MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 71198 bp
Accession: NZ_CP066272 Location: 1..71198 Organism: Pseudomonas tremae strain PA-1-10F Replicon: plasmid p2
Accession: NZ_CP066272 Location: 1..71198 Organism: Pseudomonas tremae strain PA-1-10F Replicon: plasmid p2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I9H09_RS26460 (I9H09_26320) | 1..1314 | + | 1314 | WP_060412816.1 | replication initiation protein | - |
| I9H09_RS26465 (I9H09_26325) | 1498..1812 | + | 315 | WP_060412817.1 | HU family DNA-binding protein | - |
| I9H09_RS26470 (I9H09_26330) | 2078..3226 | + | 1149 | WP_031598959.1 | XRE family transcriptional regulator | - |
| I9H09_RS26475 (I9H09_26335) | 3213..3692 | + | 480 | WP_031598957.1 | DUF4411 family protein | - |
| I9H09_RS26480 (I9H09_26340) | 3951..4106 | + | 156 | WP_096060180.1 | DUF1508 domain-containing protein | - |
| I9H09_RS26485 (I9H09_26345) | 4396..5085 | - | 690 | Protein_5 | transposase | - |
| I9H09_RS26490 (I9H09_26350) | 5921..6145 | + | 225 | WP_044311068.1 | carbon storage regulator | - |
| I9H09_RS26495 (I9H09_26355) | 6160..7776 | + | 1617 | WP_236502615.1 | glycoside hydrolase family 28 protein | - |
| I9H09_RS26500 (I9H09_26360) | 7841..7930 | + | 90 | WP_231994119.1 | DUF4113 domain-containing protein | - |
| I9H09_RS26505 (I9H09_26365) | 8299..8697 | - | 399 | Protein_9 | transposase | - |
| I9H09_RS26510 (I9H09_26370) | 8882..9370 | - | 489 | WP_024421281.1 | hypothetical protein | - |
| I9H09_RS26515 (I9H09_26375) | 9700..10380 | + | 681 | WP_005730279.1 | AAA family ATPase | - |
| I9H09_RS26520 (I9H09_26380) | 10371..10733 | + | 363 | WP_005730278.1 | hypothetical protein | - |
| I9H09_RS26525 (I9H09_26385) | 11513..12148 | + | 636 | WP_103724617.1 | recombinase family protein | - |
| I9H09_RS26530 (I9H09_26390) | 12241..12519 | + | 279 | WP_003320513.1 | hypothetical protein | - |
| I9H09_RS26535 (I9H09_26395) | 12570..12755 | + | 186 | WP_005730485.1 | hypothetical protein | Antitoxin Detail |
| I9H09_RS26540 (I9H09_26400) | 12745..13017 | + | 273 | WP_003348606.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| I9H09_RS26545 (I9H09_26405) | 13121..13834 | + | 714 | WP_044311048.1 | YecA family protein | - |
| I9H09_RS26550 (I9H09_26410) | 13879..14212 | + | 334 | Protein_18 | transposase | - |
| I9H09_RS26555 (I9H09_26415) | 14652..15206 | + | 555 | WP_031598886.1 | hypothetical protein | - |
| I9H09_RS26560 (I9H09_26420) | 15257..15487 | + | 231 | WP_031598890.1 | carbon storage regulator | - |
| I9H09_RS26565 | 15605..15718 | - | 114 | Protein_21 | resolvase | - |
| I9H09_RS26570 (I9H09_26425) | 16022..16546 | - | 525 | WP_080719055.1 | DUF2778 domain-containing protein | - |
| I9H09_RS26575 (I9H09_26430) | 16570..17070 | - | 501 | WP_236502550.1 | type VI secretion system tube protein Hcp | - |
| I9H09_RS26580 (I9H09_26435) | 17810..18430 | - | 621 | WP_005747119.1 | recombinase family protein | - |
| I9H09_RS26585 (I9H09_26440) | 18898..19230 | + | 333 | WP_005769723.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| I9H09_RS26590 (I9H09_26445) | 19232..19516 | + | 285 | WP_005769722.1 | NadS family protein | - |
| I9H09_RS26595 (I9H09_26450) | 19669..20085 | + | 417 | WP_005769721.1 | TrfB-related DNA-binding protein | - |
| I9H09_RS26600 (I9H09_26455) | 20545..20922 | + | 378 | WP_003344294.1 | hypothetical protein | - |
| I9H09_RS26605 (I9H09_26460) | 20969..21805 | + | 837 | WP_103379609.1 | DUF932 domain-containing protein | - |
| I9H09_RS26610 (I9H09_26465) | 21873..22073 | + | 201 | WP_005769719.1 | hypothetical protein | - |
| I9H09_RS26615 (I9H09_26470) | 22140..22418 | - | 279 | WP_004661031.1 | mobilization protein | - |
| I9H09_RS26620 (I9H09_26475) | 22462..22743 | - | 282 | WP_080268300.1 | hypothetical protein | - |
| I9H09_RS26625 (I9H09_26480) | 22716..23138 | - | 423 | WP_005769717.1 | hypothetical protein | - |
| I9H09_RS26630 (I9H09_26485) | 23320..23649 | + | 330 | WP_122253302.1 | plasmid mobilization protein MobA | - |
| I9H09_RS26635 (I9H09_26490) | 23662..25614 | + | 1953 | WP_005769713.1 | relaxase/mobilization nuclease domain-containing protein | - |
| I9H09_RS26640 | 25666..25974 | - | 309 | Protein_36 | integrase | - |
| I9H09_RS26645 (I9H09_26495) | 26161..26385 | - | 225 | Protein_37 | AAA family ATPase | - |
| I9H09_RS26650 (I9H09_26500) | 26462..28597 | - | 2136 | WP_236502549.1 | XopB/HopD1 family type III secretion system effector | - |
| I9H09_RS26655 (I9H09_26505) | 29167..29790 | - | 624 | WP_005771831.1 | glycoside hydrolase family 25 protein | - |
| I9H09_RS26660 (I9H09_26510) | 30593..31774 | - | 1182 | WP_054080417.1 | glycoside hydrolase family 10 protein | - |
| I9H09_RS26665 (I9H09_26515) | 31859..33154 | - | 1296 | WP_236502595.1 | glycoside hydrolase family 68 protein | - |
| I9H09_RS26670 (I9H09_26520) | 33166..33351 | - | 186 | WP_080268116.1 | Com family DNA-binding transcriptional regulator | - |
| I9H09_RS26675 (I9H09_26525) | 33845..35794 | - | 1950 | WP_236502594.1 | EAL domain-containing protein | - |
| I9H09_RS26680 (I9H09_26530) | 36418..37119 | + | 702 | WP_011107021.1 | FadR/GntR family transcriptional regulator | - |
| I9H09_RS26685 (I9H09_26535) | 37188..38381 | + | 1194 | WP_011107022.1 | L-2-hydroxyglutarate oxidase | - |
| I9H09_RS26690 (I9H09_26540) | 38422..39768 | + | 1347 | WP_024668558.1 | MFS transporter | - |
| I9H09_RS26695 (I9H09_26545) | 39809..39994 | + | 186 | WP_003344336.1 | hypothetical protein | - |
| I9H09_RS26700 (I9H09_26550) | 40016..40399 | - | 384 | WP_003344338.1 | helix-turn-helix transcriptional regulator | - |
| I9H09_RS26705 (I9H09_26555) | 40614..41147 | + | 534 | WP_057416617.1 | transcription termination/antitermination NusG family protein | - |
| I9H09_RS26710 (I9H09_26560) | 41236..41445 | + | 210 | WP_003344343.1 | hypothetical protein | - |
| I9H09_RS26715 (I9H09_26565) | 41738..42229 | + | 492 | WP_003344347.1 | lytic transglycosylase domain-containing protein | - |
| I9H09_RS26720 (I9H09_26570) | 42266..42739 | + | 474 | WP_024670608.1 | DotD/TraH family lipoprotein | - |
