MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 161302 bp
Accession: NZ_CP066565        Location: 1331689..1492990         Organism: Histophilus somni strain ASc-MMNZ-VFA-076       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JFL57_RS05800 () 1330177..1331250 + 1074 WP_198987071.1 YadA-like family protein -
JFL57_RS05805 () 1331372..1332796 - 1425 WP_011609310.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -
JFL57_RS05810 () 1332949..1334115 + 1167 WP_075294515.1 FAD-dependent monooxygenase -
JFL57_RS05815 () 1334274..1335392 + 1119 WP_011609312.1 Spermidine/putrescine import ATP-binding protein PotA VF
JFL57_RS05820 () 1335376..1336236 + 861 WP_011609313.1 spermidine/putrescine ABC transporter permease PotB -
JFL57_RS05825 () 1336236..1337003 + 768 WP_075294514.1 spermidine/putrescine ABC transporter permease PotC -
JFL57_RS05830 () 1337167..1338252 + 1086 WP_198986838.1 extracellular solute-binding protein -
JFL57_RS05835 () 1338308..1341742 - 3435 WP_075294512.1 transcription-repair coupling factor -
JFL57_RS05840 () 1341745..1342461 - 717 WP_012340716.1 bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase -
JFL57_RS05845 () 1342601..1345246 + 2646 WP_075294511.1 DNA topoisomerase (ATP-hydrolyzing) subunit A -
JFL57_RS05850 () 1345608..1345934 + 327 WP_075294510.1 alkylphosphonate utilization protein -
JFL57_RS05855 () 1345971..1347188 + 1218 WP_012340720.1 aromatic amino acid transporter -
JFL57_RS05860 () 1347299..1348573 - 1275 WP_075294509.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
JFL57_RS05865 () 1348593..1348844 - 252 WP_075294508.1 BolA family transcriptional regulator -
JFL57_RS05870 () 1348857..1349189 - 333 WP_075294507.1 STAS domain-containing protein -
JFL57_RS05875 () 1349193..1349822 - 630 WP_012340723.1 phospholipid-binding protein MlaC -
JFL57_RS05880 () 1349858..1350364 - 507 WP_075294506.1 outer membrane lipid asymmetry maintenance protein MlaD -
JFL57_RS05885 () 1350396..1351181 - 786 WP_198986839.1 lipid asymmetry maintenance ABC transporter permease subunit MlaE -
JFL57_RS05890 () 1351178..1351972 - 795 WP_011609328.1 putative phospholipid import ATP-binding protein MlaF VF
JFL57_RS05895 () 1352204..1352779 + 576 WP_075294504.1 LPS export ABC transporter periplasmic protein LptC -
JFL57_RS05900 () 1352760..1353278 + 519 WP_011609330.1 lipopolysaccharide transport periplasmic protein LptA -
JFL57_RS05905 () 1353293..1354018 + 726 WP_012340728.1 Lipopolysaccharide export system ATP-binding protein LptB VF
JFL57_RS05910 () 1354021..1354545 + 525 WP_075294503.1 PTS sugar transporter subunit IIA -
JFL57_RS05915 () 1354584..1355444 + 861 WP_198986840.1 RNase adapter RapZ -
JFL57_RS05920 () 1355480..1357531 - 2052 WP_198986841.1 methionine--tRNA ligase -
JFL57_RS05925 () 1357672..1358793 + 1122 WP_012340731.1 iron-sulfur cluster carrier protein ApbC -
JFL57_RS05930 () 1358777..1359013 - 237 WP_080514392.1 recombinase family protein -
JFL57_RS05935 () 1359234..1359539 - 306 WP_012340732.1 type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family Toxin Detail
JFL57_RS05940 () 1359543..1359833 - 291 WP_075294500.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin Detail
JFL57_RS05945 () 1360005..1360568 - 564 WP_178384292.1 molecular chaperone -
JFL57_RS05950 () 1360565..1361185 - 621 WP_011608731.1 NAD(P)H-dependent oxidoreductase -
JFL57_RS05955 () 1361195..1361638 - 444 WP_012340735.1 NfeD family protein -
