NZ_CP066552833496..1047599

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 214104 bp
Accession: NZ_CP066552        Location: 833496..1047599         Organism: Pectobacterium carotovorum strain 2A       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JFY74_RS03665 () 829920..832286 - 2367 WP_198998177.1 DNA polymerase II -
JFY74_RS03670 () 832399..833979 - 1581 WP_198998178.1 sensor domain-containing diguanylate cyclase -
JFY74_RS03675 () 834339..835109 + 771 WP_198998179.1 DedA family protein -
JFY74_RS03680 () 835145..835456 - 312 WP_103162297.1 acetolactate synthase small subunit -
JFY74_RS03685 () 835462..837126 - 1665 WP_198998180.1 acetolactate synthase large subunit -
JFY74_RS03690 () 837644..839266 + 1623 WP_198998181.1 family 43 glycosylhydrolase -
JFY74_RS03695 () 839271..839981 - 711 WP_198998182.1 Vitamin B12 import ATP-binding protein BtuD VF
JFY74_RS03700 () 839968..841575 - 1608 WP_198998183.1 thiamine/thiamine pyrophosphate ABC transporter permease ThiP -
JFY74_RS03705 () 841551..842531 - 981 WP_198999038.1 thiamine ABC transporter substrate binding subunit -
JFY74_RS03710 () 842749..844407 - 1659 WP_198998184.1 HTH-type transcriptional regulator SgrR -
JFY74_RS03715 () 844498..844662 + 165 WP_198998185.1 glucose uptake inhibitor SgrT -
JFY74_RS03720 () 844808..845368 - 561 WP_198998186.1 hypothetical protein -
JFY74_RS03725 () 845398..845625 - 228 WP_198998187.1 hypothetical protein -
JFY74_RS03730 () 846315..847934 + 1620 WP_198998188.1 hypothetical protein VF
JFY74_RS03735 () 848158..848994 + 837 WP_198998189.1 AraC family transcriptional regulator -
JFY74_RS03740 () 849297..850031 + 735 WP_198998190.1 AzlC family ABC transporter permease -
JFY74_RS03745 () 850028..850339 + 312 WP_039470036.1 AzlD domain-containing protein -
JFY74_RS03750 () 850596..851198 - 603 WP_198998191.1 3-isopropylmalate dehydratase small subunit -
JFY74_RS03755 () 851212..852612 - 1401 WP_010298066.1 3-isopropylmalate dehydratase large subunit -
JFY74_RS03760 () 852615..853706 - 1092 WP_039465791.1 3-isopropylmalate dehydrogenase -
JFY74_RS03765 () 853706..855304 - 1599 WP_198998192.1 2-isopropylmalate synthase -
JFY74_RS03770 () 855715..857520 + 1806 WP_198998193.1 long-chain fatty acid--CoA ligase -
JFY74_RS03775 () 858006..859724 + 1719 WP_198998194.1 acetolactate synthase 3 large subunit -
JFY74_RS03780 () 859727..860218 + 492 WP_010298051.1 acetolactate synthase small subunit -
JFY74_RS03785 () 860486..861490 + 1005 WP_010298048.1 catabolite repressor/activator -
JFY74_RS03790 () 861557..861994 - 438 WP_198998195.1 L-alanine exporter AlaE -
JFY74_RS03795 () 862881..863339 + 459 WP_198998196.1 division/cell wall cluster transcriptional repressor MraZ -
JFY74_RS03800 () 863342..864286 + 945 WP_103861877.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
JFY74_RS03805 () 864283..864603 + 321 WP_039278301.1 cell division protein FtsL -
JFY74_RS03810 () 864627..866390 + 1764 WP_198998197.1 peptidoglycan glycosyltransferase FtsI -
JFY74_RS03815 () 866377..867864 + 1488 WP_198998198.1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase -
JFY74_RS03820 () 867861..869222 + 1362 WP_198998199.1 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase -
JFY74_RS03825 () 869216..870298 + 1083 WP_198998200.1 Phospho-N-acetylmuramoyl-pentapeptide- transferase VF
JFY74_RS03830 () 870302..871618 + 1317 WP_198998201.1 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase -
JFY74_RS03835 () 871618..872820 + 1203 WP_198998202.1 cell division protein FtsW -
JFY74_RS03840 () 872817..873908 + 1092 WP_198998203.1 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase -
JFY74_RS03845 () 873970..875430 + 1461 WP_198998204.1 UDP-N-acetylmuramate--L-alanine ligase -
JFY74_RS03850 () 875439..876359 + 921 WP_198998205.1 D-alanine--D-alanine ligase -
JFY74_RS03855 () 876361..877185 + 825 WP_198998206.1 cell division protein FtsQ -
JFY74_RS03860 () 877239..878495 + 1257 WP_010298002.1 cell division protein FtsA -
JFY74_RS03865 () 878564..879715 + 1152 WP_005975217.1 cell division protein FtsZ -
JFY74_RS03870 () 879820..880737 + 918 WP_029367880.1 hypothetical protein VF
JFY74_RS03875 () 880756..881283 - 528 WP_103861870.1 DUF721 domain-containing protein -
JFY74_RS03880 () 881310..881825 + 516 WP_185894024.1 secA translation cis-regulator SecM -
JFY74_RS03885 () 881938..884640 + 2703 WP_198998207.1 preprotein translocase subunit SecA -
JFY74_RS03890 () 884731..885126 + 396 WP_039470056.1 8-oxo-dGTP diphosphatase MutT -
JFY74_RS03895 () 885191..885385 - 195 WP_010297975.1 DNA gyrase inhibitor YacG -
JFY74_RS03900 () 885443..886195 - 753 WP_039470059.1 cell division protein ZapD -
JFY74_RS03905 () 886188..886814 - 627 WP_198998208.1 dephospho-CoA kinase -
JFY74_RS03910 () 887233..888249 + 1017 WP_198998209.1 GMP reductase -
JFY74_RS03915 () 888359..889564 - 1206 WP_180781539.1 protein transport protein HofC -
JFY74_RS03920 () 889561..891045 - 1485 WP_198998210.1 hypothetical protein VF
JFY74_RS03925 () 891048..891494 - 447 WP_198998211.1 hypothetical protein VF
JFY74_RS03930 () 891814..892704 - 891 WP_198998212.1 carboxylating nicotinate-nucleotide diphosphorylase -
JFY74_RS03935 () 892850..893710 - 861 WP_039470072.1 nucleoside-specific channel-forming protein Tsx -
JFY74_RS03940 () 894134..894706 + 573 WP_198998213.1 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD -
JFY74_RS03945 () 894706..895560 + 855 WP_198998214.1 beta-lactamase regulator AmpE -
JFY74_RS03950 () 895635..896993 - 1359 WP_014916632.1 amino acid permease -
JFY74_RS03955 () 897676..898440 + 765 WP_198998215.1 pyruvate dehydrogenase complex transcriptional repressor PdhR -
JFY74_RS03960 () 898582..901245 + 2664 WP_010306325.1 pyruvate dehydrogenase (acetyl-transferring), homodimeric type -
JFY74_RS03965 () 901260..903146 + 1887 WP_039541371.1 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase -
JFY74_RS03970 () 903479..904903 + 1425 WP_010306320.1 dihydrolipoyl dehydrogenase -
JFY74_RS03975 () 905070..906248 + 1179 WP_198998216.1 alpha/beta fold hydrolase -
JFY74_RS03980 () 906487..908199 + 1713 WP_198998217.1 hypothetical protein -
JFY74_RS03985 () 908298..909626 - 1329 WP_198998218.1 MmgE/PrpD family protein -
