MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 78055 bp
Accession: NZ_CP066268 Location: 1..78055 Organism: Pseudomonas tremae strain PA-1-12B Replicon: plasmid p1
Accession: NZ_CP066268 Location: 1..78055 Organism: Pseudomonas tremae strain PA-1-12B Replicon: plasmid p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I9H06_RS26685 (I9H06_26555) | 1..1314 | + | 1314 | WP_122356804.1 | replication initiation protein | - |
| I9H06_RS26690 (I9H06_26560) | 1453..1878 | + | 426 | WP_017279391.1 | S24 family peptidase | - |
| I9H06_RS26695 (I9H06_26565) | 1856..3154 | + | 1299 | WP_248943782.1 | Y-family DNA polymerase | - |
| I9H06_RS26700 (I9H06_26570) | 3963..4496 | - | 534 | WP_122253084.1 | hypothetical protein | - |
| I9H06_RS26705 (I9H06_26575) | 4605..4736 | - | 132 | Protein_4 | helix-turn-helix domain-containing protein | - |
| I9H06_RS26710 | 4905..4961 | + | 57 | WP_231994148.1 | hypothetical protein | - |
| I9H06_RS26715 | 4995..5414 | - | 420 | WP_229687585.1 | hypothetical protein | - |
| I9H06_RS26720 (I9H06_26590) | 5465..6469 | - | 1005 | WP_110768778.1 | ParB/RepB/Spo0J family partition protein | - |
| I9H06_RS26725 (I9H06_26595) | 6570..7697 | - | 1128 | WP_110768779.1 | ParA family protein | - |
| I9H06_RS26730 (I9H06_26600) | 7962..9124 | + | 1163 | WP_122346372.1 | IS3 family transposase ISPsy24 | Transposase |
| I9H06_RS26735 (I9H06_26605) | 9467..9781 | + | 315 | WP_057414346.1 | hypothetical protein | - |
| I9H06_RS26740 (I9H06_26610) | 10035..10493 | + | 459 | WP_122253124.1 | glyoxalase superfamily protein | - |
| I9H06_RS26745 (I9H06_26615) | 10736..10966 | + | 231 | WP_057414339.1 | carbon storage regulator | - |
| I9H06_RS26750 (I9H06_26620) | 10989..11402 | + | 414 | WP_122253122.1 | TraR/DksA family transcriptional regulator | - |
| I9H06_RS26755 (I9H06_26625) | 11562..12242 | + | 681 | WP_122253120.1 | GNAT family N-acetyltransferase | - |
| I9H06_RS26760 (I9H06_26630) | 12615..14645 | - | 2031 | WP_248943783.1 | hypothetical protein | - |
| I9H06_RS26765 (I9H06_26635) | 15573..16133 | + | 561 | WP_005782565.1 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| I9H06_RS26770 (I9H06_26640) | 16138..17775 | + | 1638 | WP_221036040.1 | IS481 family transposase ISAzs36 | Transposase |
| I9H06_RS26775 (I9H06_26645) | 17765..18736 | + | 972 | WP_103391643.1 | AAA family ATPase | - |
| I9H06_RS26780 (I9H06_26650) | 19348..20073 | + | 726 | WP_235662958.1 | hypothetical protein | - |
| I9H06_RS26785 (I9H06_26655) | 20297..21280 | + | 984 | WP_183142466.1 | hypothetical protein | - |
| I9H06_RS26790 (I9H06_26660) | 21298..21951 | - | 654 | WP_055002489.1 | type III effector HopAZ1 | - |
| I9H06_RS26795 (I9H06_26665) | 22781..23401 | - | 621 | WP_005747119.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| I9H06_RS26800 (I9H06_26670) | 23869..24201 | + | 333 | WP_005769723.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| I9H06_RS26805 (I9H06_26675) | 24203..24487 | + | 285 | WP_005769722.1 | NadS family protein | - |
| I9H06_RS26810 (I9H06_26680) | 24640..25056 | + | 417 | WP_005769721.1 | TrfB-related DNA-binding protein | - |
| I9H06_RS26815 (I9H06_26685) | 25516..25893 | + | 378 | WP_003344294.1 | hypothetical protein | - |
| I9H06_RS26820 (I9H06_26690) | 25940..26776 | + | 837 | WP_103379609.1 | DUF932 domain-containing protein | - |
| I9H06_RS26825 (I9H06_26695) | 26844..27044 | + | 201 | WP_005769719.1 | hypothetical protein | - |
| I9H06_RS26830 (I9H06_26700) | 27111..27389 | - | 279 | WP_004661031.1 | mobilization protein | - |
| I9H06_RS26835 (I9H06_26705) | 27433..27714 | - | 282 | WP_080268300.1 | hypothetical protein | - |
| I9H06_RS26840 (I9H06_26710) | 27687..28109 | - | 423 | WP_005769717.1 | hypothetical protein | - |
| I9H06_RS26845 (I9H06_26715) | 28291..28620 | + | 330 | WP_122253302.1 | plasmid mobilization protein MobA | - |
| I9H06_RS26850 (I9H06_26720) | 28633..30585 | + | 1953 | WP_236534700.1 | Protein TraI | Relaxase |
| I9H06_RS26855 | 30637..30945 | - | 309 | Protein_34 | integrase | - |
| I9H06_RS26860 (I9H06_26725) | 31132..31356 | - | 225 | Protein_35 | AAA family ATPase | - |
| I9H06_RS26865 (I9H06_26730) | 31433..33568 | - | 2136 | WP_236502549.1 | XopB/HopD1 family type III secretion system effector | - |
| I9H06_RS26870 (I9H06_26735) | 34138..34761 | - | 624 | WP_005771831.1 | glycoside hydrolase family 25 protein | - |
| I9H06_RS26875 (I9H06_26740) | 35564..36745 | - | 1182 | WP_054080417.1 | glycoside hydrolase family 10 protein | - |
| I9H06_RS26880 (I9H06_26745) | 36830..38125 | - | 1296 | WP_236502595.1 | glycoside hydrolase family 68 protein | - |
| I9H06_RS26885 (I9H06_26750) | 38137..38322 | - | 186 | WP_080268116.1 | Com family DNA-binding transcriptional regulator | - |
| I9H06_RS26890 (I9H06_26755) | 38816..40765 | - | 1950 | WP_011107020.1 | putative signaling protein | VF |
| I9H06_RS26895 (I9H06_26760) | 41391..42092 | + | 702 | WP_011107021.1 | FadR/GntR family transcriptional regulator | - |
| I9H06_RS26900 (I9H06_26765) | 42161..43354 | + | 1194 | WP_011107022.1 | L-2-hydroxyglutarate oxidase | - |
| I9H06_RS26905 (I9H06_26770) | 43395..44741 | + | 1347 | WP_024668558.1 | MFS transporter | - |
| I9H06_RS26910 (I9H06_26775) | 44782..44967 | + | 186 | WP_003344336.1 | hypothetical protein | - |
| I9H06_RS26915 (I9H06_26780) | 44989..45372 | - | 384 | WP_003344338.1 | helix-turn-helix transcriptional regulator | - |
| I9H06_RS26920 (I9H06_26785) | 45587..46120 | + | 534 | WP_236534701.1 | transcription termination/antitermination NusG family protein | - |
| I9H06_RS26925 (I9H06_26790) | 46209..46418 | + | 210 | WP_003344343.1 | hypothetical protein | - |
| I9H06_RS26930 (I9H06_26795) | 46711..47202 | + | 492 | WP_003344347.1 | hypothetical protein | VF |
| I9H06_RS26935 (I9H06_26800) | 47239..47712 | + | 474 | WP_024670608.1 | DotD/TraH family lipoprotein | - |
| I9H06_RS26940 (I9H06_26805) | 47709..48509 | + | 801 | WP_011106981.1 | hypothetical protein | VF |
| I9H06_RS26945 (I9H06_26810) | 48506..49687 | + | 1182 | WP_024670609.1 | Twitching mobility protein | VF |
| I9H06_RS26950 (I9H06_26815) | 50076..50468 | + | 393 | WP_236534702.1 | hypothetical protein | - |
| I9H06_RS26955 (I9H06_26820) | 50465..51016 | + | 552 | WP_050586616.1 | Phospholipase D | VF |
| I9H06_RS26960 (I9H06_26825) | 51053..51298 | + | 246 | WP_024670611.1 | hypothetical protein | - |
| I9H06_RS26965 (I9H06_26830) | 51327..51614 | + | 288 | WP_024670612.1 | IcmT/TraK family protein | - |
| I9H06_RS26970 (I9H06_26835) | 51657..56111 | + | 4455 | WP_236534703.1 | DUF5710 domain-containing protein | - |
| I9H06_RS26975 (I9H06_26840) | 56137..56490 | + | 354 | WP_005622158.1 | conjugal transfer protein | - |
| I9H06_RS26980 (I9H06_26845) | 56652..57194 | + | 543 | Protein_59 | DotI/IcmL/TraM family protein | - |
| I9H06_RS26985 (I9H06_26850) | 57251..58309 | + | 1059 | WP_236534704.1 | hypothetical protein | VF |
| I9H06_RS26990 (I9H06_26855) | 58315..59673 | + | 1359 | WP_122323550.1 | hypothetical protein | VF |
| I9H06_RS26995 (I9H06_26860) | 59670..60380 | + | 711 | WP_005769769.1 | conjugal transfer protein TraP | - |
| I9H06_RS27000 (I9H06_26865) | 60389..60931 | + | 543 | WP_005769767.1 | conjugal transfer protein TraQ | - |
| I9H06_RS27005 (I9H06_26870) | 61007..61402 | + | 396 | WP_005769766.1 | conjugal transfer protein TraR | - |
| I9H06_RS27010 (I9H06_26875) | 61484..62095 | + | 612 | WP_103379627.1 | conjugal transfer protein TraT | - |
| I9H06_RS27015 (I9H06_26880) | 62070..65126 | + | 3057 | WP_122323549.1 | ATP-binding protein | - |
| I9H06_RS27020 (I9H06_26885) | 65150..65386 | + | 237 | WP_007247241.1 | hypothetical protein | - |
| I9H06_RS27025 (I9H06_26890) | 65429..66643 | + | 1215 | WP_122347648.1 | conjugal transfer protein TraW | - |
| I9H06_RS27030 (I9H06_26895) | 66633..67235 | + | 603 | WP_122323548.1 | conjugal transfer protein TraX | - |
| I9H06_RS27035 (I9H06_26900) | 67326..69410 | + | 2085 | WP_248943784.1 | DotA/TraY family protein | - |
| I9H06_RS27040 (I9H06_26905) | 69513..69758 | + | 246 | WP_003344389.1 | hypothetical protein | - |
| I9H06_RS27045 (I9H06_26910) | 69755..70399 | + | 645 | WP_005769751.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| I9H06_RS27050 (I9H06_26915) | 70492..71694 | + | 1203 | WP_236534705.1 | conjugal transfer protein | - |
| I9H06_RS27055 (I9H06_26920) | 71684..72061 | - | 378 | WP_003344395.1 | PIN domain-containing protein | Toxin Detail |
| I9H06_RS27060 (I9H06_26925) | 72058..72258 | - | 201 | WP_004644067.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| I9H06_RS27065 (I9H06_26930) | 72350..73435 | + | 1086 | WP_122324283.1 | thioredoxin fold domain-containing protein | - |
| I9H06_RS27070 (I9H06_26935) | 73422..75710 | + | 2289 | WP_057429711.1 | F-type conjugative transfer protein TrbC | - |
| I9H06_RS27075 (I9H06_26940) | 75738..76160 | + | 423 | WP_248943781.1 | hypothetical protein | - |
| I9H06_RS27080 (I9H06_26945) | 76181..76744 | + | 564 | WP_099264719.1 | hypothetical protein | - |
| I9H06_RS27085 (I9H06_26950) | 76932..77360 | + | 429 | Protein_80 | GntR family transcriptional regulator | - |
| I9H06_RS27090 (I9H06_26955) | 77430..77657 | + | 228 | WP_122253139.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|