JFL57_RS05960 () 1361685..1362605 - 921 WP_198986842.1 SPFH/Band 7/PHB domain protein -
JFL57_RS05965 () 1362888..1363340 + 453 WP_011608728.1 type II 3-dehydroquinate dehydratase -
JFL57_RS05970 () 1363529..1363990 + 462 WP_012340736.1 acetyl-CoA carboxylase biotin carboxyl carrier protein -
JFL57_RS05975 () 1364051..1365397 + 1347 WP_012340737.1 acetyl-CoA carboxylase biotin carboxylase subunit -
JFL57_RS05980 () 1365469..1365705 + 237 WP_041605123.1 DUF997 family protein -
JFL57_RS05985 () 1365702..1367144 + 1443 WP_075294499.1 sodium/pantothenate symporter -
JFL57_RS05990 () 1367145..1368035 + 891 WP_198986843.1 50S ribosomal protein L11 methyltransferase -
JFL57_RS05995 () 1368222..1369205 + 984 WP_012340739.1 tRNA dihydrouridine synthase DusB -
JFL57_RS06000 () 1369199..1369495 + 297 WP_011608721.1 DNA-binding transcriptional regulator Fis -
JFL57_RS06005 () 1369544..1370542 - 999 WP_075294497.1 o-succinylbenzoate synthase -
JFL57_RS06010 () 1370542..1370682 - 141 WP_157665522.1 hypothetical protein -
JFL57_RS06015 () 1370756..1371613 - 858 WP_075294496.1 1,4-dihydroxy-2-naphthoyl-CoA synthase -
JFL57_RS06020 () 1371768..1373069 - 1302 WP_011608718.1 phosphopyruvate hydratase -
JFL57_RS06025 () 1373309..1373887 + 579 WP_075294495.1 restriction endonuclease subunit S -
JFL57_RS06030 () 1373880..1377080 + 3201 WP_198986844.1 HsdR family type I site-specific deoxyribonuclease -
JFL57_RS06035 () 1377086..1378066 + 981 WP_075294494.1 Abi family protein -
JFL57_RS06040 () 1378156..1378719 + 564 WP_087437263.1 restriction endonuclease subunit S -
JFL57_RS06045 () 1378732..1379658 - 927 WP_075294490.1 Transposase from transposon Tn916 ; Integrase Integrase
JFL57_RS06050 () 1379679..1380185 - 507 WP_198986845.1 restriction endonuclease subunit S -
JFL57_RS06055 () 1380312..1380483 - 172 Protein_1164 CTP synthetase -
JFL57_RS06060 () 1380524..1382360 + 1837 Protein_1165 acyltransferase -
JFL57_RS06065 () 1382408..1384036 - 1629 WP_075294488.1 CTP synthase (glutamine hydrolyzing) -
JFL57_RS06070 () 1384263..1386269 - 2007 Protein_1167 transketolase -
JFL57_RS06075 () 1386550..1387056 + 507 WP_012340791.1 S-ribosylhomocysteine lyase VF
JFL57_RS06080 () 1387097..1388278 + 1182 WP_075294519.1 formate-dependent phosphoribosylglycinamide formyltransferase -
JFL57_RS06085 () 1388335..1389357 - 1023 WP_075294486.1 porphobilinogen synthase -
JFL57_RS06090 () 1389423..1390160 - 738 WP_011608704.1 twin-arginine translocase subunit TatC -
JFL57_RS06095 () 1390157..1390711 - 555 WP_075294485.1 Sec-independent protein translocase protein TatB -
JFL57_RS06100 () 1390715..1390936 - 222 WP_075294484.1 Sec-independent protein translocase subunit TatA -
JFL57_RS06105 () 1391041..1392675 - 1635 WP_075294518.1 ubiquinone biosynthesis regulatory protein kinase UbiB -
JFL57_RS06110 () 1392675..1393310 - 636 WP_075294483.1 SCP2 domain-containing protein -
JFL57_RS06115 () 1393319..1394104 - 786 WP_198986846.1 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE VF
JFL57_RS06120 () 1394287..1394997 + 711 WP_012340783.1 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter -
JFL57_RS06125 () 1395687..1395874 + 188 Protein_1178 ShlB/FhaC/HecB family hemolysin secretion/activation protein -
JFL57_RS06130 () 1395909..1399619 + 3711 WP_198986847.1 tRNA nuclease CdiA-2 VF
JFL57_RS06135 () 1399829..1404034 + 4206 WP_198986848.1 hemagglutinin repeat-containing protein -