| I9H09_RS26725 (I9H09_26575) | 42736..43536 | + | 801 | WP_011106981.1 | type IV secretion system DotC family protein | - |
| I9H09_RS26730 (I9H09_26580) | 43533..44714 | + | 1182 | WP_024670609.1 | plasmid transfer ATPase TraJ | - |
| I9H09_RS26735 (I9H09_26585) | 44912..45496 | + | 585 | WP_005769783.1 | hypothetical protein | - |
| I9H09_RS26740 (I9H09_26590) | 45493..46044 | + | 552 | WP_050586616.1 | phospholipase D family protein | - |
| I9H09_RS26745 (I9H09_26595) | 46081..46326 | + | 246 | WP_024670611.1 | hypothetical protein | - |
| I9H09_RS26750 (I9H09_26600) | 46355..46642 | + | 288 | WP_024670612.1 | IcmT/TraK family protein | - |
| I9H09_RS26755 (I9H09_26605) | 46685..50971 | + | 4287 | WP_236502588.1 | DUF5710 domain-containing protein | - |
| I9H09_RS26760 (I9H09_26610) | 50997..51350 | + | 354 | WP_005622158.1 | conjugal transfer protein | - |
| I9H09_RS26765 (I9H09_26615) | 51347..52054 | + | 708 | WP_011107031.1 | DotI/IcmL family type IV secretion protein | - |
| I9H09_RS26770 (I9H09_26620) | 52111..53169 | + | 1059 | WP_080546526.1 | DotH/IcmK family type IV secretion protein | - |
| I9H09_RS26775 (I9H09_26625) | 53175..54533 | + | 1359 | WP_236502587.1 | conjugal transfer protein TraO | - |
| I9H09_RS26780 (I9H09_26630) | 54530..55240 | + | 711 | WP_236502586.1 | conjugal transfer protein TraP | - |
| I9H09_RS26785 (I9H09_26635) | 55249..55791 | + | 543 | WP_005769767.1 | conjugal transfer protein TraQ | - |
| I9H09_RS26790 (I9H09_26640) | 55867..56262 | + | 396 | WP_005769766.1 | conjugal transfer protein TraR | - |
| I9H09_RS26795 (I9H09_26645) | 56344..56955 | + | 612 | WP_103379627.1 | conjugal transfer protein TraT | - |
| I9H09_RS26800 (I9H09_26650) | 56930..59986 | + | 3057 | WP_248972616.1 | ATP-binding protein | - |
| I9H09_RS26805 (I9H09_26655) | 59997..61211 | + | 1215 | WP_236502564.1 | conjugal transfer protein TraW | - |
| I9H09_RS26810 (I9H09_26660) | 61201..61803 | + | 603 | WP_236502563.1 | conjugal transfer protein TraX | - |
| I9H09_RS26815 (I9H09_26665) | 61834..63978 | + | 2145 | WP_236502562.1 | DotA/TraY family protein | - |
| I9H09_RS26820 (I9H09_26670) | 64082..64327 | + | 246 | WP_003344389.1 | hypothetical protein | - |
| I9H09_RS26825 (I9H09_26675) | 64324..64971 | + | 648 | WP_024670621.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| I9H09_RS26830 (I9H09_26680) | 65064..66266 | + | 1203 | WP_024670622.1 | hypothetical protein | - |
| I9H09_RS26835 (I9H09_26685) | 66256..66633 | - | 378 | WP_031598127.1 | PIN domain-containing protein | - |
| I9H09_RS26840 (I9H09_26690) | 66630..66830 | - | 201 | WP_031598125.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| I9H09_RS26845 (I9H09_26695) | 66923..68008 | + | 1086 | WP_236502561.1 | thioredoxin fold domain-containing protein | - |
| I9H09_RS26850 (I9H09_26700) | 67995..70283 | + | 2289 | WP_236502560.1 | F-type conjugative transfer protein TrbC | - |
| I9H09_RS26855 (I9H09_26705) | 70361..70789 | + | 429 | WP_011107000.1 | GntR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|