 | - | 783 | WP_225486510.1 | ATP-binding protein | - |
| JGY88_RS09570 (1988411) | 1988411..1989166 | - | 756 | WP_225486511.1 | DnaD domain protein | - |
| JGY88_RS09575 (1989153) | 1989153..1989830 | - | 678 | WP_225486512.1 | putative HNHc nuclease | - |
| JGY88_RS09580 (1989842) | 1989842..1990291 | - | 450 | WP_225486513.1 | single-stranded DNA-binding protein | - |
| JGY88_RS09585 (1990291) | 1990291..1990911 | - | 621 | WP_225486515.1 | DUF1071 domain-containing protein | - |
| JGY88_RS09590 (1990904) | 1990904..1991164 | - | 261 | WP_225486516.1 | hypothetical protein | - |
| JGY88_RS09595 (1991228) | 1991228..1991407 | - | 180 | WP_225486517.1 | hypothetical protein | - |
| JGY88_RS09600 (1991420) | 1991420..1991704 | - | 285 | WP_225486518.1 | DUF771 domain-containing protein | - |
| JGY88_RS09605 (1991716) | 1991716..1992456 | - | 741 | WP_225486519.1 | phage antirepressor KilAC domain-containing protein | - |
| JGY88_RS09610 (1992611) | 1992611..1992841 | - | 231 | WP_225486520.1 | helix-turn-helix transcriptional regulator | - |
| JGY88_RS09615 (1993007) | 1993007..1993339 | + | 333 | WP_225486521.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| JGY88_RS09620 (1993351) | 1993351..1993815 | + | 465 | WP_225486523.1 | ImmA/IrrE family metallo-endopeptidase | Toxin Detail |
| JGY88_RS09625 (1993902) | 1993902..1994453 | + | 552 | WP_225486524.1 | Ltp family lipoprotein | - |
| JGY88_RS09630 (1994517) | 1994517..1994975 | + | 459 | WP_225486525.1 | hypothetical protein | - |
| JGY88_RS09635 (1995032) | 1995032..1996063 | + | 1032 | WP_225486526.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| JGY88_RS09650 (1996555) | 1996555..1997118 | - | 564 | WP_017722273.1 | competence protein ComK | - |
| JGY88_RS09655 (1997371) | 1997371..1997589 | + | 219 | WP_029379123.1 | IDEAL domain-containing protein | - |
| JGY88_RS09660 (1997689) | 1997689..1998675 | - | 987 | WP_047172628.1 | lipoate--protein ligase | - |
| JGY88_RS09665 (1998875) | 1998875..1999060 | + | 186 | WP_002483735.1 | DUF2187 family protein | - |
| JGY88_RS09670 (1999066) | 1999066..1999668 | + | 603 | WP_101103737.1 | CPBP family glutamic-type intramembrane protease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|