JFL57_RS06140 () 1404031..1404246 + 216 WP_041605136.1 hypothetical protein -
JFL57_RS06145 () 1404260..1405630 + 1371 WP_157665521.1 VENN motif pre-toxin domain-containing protein -
JFL57_RS06150 () 1405632..1406102 + 471 WP_075293975.1 hypothetical protein -
JFL57_RS06155 () 1406226..1406549 + 324 WP_075293974.1 hypothetical protein -
JFL57_RS06160 () 1406691..1407119 + 429 WP_075293973.1 hypothetical protein -
JFL57_RS06165 () 1407689..1410253 + 2565 WP_198986849.1 hemagglutinin repeat-containing protein -
JFL57_RS06170 () 1410258..1410503 + 246 WP_012340764.1 MafI family immunity protein -
JFL57_RS06175 () 1410556..1410720 + 165 Protein_1188 hypothetical protein -
JFL57_RS06180 () 1410723..1411109 + 387 WP_075293970.1 immunity 41 family protein -
JFL57_RS06185 () 1411106..1412032 + 927 WP_198351870.1 hypothetical protein -
JFL57_RS06190 () 1412023..1412304 + 282 WP_041605126.1 barstar family protein -
JFL57_RS06195 () 1412478..1412906 + 429 WP_075293969.1 hypothetical protein -
JFL57_RS06200 () 1413220..1414326 + 1107 WP_183405667.1 hemagglutinin repeat-containing protein -
JFL57_RS06205 () 1414951..1415145 - 195 WP_136122091.1 hypothetical protein -
JFL57_RS06210 () 1415322..1415768 - 447 WP_075294479.1 terminase -
JFL57_RS06215 () 1415761..1416348 - 588 WP_075294478.1 SocA family protein -
JFL57_RS06220 () 1416361..1416654 - 294 WP_075294477.1 type II toxin-antitoxin system HigB family toxin -
JFL57_RS06225 () 1416793..1417188 - 396 WP_011608692.1 helix-turn-helix domain-containing protein -
JFL57_RS06230 () 1417224..1417490 - 267 WP_041604501.1 type II toxin-antitoxin system RelE/ParE family toxin -
JFL57_RS06235 () 1418034..1419944 - 1911 WP_198986850.1 DNA primase -
JFL57_RS06240 () 1419947..1420474 - 528 WP_183405666.1 hypothetical protein -
JFL57_RS06245 () 1420471..1420839 - 369 WP_041604074.1 hypothetical protein -
JFL57_RS06250 () 1420826..1421044 - 219 WP_075294474.1 hypothetical protein -
JFL57_RS06255 () 1421037..1421519 - 483 WP_075294473.1 hypothetical protein -
JFL57_RS06260 () 1421671..1422198 - 528 WP_081376605.1 ash family protein -
JFL57_RS06265 () 1422212..1422451 - 240 WP_075294472.1 hypothetical protein -
JFL57_RS06270 () 1422452..1422697 - 246 WP_075294471.1 helix-turn-helix domain-containing protein -
JFL57_RS06275 () 1422707..1422928 - 222 WP_012340798.1 AlpA family phage regulatory protein -
JFL57_RS06280 () 1423096..1423605 - 510 WP_075294470.1 hypothetical protein -
JFL57_RS06285 () 1423615..1423872 - 258 WP_075294469.1 hypothetical protein -
JFL57_RS06290 () 1424165..1425412 - 1248 WP_075294468.1 Prophage integrase IntA ; Integrase Integrase
JFL57_RS06295 () 1426163..1426741 + 579 WP_012340801.1 hypothetical protein -
JFL57_RS06300 () 1427473..1427910 - 438 WP_012340802.1 hypothetical protein -
JFL57_RS06305 () 1428060..1428959 + 900 WP_012340803.1 Tyrosine recombinase XerC ; Integrase Integrase
JFL57_RS06310 () 1429232..1430203 - 972 Protein_1215 IS30 family transposase ISApl1 Transposase
JFL57_RS06315 () 1430307..1431317 - 1011 WP_021112546.1 hypothetical protein -
JFL57_RS06320 () 1431337..1431486 + 150 Protein_1217 mobilization protein -
JFL57_RS06325 () 1431487..1432080 + 594 Protein_1218 acyl-CoA--6-aminopenicillanic acid acyl-transferase -
JFL57_RS06330 () 1432234..1433049 - 816 WP_000018321.1 Aminoglycoside 3'-phosphotransferase ARG