JFY74_RS03990 () 909737..910720 - 984 WP_198998219.1 AraC family transcriptional regulator -
JFY74_RS03995 () 911143..913437 + 2295 WP_198998220.1 Vitamin B12 transporter BtuB VF
JFY74_RS04000 () 913533..913844 - 312 WP_198998221.1 metalloregulator ArsR/SmtB family transcription factor -
JFY74_RS04005 () 914324..916921 + 2598 WP_198998222.1 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase -
JFY74_RS04010 () 917108..917467 + 360 WP_039470104.1 protein YacL -
JFY74_RS04015 () 917547..918145 - 599 Protein_780 fructose-6-phosphate aldolase -
JFY74_RS04020 () 918454..919491 - 1038 WP_198998223.1 fatty acid desaturase -
JFY74_RS04025 () 919539..921155 - 1617 WP_198998224.1 acyl-CoA dehydrogenase family protein -
JFY74_RS04030 () 921783..922109 - 327 WP_010300406.1 multidrug efflux SMR transporter -
JFY74_RS04035 () 922121..922543 - 423 WP_100018188.1 multidrug efflux SMR transporter -
JFY74_RS04040 () 922629..923579 - 951 WP_198998225.1 choline TMA-lyase-activating enzyme -
JFY74_RS04045 () 923683..926178 - 2496 WP_198998226.1 choline trimethylamine-lyase -
JFY74_RS04050 () 926754..927443 - 690 WP_198998227.1 Accessory gene regulator protein B VF
JFY74_RS04055 () 927489..927956 - 468 WP_198998228.1 YhcH/YjgK/YiaL family protein -
JFY74_RS04060 () 928220..929407 - 1188 WP_198998229.1 exo-alpha-sialidase -
JFY74_RS04065 () 929411..930826 - 1416 WP_198998230.1 sodium:solute symporter family protein -
JFY74_RS04070 () 930865..931749 - 885 WP_119158179.1 dihydrodipicolinate synthase family protein -
JFY74_RS04075 () 931923..933059 - 1137 WP_198998231.1 iron-containing alcohol dehydrogenase -
JFY74_RS04080 () 933296..934624 + 1329 WP_198998232.1 four-carbon acid sugar kinase family protein -
JFY74_RS04085 () 934617..935597 + 981 WP_198998233.1 Aromatic-amino-acid aminotransferase VF
JFY74_RS04090 () 935802..936617 + 816 WP_119881353.1 DeoR/GlpR family DNA-binding transcription regulator -
JFY74_RS04095 () 936681..937559 - 879 WP_198998234.1 HTH-type transcriptional repressor YtrA VF
JFY74_RS04100 () 937600..938454 - 855 WP_010300359.1 ABC transporter ATP-binding protein YtrB VF
JFY74_RS04105 () 938451..939161 - 711 WP_198999039.1 Vitamin B12 import ATP-binding protein BtuD VF
JFY74_RS04110 () 939711..941534 - 1824 WP_198998235.1 metallophosphoesterase -
JFY74_RS04115 () 941576..942481 - 906 WP_198998236.1 glucosamine kinase -
JFY74_RS04120 () 942478..943029 - 552 WP_198998237.1 glucosamine kinase -
JFY74_RS04125 () 943026..944333 - 1308 WP_198998238.1 ABC transporter substrate-binding protein -
JFY74_RS04130 () 944901..947363 + 2463 WP_198998239.1 hypothetical protein -
JFY74_RS04135 () 947365..948471 + 1107 WP_039490807.1 glycoside hydrolase family 88 protein -
JFY74_RS04140 () 948474..949565 + 1092 WP_198998240.1 Vitamin B12 import ATP-binding protein BtuD VF
JFY74_RS04145 () 949589..950587 + 999 WP_198998241.1 sugar ABC transporter permease -
JFY74_RS04150 () 950596..951648 + 1053 WP_010295141.1 carbohydrate ABC transporter permease -
JFY74_RS04155 () 951648..952685 + 1038 WP_198998242.1 LacI family transcriptional regulator -
