MGE detailed information
MGE type: Genomic_island MGE length: 12810 bp
Accession: NZ_CP066366 Location: 2280136..2292945 Organism: Escherichia coli strain AR Bank #0346 Replicon: chromosome
Accession: NZ_CP066366 Location: 2280136..2292945 Organism: Escherichia coli strain AR Bank #0346 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNX50_RS11115 (2280136) | 2280136..2280402 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| FNX50_RS11120 (2280402) | 2280402..2281724 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| FNX50_RS11125 (2282036) | 2282036..2282244 | + | 209 | Protein_2196 | AraC family transcriptional regulator | - |
| FNX50_RS11130 (2282499) | 2282499..2283725 | + | 1227 | Protein_2197 | Outer membrane usher protein FimD | VF |
| FNX50_RS11135 (2283739) | 2283739..2284269 | + | 531 | WP_000876763.1 | Protein FimF | VF |
| FNX50_RS11140 (2284282) | 2284282..2284785 | + | 504 | WP_000825452.1 | Protein FimG | VF |
| FNX50_RS11145 (2284844) | 2284844..2285758 | + | 915 | WP_000520662.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| FNX50_RS11150 (2286092) | 2286092..2288371 | + | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| FNX50_RS11155 (2288619) | 2288619..2288816 | + | 198 | WP_000543384.1 | two-component system connector SafA | - |
| FNX50_RS11160 (2288891) | 2288891..2289652 | + | 762 | WP_000060492.1 | acid stress response transcriptional regulator YdeO | - |
| FNX50_RS11165 (2290054) | 2290054..2291736 | + | 1683 | WP_001295684.1 | sulfatase | - |
| FNX50_RS11170 (2291788) | 2291788..2292945 | + | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| FNX50_RS11175 (2292911) | 2292911..2293033 | - | 123 | WP_123039029.1 | hypothetical protein | - |
| FNX50_RS11180 (2293236) | 2293236..2294921 | + | 1686 | WP_000628576.1 | ABC transporter ATP-binding protein/permease | - |
| FNX50_RS11185 (2294959) | 2294959..2297331 | + | 2373 | WP_049284067.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.003 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.003 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.003 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.005 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.006 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.003 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.003 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.003 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.003 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.003 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.003 |