JFL57_RS06335 () 1433385..1434221 - 837 WP_000480968.1 hypothetical protein ARG
JFL57_RS06340 () 1434221..1435024 - 804 WP_001082319.1 Aminoglycoside 3'-phosphotransferase ARG
JFL57_RS06345 () 1435193..1436038 - 846 WP_025288851.1 Dihydropteroate synthase ARG
JFL57_RS06350 () 1436201..1437493 + 1293 WP_014325823.1 IS91 family transposase -
JFL57_RS06355 () 1437833..1438090 + 258 Protein_1224 IS91 family transposase -
JFL57_RS06360 () 1438559..1439005 + 447 Protein_1225 DUF3363 domain-containing protein -
JFL57_RS06365 () 1439282..1440496 + 1215 WP_014325824.1 Inner membrane transport protein YdhC ARG
JFL57_RS06370 () 1440524..1440829 + 306 WP_001255015.1 LysR family transcriptional regulator -
JFL57_RS06375 () 1440941..1442434 + 1494 WP_087437258.1 IS91 family transposase ISVsa3 Transposase
JFL57_RS06380 () 1442465..1442794 + 330 Protein_1229 DUF3363 domain-containing protein -
JFL57_RS06385 () 1442766..1443317 - 552 Protein_1230 IS30 family transposase -
JFL57_RS06390 () 1443498..1444262 - 765 WP_014325826.1 Tyrosine recombinase XerD ; Integrase Integrase
JFL57_RS06395 () 1444418..1446397 - 1980 WP_014325827.1 helicase/relaxase domain-containing protein -
JFL57_RS06400 () 1446825..1447622 - 798 WP_014325828.1 type I restriction-modification system subunit M -
JFL57_RS06405 () 1447695..1448441 - 747 WP_012340806.1 hypothetical protein -
JFL57_RS06410 () 1448581..1449555 - 975 WP_012340807.1 DUF1738 domain-containing protein -
JFL57_RS06415 () 1449800..1450207 - 408 WP_012340808.1 hypothetical protein -
JFL57_RS06420 () 1450323..1451165 - 843 WP_012340809.1 hypothetical protein -
JFL57_RS06425 () 1451243..1451638 - 396 WP_012340810.1 hypothetical protein -
JFL57_RS06430 () 1451737..1451982 - 246 WP_012340811.1 hypothetical protein -
JFL57_RS06435 () 1452054..1452407 - 354 WP_012340812.1 hypothetical protein -
JFL57_RS06440 () 1452781..1453224 + 444 WP_012340813.1 TIGR03757 family integrating conjugative element protein -
JFL57_RS06445 () 1453221..1454162 + 942 WP_012340815.1 TIGR03756 family integrating conjugative element protein -
JFL57_RS06450 () 1454180..1456192 + 2013 WP_087437257.1 integrating conjugative element protein -
JFL57_RS06455 () 1456213..1456641 + 429 WP_012340817.1 hypothetical protein -
JFL57_RS06460 () 1456857..1457327 + 471 WP_012340818.1 hypothetical protein -
JFL57_RS06465 () 1457348..1457689 + 342 WP_012340819.1 hypothetical protein -
JFL57_RS06470 () 1457735..1459207 - 1473 WP_012340820.1 conjugal transfer protein TraG N-terminal domain-containing protein -
JFL57_RS06475 () 1459218..1459535 - 318 WP_012340821.1 hypothetical protein -
JFL57_RS06480 () 1459525..1459953 - 429 WP_012340822.1 hypothetical protein -
JFL57_RS06485 () 1459953..1462790 - 2838 WP_012340823.1 conjugative transfer ATPase -
JFL57_RS06490 () 1462793..1463191 - 399 WP_012340824.1 TIGR03751 family conjugal transfer lipoprotein -
JFL57_RS06495 () 1463204..1464658 - 1455 WP_012340826.1 TIGR03752 family integrating conjugative element protein -
JFL57_RS06500 () 1464670..1465554 - 885 WP_012340827.1 TIGR03749 family integrating conjugative element protein -
JFL57_RS06505 () 1465554..1466198 - 645 WP_012340828.1 TIGR03746 family integrating conjugative element protein -
JFL57_RS06510 () 1466202..1466567 - 366 WP_012340829.1 TIGR03750 family conjugal transfer protein -
JFL57_RS06515 () 1466590..1466979 - 390 WP_006248894.1 DUF2976 domain-containing protein -
