MGE detailed information
MGE type: Prophage MGE length: 42245 bp
Accession: NZ_CP066376 Location: 1931567..1973811 Organism: Staphylococcus epidermidis strain PH1-28 Replicon: chromosome
Accession: NZ_CP066376 Location: 1931567..1973811 Organism: Staphylococcus epidermidis strain PH1-28 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ICN77_RS09695 () | 1926831..1927658 | - | 828 | WP_002456119.1 | sulfite exporter TauE/SafE family protein | - |
| ICN77_RS09700 () | 1927671..1928519 | - | 849 | WP_001831962.1 | DUF72 domain-containing protein | - |
| ICN77_RS09705 () | 1928886..1929911 | - | 1026 | WP_002494698.1 | DUF21 domain-containing protein | - |
| ICN77_RS09710 () | 1930414..1930767 | - | 354 | WP_002495357.1 | hypothetical protein | - |
| ICN77_RS09715 () | 1930758..1930904 | - | 147 | WP_001831994.1 | hypothetical protein | - |
| ICN77_RS09720 () | 1932744..1934207 | - | 1464 | WP_002498281.1 | SH3 domain-containing protein | - |
| ICN77_RS09725 () | 1934182..1934592 | - | 411 | WP_002498282.1 | phage holin | - |
| ICN77_RS09730 () | 1934656..1935054 | - | 399 | WP_002498283.1 | YxeA family protein | - |
| ICN77_RS09735 () | 1935212..1935619 | - | 408 | WP_002498284.1 | hypothetical protein | - |
| ICN77_RS09740 () | 1935606..1936031 | - | 426 | WP_002498285.1 | hypothetical protein | - |
| ICN77_RS09745 () | 1936028..1936651 | - | 624 | WP_032605911.1 | poly-gamma-glutamate hydrolase family protein | - |
| ICN77_RS09750 () | 1936656..1937870 | - | 1215 | WP_198895689.1 | BppU family phage baseplate upper protein | - |
| ICN77_RS09755 () | 1937900..1939732 | - | 1833 | WP_002498288.1 | DUF2817 domain-containing protein | - |
| ICN77_RS09760 () | 1939748..1939921 | - | 174 | WP_002498289.1 | hypothetical protein | - |
| ICN77_RS09765 () | 1939914..1941473 | - | 1560 | WP_002498290.1 | prophage endopeptidase tail family protein | - |
| ICN77_RS09770 () | 1941483..1942316 | - | 834 | WP_002468177.1 | phage tail family protein | - |
| ICN77_RS09775 () | 1942318..1946796 | - | 4479 | WP_002498292.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| ICN77_RS09780 () | 1946825..1946977 | - | 153 | WP_002503474.1 | hypothetical protein | - |
| ICN77_RS09785 () | 1947010..1947372 | - | 363 | WP_002498293.1 | hypothetical protein | - |
| ICN77_RS09790 () | 1947443..1947628 | - | 186 | WP_002498294.1 | hypothetical protein | - |
| ICN77_RS09795 () | 1947647..1948279 | - | 633 | WP_002474301.1 | phage tail protein | - |
| ICN77_RS09800 () | 1948292..1948696 | - | 405 | WP_002498295.1 | hypothetical protein | - |
| ICN77_RS09805 () | 1948699..1949103 | - | 405 | WP_192832167.1 | hypothetical protein | - |
| ICN77_RS09810 () | 1949100..1949429 | - | 330 | WP_002498297.1 | hypothetical protein | - |
| ICN77_RS09815 () | 1949419..1949760 | - | 342 | WP_002498298.1 | head-tail connector protein | - |
| ICN77_RS09820 () | 1949779..1951139 | - | 1361 | Protein_1757 | phage major capsid protein | - |
| ICN77_RS09825 () | 1951181..1951738 | - | 558 | WP_002498300.1 | HK97 family phage prohead protease | - |
| ICN77_RS09830 () | 1951728..1952960 | - | 1233 | WP_002498301.1 | phage portal protein | - |
| ICN77_RS09835 () | 1953170..1954921 | - | 1752 | WP_002498303.1 | terminase large subunit | - |
| ICN77_RS09840 () | 1954914..1955384 | - | 471 | WP_002498304.1 | phage terminase small subunit P27 family | - |
| ICN77_RS09845 () | 1955527..1955877 | - | 351 | WP_002498305.1 | HNH endonuclease | - |
| ICN77_RS09850 () | 1956468..1956914 | - | 447 | WP_002468152.1 | transcriptional regulator | - |
| ICN77_RS09855 () | 1956931..1957080 | - | 150 | WP_002468131.1 | DUF1514 domain-containing protein | - |
| ICN77_RS09860 () | 1957123..1957263 | - | 141 | WP_002468120.1 | hypothetical protein | - |
| ICN77_RS09865 () | 1957368..1957670 | + | 303 | WP_002498306.1 | hypothetical protein | - |
| ICN77_RS09870 () | 1957790..1958212 | - | 423 | WP_002468111.1 | dUTP diphosphatase | - |
| ICN77_RS09875 () | 1958326..1958586 | + | 261 | WP_002468142.1 | hypothetical protein | - |
| ICN77_RS09880 () | 1958604..1958804 | - | 201 | WP_002468135.1 | hypothetical protein | - |
| ICN77_RS09885 () | 1958794..1959246 | - | 453 | WP_002498308.1 | DUF3310 domain-containing protein | - |
| ICN77_RS09890 () | 1959243..1959602 | - | 360 | WP_002498309.1 | hypothetical protein | - |
| ICN77_RS09895 () | 1959603..1959800 | - | 198 | WP_002468127.1 | hypothetical protein | - |
| ICN77_RS09900 () | 1959801..1960208 | - | 408 | WP_002468165.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ICN77_RS09905 () | 1960217..1960462 | - | 246 | WP_002498310.1 | hypothetical protein | - |
| ICN77_RS09910 () | 1960462..1960623 | - | 162 | WP_002468163.1 | hypothetical protein | - |
| ICN77_RS09915 () | 1960617..1961387 | - | 771 | WP_002498311.1 | ATP-binding protein | - |
| ICN77_RS09920 () | 1961400..1962173 | - | 774 | WP_002498312.1 | conserved phage C-terminal domain-containing protein | - |
| ICN77_RS09925 () | 1962217..1962699 | + | 483 | WP_002498313.1 | hypothetical protein | - |
| ICN77_RS09930 () | 1962715..1963386 | - | 672 | WP_002498314.1 | hypothetical protein | - |
| ICN77_RS09935 () | 1963398..1963952 | - | 555 | WP_198895690.1 | single-stranded DNA-binding protein | - |
| ICN77_RS09940 () | 1963981..1964757 | - | 777 | WP_002468156.1 | ATP-binding protein | - |
| ICN77_RS09945 () | 1964758..1965243 | - | 486 | WP_002498316.1 | siphovirus Gp157 family protein | - |
| ICN77_RS09950 () | 1965227..1965490 | - | 264 | WP_002468154.1 | hypothetical protein | - |
| ICN77_RS09955 () | 1965556..1965738 | - | 183 | WP_002498317.1 | hypothetical protein | - |
| ICN77_RS09960 () | 1965735..1965950 | - | 216 | WP_002468180.1 | hypothetical protein | - |
| ICN77_RS09965 () | 1966058..1966261 | + | 204 | WP_002468183.1 | hypothetical protein | - |
| ICN77_RS09970 () | 1966369..1966857 | - | 489 | WP_002498318.1 | ORF6C domain-containing protein | - |
| ICN77_RS09975 () | 1966916..1967296 | + | 381 | WP_002498319.1 | DUF2513 domain-containing protein | - |
| ICN77_RS09980 () | 1967288..1967464 | - | 177 | WP_002498320.1 | hypothetical protein | - |
| ICN77_RS09985 () | 1967475..1968392 | - | 918 | WP_002498321.1 | hypothetical protein | - |
| ICN77_RS09990 () | 1968407..1968643 | - | 237 | WP_198895691.1 | helix-turn-helix domain-containing protein | - |
| ICN77_RS09995 () | 1968796..1969110 | + | 315 | WP_002498323.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| ICN77_RS10000 () | 1969123..1969584 | + | 462 | WP_002484735.1 | ImmA/IrrE family metallo-endopeptidase | Toxin Detail |
| ICN77_RS10005 () | 1969753..1969920 | + | 168 | WP_002498324.1 | hypothetical protein | - |
| ICN77_RS10010 () | 1969942..1971081 | + | 1140 | WP_002498325.1 | CapA family protein | - |
| ICN77_RS10015 () | 1971297..1972346 | + | 1050 | WP_002498326.1 | site-specific integrase | - |
| ICN77_RS10020 () | 1972414..1973811 | - | 1398 | WP_002498327.1 | Fe-S cluster assembly protein SufB | - |
| ICN77_RS10025 () | 1974017..1974481 | - | 465 | WP_001831954.1 | SUF system NifU family Fe-S cluster assembly protein | - |
| ICN77_RS10030 () | 1974471..1975712 | - | 1242 | WP_002468879.1 | cysteine desulfurase | - |
| ICN77_RS10035 () | 1975780..1977087 | - | 1308 | WP_001831898.1 | Fe-S cluster assembly protein SufD | - |
| ICN77_RS10040 () | 1977182..1977943 | - | 762 | WP_001831944.1 | Fe-S cluster assembly ATPase SufC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|