JFY74_RS04160 () 952791..953249 - 459 WP_102117304.1 GNAT family N-acetyltransferase -
JFY74_RS04165 () 953627..954109 - 483 WP_130636740.1 hypothetical protein -
JFY74_RS04170 () 954194..954751 - 558 WP_116155441.1 single-stranded DNA-binding protein SSB1 -
JFY74_RS04175 () 955078..957912 + 2835 WP_198998243.1 excinuclease ABC subunit UvrA -
JFY74_RS04180 () 957928..958347 + 420 WP_130623462.1 secondary thiamine-phosphate synthase enzyme YjbQ -
JFY74_RS04185 () 958783..959337 - 555 WP_198998244.1 type I-F CRISPR-associated endoribonuclease Cas6/Csy4 -
JFY74_RS04190 () 959347..960357 - 1011 WP_198998245.1 type I-F CRISPR-associated protein Csy3 -
JFY74_RS04195 () 960371..961303 - 933 WP_198998246.1 type I-F CRISPR-associated protein Csy2 -
JFY74_RS04200 () 961300..962634 - 1335 WP_198998247.1 type I-F CRISPR-associated protein Csy1 -
JFY74_RS04205 () 962658..965954 - 3297 WP_198998248.1 type I-F CRISPR-associated helicase Cas3 -
JFY74_RS04210 () 965951..966931 - 981 WP_103861796.1 type I-F CRISPR-associated endonuclease Cas1f -
JFY74_RS04215 () 968696..969553 + 858 WP_198998249.1 hypothetical protein -
JFY74_RS04220 () 969546..969950 + 405 WP_198998250.1 DUF1240 domain-containing protein -
JFY74_RS04225 () 969995..970399 + 405 WP_072012976.1 DUF1240 domain-containing protein -
JFY74_RS04230 () 970447..970851 + 405 WP_198998251.1 DUF1240 domain-containing protein -
JFY74_RS04235 () 970898..971305 + 408 WP_180780453.1 DUF1240 domain-containing protein -
JFY74_RS04240 () 971358..971837 - 480 WP_010295094.1 hypothetical protein VF
JFY74_RS04245 () 971956..972459 - 504 WP_039507077.1 M48 family metallopeptidase -
JFY74_RS04250 () 972628..973821 - 1194 WP_198998252.1 aspartate/tyrosine/aromatic aminotransferase -
JFY74_RS04255 () 973885..974499 - 615 WP_198998253.1 YitT family protein -
JFY74_RS04260 () 974751..975230 - 480 WP_010295086.1 Lrp/AsnC family transcriptional regulator -
JFY74_RS04265 () 976804..977031 + 228 WP_011095187.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
JFY74_RS04270 () 977028..977444 + 417 WP_180790514.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
JFY74_RS04275 () 977583..978221 - 639 WP_198998254.1 hypothetical protein -
JFY74_RS04280 () 978214..979296 - 1083 WP_198998255.1 alanine racemase -
JFY74_RS04285 () 979338..980744 - 1407 WP_010295074.1 replicative DNA helicase -
JFY74_RS04290 () 981066..982049 + 984 WP_198998256.1 L-threonine 3-dehydrogenase VF
JFY74_RS04295 () 982135..982374 + 240 WP_198998257.1 hypothetical protein -
JFY74_RS04300 () 982398..982670 - 273 WP_198998258.1 envelope stress response protein PspG -
JFY74_RS04305 () 982837..983871 - 1035 WP_198998259.1 tRNA dihydrouridine(20/20a) synthase DusA -
JFY74_RS04310 () 983961..985052 + 1092 WP_198998260.1 Tyrosine recombinase XerC ; Integrase Integrase
JFY74_RS04315 () 985255..985794 - 540 WP_198998261.1 hypothetical protein -
JFY74_RS04320 () 985890..987104 - 1215 WP_198998262.1 hypothetical protein -
JFY74_RS04325 () 987227..987880 - 654 WP_198998263.1 hypothetical protein -
JFY74_RS04330 () 988145..988537 + 393 WP_198998264.1 hypothetical protein -
JFY74_RS04335 () 989068..989385 + 318 WP_198998265.1 hypothetical protein -
JFY74_RS04340 () 989632..989820 + 189 WP_198998266.1 helix-turn-helix domain-containing protein -
JFY74_RS04345 () 989834..991516 + 1683 WP_198998267.1 DUF927 domain-containing protein -
JFY74_RS04350 () 991566..991841 + 276 WP_198998268.1 pyocin activator PrtN family protein -
JFY74_RS04355 () 992029..992568 + 540 WP_198998269.1 type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein -
JFY74_RS04360 () 992558..993481 + 924 WP_198998270.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein -
JFY74_RS04365 () 993817..993954 + 138 WP_198998271.1 hypothetical protein -
JFY74_RS04370 () 993943..994569 - 627 WP_198998272.1 LysE family transporter -
JFY74_RS04375 () 994609..994980 + 372 WP_198998273.1 hypothetical protein -
JFY74_RS04380 () 995372..995968 + 597 WP_198998274.1 hypothetical protein -
JFY74_RS04385 () 996116..996262 - 147 WP_198999040.1 hypothetical protein -
JFY74_RS04390 () 996274..996768 - 495 Protein_855 integrase arm-type DNA-binding domain-containing protein -
JFY74_RS04395 () 997291..998433 + 1143 WP_198998275.1 Fic family protein -
JFY74_RS04400 () 998550..998984 - 435 WP_198998276.1 hypothetical protein -
JFY74_RS04405 () 998978..999796 - 819 WP_198998277.1 helicase -
JFY74_RS04410 () 999895..1000992 + 1098 WP_198998278.1 ISAs1 family transposase ISPlu18 Transposase
JFY74_RS04415 () 1001430..1001750 + 321 WP_044208336.1 hypothetical protein -
JFY74_RS04420 () 1001752..1001991 + 240 WP_080738460.1 TIGR03758 family integrating conjugative element protein -
JFY74_RS04425 () 1002018..1002359 + 342 WP_044208334.1 TIGR03745 family integrating conjugative element membrane protein -
JFY74_RS04430 () 1002369..1002731 + 363 WP_044208332.1 TIGR03750 family conjugal transfer protein -
JFY74_RS04435 () 1002728..1003384 + 657 WP_044208330.1 TIGR03746 family integrating conjugative element protein -
JFY74_RS04440 () 1003387..1004307 + 921 WP_044208329.1 TIGR03749 family integrating conjugative element protein -
JFY74_RS04445 () 1004297..1005835 + 1539 WP_044208327.1 TIGR03752 family integrating conjugative element protein -
JFY74_RS04450 () 1005845..1006288 + 444 WP_044208325.1 hypothetical protein -
JFY74_RS04455 () 1006281..1006691 + 411 WP_044208323.1 TIGR03751 family conjugal transfer lipoprotein -
JFY74_RS04460 () 1006691..1009372 + 2682 Protein_869 conjugative transfer ATPase -
JFY74_RS04465 () 1009436..1010949 + 1514 WP_198997316.1 IS3 family transposase ISAs20 Transposase
JFY74_RS04470 () 1011023..1011163 + 141 WP_198998279.1 hypothetical protein -
JFY74_RS04475 () 1011160..1011576 + 417 WP_044208319.1 hypothetical protein -
JFY74_RS04480 () 1011609..1012352 - 744 WP_044208317.1 hypothetical protein -
JFY74_RS04485 () 1012619..1013020 + 402 WP_044208315.1 TIGR03757 family integrating conjugative element protein -
JFY74_RS04490 () 1013017..1013991 + 975 WP_044208313.1 TIGR03756 family integrating conjugative element protein -
JFY74_RS04495 () 1014001..1015425 + 1425 WP_044208311.1 integrating conjugative element protein -
JFY74_RS04500 () 1015428..1015799 + 372 WP_044208310.1 hypothetical protein -