JFL57_RS06520 () 1466994..1467227 - 234 WP_014325829.1 DUF3262 family protein -
JFL57_RS06525 () 1467227..1467553 - 327 WP_006248892.1 RAQPRD family integrative conjugative element protein -
JFL57_RS06530 () 1467740..1468123 + 384 WP_012340830.1 hypothetical protein -
JFL57_RS06535 () 1468155..1468850 - 696 WP_012340831.1 TIGR03747 family integrating conjugative element membrane protein -
JFL57_RS06540 () 1468847..1469200 - 354 WP_006248889.1 hypothetical protein -
JFL57_RS06545 () 1469193..1471394 - 2202 WP_014325830.1 type IV conjugative transfer system coupling protein TraD -
JFL57_RS06550 () 1471394..1471900 - 507 WP_012340834.1 integrating conjugative element protein -
JFL57_RS06555 () 1471903..1472673 - 771 WP_012340835.1 hypothetical protein -
JFL57_RS06560 () 1472652..1473425 - 774 WP_006248885.1 TIGR03759 family integrating conjugative element protein -
JFL57_RS06565 () 1473425..1474054 - 630 WP_006248884.1 hypothetical protein VF
JFL57_RS06570 () 1474213..1474473 - 261 WP_006248882.1 hypothetical protein -
JFL57_RS06575 () 1474586..1474948 - 363 WP_006248881.1 hypothetical protein -
JFL57_RS06580 () 1475028..1475435 - 408 WP_014325831.1 hypothetical protein -
JFL57_RS06585 () 1475461..1476141 - 681 WP_006248879.1 hypothetical protein -
JFL57_RS06590 () 1476247..1476678 - 432 WP_006248878.1 DUF3577 domain-containing protein -
JFL57_RS06595 () 1477298..1477435 + 138 WP_155242642.1 hypothetical protein -
JFL57_RS06600 () 1477496..1479547 - 2052 WP_012340838.1 DNA topoisomerase III -
JFL57_RS06605 () 1479707..1480225 - 519 WP_006248876.1 hypothetical protein -
JFL57_RS06610 () 1480702..1481412 + 711 WP_006248874.1 hypothetical protein -
JFL57_RS06615 () 1481951..1482718 - 768 WP_012340839.1 aldo/keto reductase -
JFL57_RS06620 () 1482717..1483037 + 321 WP_006248872.1 hypothetical protein -
JFL57_RS06625 () 1483219..1483674 + 456 WP_005612095.1 DUF411 domain-containing protein -
JFL57_RS06630 () 1483689..1485236 + 1548 WP_006248871.1 multicopper oxidase family protein -
JFL57_RS06635 () 1485326..1485481 - 156 WP_012340841.1 alcohol dehydrogenase catalytic domain-containing protein -
JFL57_RS06640 () 1485570..1485749 + 180 WP_006248870.1 hypothetical protein -
JFL57_RS06645 () 1485798..1486316 + 519 WP_006248869.1 hypothetical protein -
JFL57_RS06650 () 1486319..1486942 - 624 WP_006248868.1 Tetracycline repressor protein class H VF
JFL57_RS06655 () 1487034..1488236 + 1203 WP_006248867.1 Tetracycline resistance protein, class B ARG
JFL57_RS06660 () 1488332..1489642 - 1311 WP_011200814.1 ISL3 family transposase ISPst9 Transposase
JFL57_RS06665 () 1489642..1489944 - 303 WP_011200813.1 hypothetical protein -
JFL57_RS06670 () 1489985..1490173 - 189 WP_011200812.1 hypothetical protein -
JFL57_RS06675 () 1490480..1490932 - 453 WP_012340854.1 single-stranded DNA-binding protein -
JFL57_RS06680 () 1491288..1491773 - 486 WP_012340855.1 DUF3158 family protein -
JFL57_RS06685 () 1491782..1492540 - 759 WP_012340856.1 TIGR03761 family integrating conjugative element protein -
JFL57_RS06690 () 1492719..1493909 - 1191 WP_014325837.1 hypothetical protein -
JFL57_RS06695 () 1494068..1494625 - 558 WP_012340858.1 DUF2857 domain-containing protein -
JFL57_RS06700 () 1494618..1496264 - 1647 WP_012340859.1 ParB N-terminal domain-containing protein -
JFL57_RS06705 () 1496273..1497634 - 1362 WP_012340860.1 replicative DNA helicase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance