MGE detailed information
MGE type: Conjugative plasmid MGE length: 73470 bp
Accession: NZ_CP065667 Location: 1..73470 Organism: Delftia acidovorans strain FDAARGOS_909 Replicon: plasmid unnamed
Accession: NZ_CP065667 Location: 1..73470 Organism: Delftia acidovorans strain FDAARGOS_909 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6G66_RS00010 () | 175..615 | + | 441 | WP_011304099.1 | conjugal transfer protein TraM | - |
| I6G66_RS00015 () | 811..1449 | - | 639 | WP_011798728.1 | hypothetical protein | - |
| I6G66_RS00020 () | 1479..1826 | - | 348 | WP_011798727.1 | hypothetical protein | - |
| I6G66_RS00025 () | 1997..3004 | - | 1008 | WP_011798726.1 | DNA-binding protein | - |
| I6G66_RS00030 () | 3206..4273 | - | 1068 | WP_088138644.1 | ParB/RepB/Spo0J family partition protein | - |
| I6G66_RS00035 () | 4270..5034 | - | 765 | WP_041836471.1 | ParA family protein | - |
| I6G66_RS00040 () | 5031..5339 | - | 309 | WP_041836477.1 | transcriptional regulator KorA | - |
| I6G66_RS00045 () | 5446..5775 | - | 330 | WP_011798723.1 | DUF2761 domain-containing protein | - |
| I6G66_RS00050 () | 5778..6104 | - | 327 | WP_011798722.1 | hypothetical protein | - |
| I6G66_RS00055 () | 6313..6549 | - | 237 | WP_011255200.1 | stable inheritance protein KleA | - |
| I6G66_RS00060 () | 6706..6963 | - | 258 | WP_011798721.1 | hypothetical protein | - |
| I6G66_RS00065 () | 6980..8182 | - | 1203 | WP_011798720.1 | hypothetical protein | - |
| I6G66_RS00070 () | 8194..8457 | - | 264 | WP_041836470.1 | hypothetical protein | - |
| I6G66_RS00075 () | 8457..8888 | - | 432 | WP_011304111.1 | antirestriction protein | - |
| I6G66_RS00080 () | 9059..9322 | + | 264 | WP_011114070.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| I6G66_RS00085 () | 9309..9590 | + | 282 | WP_011798718.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| I6G66_RS00090 () | 10652..12217 | - | 1566 | Protein_17 | Tn3 family transposase TnpA_IS1071 | Transposase |
| I6G66_RS00095 () | 12263..13276 | - | 1014 | Protein_18 | Tn3 family transposase TnpA_IS1071 | Transposase |
| I6G66_RS00100 () | 13273..14052 | - | 780 | WP_197953180.1 | Gluconate 5-dehydrogenase | VF |
| I6G66_RS00105 () | 14073..15395 | - | 1323 | WP_197953182.1 | histidinol dehydrogenase | - |
| I6G66_RS00110 () | 15684..16445 | + | 762 | Protein_21 | IS3 family transposase | - |
| I6G66_RS00115 () | 16942..17745 | - | 804 | WP_197953184.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| I6G66_RS00120 () | 18977..19570 | + | 594 | WP_197953222.1 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | VF |
| I6G66_RS00125 () | 19599..20561 | + | 963 | WP_034114050.1 | PDR/VanB family oxidoreductase | - |
| I6G66_RS00130 () | 20619..21089 | + | 471 | WP_034114049.1 | flavin reductase | - |
| I6G66_RS00135 () | 21086..22081 | + | 996 | WP_032029056.1 | 2-dehydropantoate 2-reductase | - |
| I6G66_RS00140 () | 22130..23068 | - | 939 | WP_197953204.1 | glutathione S-transferase family protein | - |
| I6G66_RS00145 () | 23116..23271 | - | 156 | WP_197953206.1 | hypothetical protein | - |
| I6G66_RS00150 () | 23552..26467 | - | 2916 | WP_003049965.1 | Tn3 family transposase TnpA_IS1071 | Transposase |
| I6G66_RS00155 () | 26691..26972 | - | 282 | Protein_30 | IS21 family transposase ISVapa4 | Transposase |
| I6G66_RS00160 () | 27487..28215 | - | 729 | WP_031942805.1 | class I SAM-dependent methyltransferase | - |
| I6G66_RS00165 () | 28916..29707 | - | 792 | WP_197953208.1 | phosphodiesterase | - |
| I6G66_RS00170 () | 29723..30985 | - | 1263 | WP_197953210.1 | ABC transporter substrate-binding protein | - |
| I6G66_RS00175 () | 31004..31837 | - | 834 | WP_197953218.1 | carbohydrate ABC transporter permease | - |
| I6G66_RS00180 () | 31834..32706 | - | 873 | WP_197953220.1 | sugar ABC transporter permease | - |
| I6G66_RS00185 () | 32716..33858 | - | 1143 | WP_092701466.1 | Trehalose import ATP-binding protein SugC | VF |
| I6G66_RS00190 () | 33851..34564 | - | 714 | WP_159433803.1 | HAD-IA family hydrolase | - |
| I6G66_RS00195 () | 34681..34815 | + | 135 | Protein_38 | DeoR family transcriptional regulator | - |
| I6G66_RS00200 () | 34904..36430 | + | 1527 | WP_032491591.1 | IS21 family transposase ISAlsp1 | Transposase |
| I6G66_RS00205 () | 36420..37223 | + | 804 | WP_088138647.1 | IS21 family transposase ISAisp7 | Transposase |
| I6G66_RS00210 () | 37297..37641 | + | 345 | Protein_41 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| I6G66_RS00215 () | 37832..39055 | - | 1224 | WP_088138646.1 | replication initiator protein A | - |
| I6G66_RS00220 () | 39103..39441 | - | 339 | WP_011798708.1 | single-stranded DNA-binding protein | - |
| I6G66_RS00225 () | 39550..39912 | + | 363 | WP_000283041.1 | transcriptional regulator | - |
| I6G66_RS00230 () | 40223..41188 | + | 966 | WP_011798707.1 | Putative conjugal transfer protein | VF |
| I6G66_RS00235 () | 41201..41665 | + | 465 | WP_011222079.1 | conjugal transfer system pilin TrbC | - |
| I6G66_RS00240 () | 41669..41980 | + | 312 | WP_001207961.1 | conjugal transfer protein TrbD | - |
| I6G66_RS00245 () | 41977..44535 | + | 2559 | WP_011798706.1 | VirB4 family type IV secretion/conjugal transfer ATPase | - |
| I6G66_RS00250 () | 44532..45314 | + | 783 | WP_011798705.1 | conjugal transfer protein TrbF | - |
| I6G66_RS00255 () | 45332..46231 | + | 900 | WP_000753228.1 | P-type conjugative transfer protein TrbG | - |
| I6G66_RS00260 () | 46234..46722 | + | 489 | WP_011798704.1 | conjugal transfer protein TrbH | - |
| I6G66_RS00265 () | 46727..48145 | + | 1419 | WP_011798703.1 | Type IV secretion system protein virB10 | VF |
| I6G66_RS00270 () | 48163..48927 | + | 765 | WP_011798702.1 | P-type conjugative transfer protein TrbJ | - |
| I6G66_RS00275 () | 48937..49164 | + | 228 | WP_011798701.1 | entry exclusion lipoprotein TrbK | - |
| I6G66_RS00280 () | 49175..50908 | + | 1734 | WP_011798700.1 | P-type conjugative transfer protein TrbL | - |
| I6G66_RS00285 () | 50925..51509 | + | 585 | WP_011798699.1 | conjugal transfer protein TrbM | - |
| I6G66_RS00290 () | 51523..52158 | + | 636 | WP_011798698.1 | hypothetical protein | VF |
| I6G66_RS00295 () | 52187..52453 | + | 267 | WP_011798697.1 | hypothetical protein | - |
| I6G66_RS00300 () | 52453..53151 | + | 699 | WP_011798696.1 | conjugal transfer protein TraX | - |
| I6G66_RS00305 () | 53167..53598 | + | 432 | WP_001665065.1 | Type IV secretion system putative outer membrane lipoprotein/BS1330_II0058 | VF |
| I6G66_RS00310 () | 53754..54428 | + | 675 | WP_011798695.1 | DNA methylase | - |
| I6G66_RS00315 () | 54507..55037 | + | 531 | WP_011798694.1 | hypothetical protein | - |
| I6G66_RS00320 () | 54973..55170 | - | 198 | WP_197953238.1 | helix-turn-helix domain-containing protein | - |
| I6G66_RS00325 () | 55206..55439 | + | 234 | WP_011798693.1 | hypothetical protein | - |
| I6G66_RS00330 () | 55503..55709 | - | 207 | WP_011798692.1 | hypothetical protein | - |
| I6G66_RS00335 () | 55706..55879 | - | 174 | WP_172734609.1 | hypothetical protein | - |
| I6G66_RS00340 () | 55876..56739 | - | 864 | WP_011798691.1 | NgoMIV family type II restriction endonuclease | - |
| I6G66_RS00345 () | 56739..57695 | - | 957 | WP_011798690.1 | DNA cytosine methyltransferase | - |
| I6G66_RS00350 () | 57692..57910 | - | 219 | WP_011798689.1 | hypothetical protein | - |
| I6G66_RS00355 () | 58053..58301 | + | 249 | WP_012585400.1 | type II toxin-antitoxin system YafQ family toxin | - |
| I6G66_RS00360 () | 58428..59003 | + | 576 | WP_001173919.1 | Tn3 family transposase ISPsy42 | Transposase |
| I6G66_RS00365 () | 59301..64043 | - | 4743 | WP_011798687.1 | DUF1738 domain-containing protein | - |
| I6G66_RS00370 () | 64047..64439 | - | 393 | WP_011798735.1 | hypothetical protein | - |
| I6G66_RS00375 () | 64464..66527 | - | 2064 | WP_088138645.1 | DNA topoisomerase III | - |
| I6G66_RS00380 () | 66542..67078 | - | 537 | WP_011304092.1 | conjugative transfer signal peptidase TraF | - |
| I6G66_RS00385 () | 67075..68979 | - | 1905 | WP_011798733.1 | Conjugal transfer protein TraG | VF |
| I6G66_RS00390 () | 68976..69251 | - | 276 | WP_011798732.1 | entry exclusion lipoprotein TrbK | - |
| I6G66_RS00395 () | 69248..71506 | - | 2259 | WP_011798731.1 | Protein TraI | Relaxase |
| I6G66_RS00400 () | 71541..71912 | - | 372 | WP_011013290.1 | conjugal transfer transcriptional regulator TraJ | - |
| I6G66_RS00405 () | 71917..72138 | - | 222 | WP_011798730.1 | hypothetical protein | - |
| I6G66_RS00410 () | 72501..72920 | + | 420 | WP_011798729.1 | TraK family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|