JFY74_RS04505 () 1015796..1017319 + 1524 WP_044208308.1 conjugal transfer protein TraG N-terminal domain-containing protein -
JFY74_RS04510 () 1017354..1017677 - 324 WP_125232262.1 hypothetical protein -
JFY74_RS04515 () 1017748..1018563 - 816 WP_044208306.1 Tyrosine recombinase XerD ; Integrase Integrase
JFY74_RS04520 () 1018560..1018898 - 339 WP_044208304.1 hypothetical protein -
JFY74_RS04525 () 1018941..1019741 - 801 WP_044208301.1 hypothetical protein -
JFY74_RS04530 () 1019903..1020190 - 288 WP_044208298.1 hypothetical protein -
JFY74_RS04535 () 1020881..1021861 + 981 WP_044208295.1 hypothetical protein -
JFY74_RS04540 () 1021929..1022108 - 180 WP_044208292.1 hypothetical protein -
JFY74_RS04545 () 1022240..1023742 - 1503 WP_044208377.1 RES family NAD+ phosphorylase -
JFY74_RS04550 () 1023932..1024381 - 450 WP_044208290.1 hypothetical protein -
JFY74_RS04555 () 1024696..1025652 + 957 WP_198998280.1 hypothetical protein -
JFY74_RS04560 () 1026785..1027675 + 891 WP_198998281.1 hypothetical protein ; Integrase Integrase
JFY74_RS04565 () 1027683..1027973 - 291 WP_072014140.1 hypothetical protein -
JFY74_RS04570 () 1028408..1028683 + 276 WP_044206456.1 hypothetical protein -
JFY74_RS04575 () 1028766..1029089 + 324 WP_044206453.1 hypothetical protein -
JFY74_RS04580 () 1029178..1029483 + 306 WP_155278027.1 hypothetical protein -
JFY74_RS04585 () 1029557..1030072 + 516 WP_044206451.1 hypothetical protein -
JFY74_RS04590 () 1030162..1030803 + 642 WP_044206448.1 antirestriction protein -
JFY74_RS04595 () 1030898..1031302 + 405 WP_198998282.1 hypothetical protein -
JFY74_RS04600 () 1031400..1031870 + 471 WP_198998283.1 hypothetical protein -
JFY74_RS04605 () 1031977..1032453 + 477 WP_198998284.1 DNA repair protein RadC -
JFY74_RS04610 () 1032560..1032769 + 210 WP_039507466.1 hypothetical protein -
JFY74_RS04615 () 1032781..1033221 + 441 WP_198998285.1 hypothetical protein -
JFY74_RS04620 () 1033218..1033496 + 279 WP_198998286.1 hypothetical protein -
JFY74_RS04625 () 1033568..1034053 + 486 WP_198998287.1 hypothetical protein -
JFY74_RS04630 () 1034109..1036064 + 1956 WP_198998288.1 DUF1738 domain-containing protein -
JFY74_RS04635 () 1036138..1037031 + 894 WP_198998289.1 hypothetical protein -
JFY74_RS04640 () 1037104..1038030 + 927 WP_198998290.1 hypothetical protein -
JFY74_RS04645 () 1038136..1038948 - 813 WP_198998291.1 hypothetical protein -
JFY74_RS04650 () 1039271..1039927 + 657 WP_198998292.1 hypothetical protein -
JFY74_RS04655 () 1039962..1040426 - 465 WP_198998293.1 hypothetical protein -
JFY74_RS04660 () 1040544..1041953 + 1410 Protein_909 UvrD-helicase domain-containing protein -
JFY74_RS04665 () 1042578..1045037 + 2460 WP_198998294.1 AAA family ATPase -
JFY74_RS04670 () 1045186..1046778 + 1593 WP_198998295.1 TraI domain-containing protein -
JFY74_RS04675 () 1046865..1047887 + 1023 WP_198998296.1 site-specific integrase -
JFY74_RS04685 () 1048825..1050978 + 2154 WP_198998297.1 ornithine decarboxylase -
JFY74_RS04690 () 1051055..1052506 - 1452 WP_198998298.1 L-asparagine permease -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance