MGE detailed information
MGE type: Prophage MGE length: 120792 bp
Accession: NZ_CP065615 Location: 753575..874366 Organism: Escherichia coli strain FDAARGOS_943 Replicon: chromosome
Accession: NZ_CP065615 Location: 753575..874366 Organism: Escherichia coli strain FDAARGOS_943 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6H00_RS03875 () | 750623..751594 | - | 972 | WP_069913054.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| I6H00_RS03880 () | 751591..752334 | - | 744 | WP_000019590.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| I6H00_RS03885 () | 752375..752770 | - | 396 | WP_000252980.1 | MAPEG family protein | - |
| I6H00_RS03890 () | 752823..753593 | - | 771 | WP_046880181.1 | DUF72 domain-containing protein | - |
| I6H00_RS03895 () | 753575..754888 | - | 1314 | WP_000362002.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| I6H00_RS03900 () | 754944..755183 | - | 240 | WP_197939907.1 | excisionase family protein | - |
| I6H00_RS03905 () | 755199..756355 | + | 1157 | WP_197933473.1 | IS3 family transposase IS600 | Transposase |
| I6H00_RS03910 () | 756398..756646 | + | 249 | Protein_768 | replication protein | - |
| I6H00_RS03915 () | 756739..757967 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| I6H00_RS03920 () | 758106..758549 | + | 444 | Protein_770 | DNA-binding protein | - |
| I6H00_RS03925 () | 758560..758874 | + | 315 | Protein_771 | AAA family ATPase | - |
| I6H00_RS03930 () | 758896..759606 | - | 711 | Protein_772 | IS4 family transposase ISEc60 | Transposase |
| I6H00_RS03940 () | 760868..761353 | - | 486 | Protein_774 | IS4 family transposase ISEc60 | Transposase |
| I6H00_RS03945 () | 761437..761691 | + | 255 | Protein_775 | IS21 family transposase ISGur15 | Transposase |
| I6H00_RS03950 () | 761897..762100 | + | 204 | WP_000917724.1 | hypothetical protein | - |
| I6H00_RS03955 () | 762251..763309 | + | 1059 | WP_038348369.1 | site-specific DNA-methyltransferase | - |
| I6H00_RS03980 () | 764341..764556 | + | 216 | WP_000284485.1 | class II holin family protein | - |
| I6H00_RS03985 () | 764561..765091 | + | 531 | WP_000193253.1 | YdfR family protein | - |
| I6H00_RS03990 () | 765413..765946 | + | 534 | Protein_780 | lysozyme | - |
| I6H00_RS03995 () | 765943..766410 | + | 468 | WP_001300775.1 | lysis protein | - |
| I6H00_RS04000 () | 766452..766763 | + | 312 | WP_000708309.1 | DUF4406 domain-containing protein | - |
| I6H00_RS04005 () | 767045..767904 | + | 860 | Protein_783 | hypothetical protein | - |
| I6H00_RS04010 () | 768028..768477 | + | 450 | WP_001542481.1 | hypothetical protein | - |
| I6H00_RS04015 () | 768559..768735 | - | 177 | WP_001205133.1 | hypothetical protein | - |
| I6H00_RS04020 () | 769132..769641 | + | 510 | WP_074132335.1 | terminase small subunit | - |
| I6H00_RS04025 () | 769613..771541 | + | 1929 | WP_197939908.1 | phage terminase large subunit family protein | - |
| I6H00_RS04030 () | 771525..771728 | + | 204 | WP_000259004.1 | head-tail joining protein | - |
| I6H00_RS04035 () | 771725..773317 | + | 1593 | WP_197939909.1 | phage portal protein | - |
| I6H00_RS04040 () | 773307..774812 | + | 1506 | WP_197939910.1 | S49 family peptidase | - |
| I6H00_RS04045 () | 774847..775194 | + | 348 | WP_000256829.1 | head decoration protein | - |
| I6H00_RS04050 () | 775252..776280 | + | 1029 | WP_000522636.1 | major capsid protein | - |
| I6H00_RS04055 () | 776332..776718 | + | 387 | WP_000201488.1 | DNA-packaging protein FI | - |
| I6H00_RS04060 () | 776730..777082 | + | 353 | Protein_794 | phage tail protein | - |
| I6H00_RS04065 () | 777079..778269 | - | 1191 | WP_001111632.1 | IS4 family transposase ISEc60 | Transposase |
| I6H00_RS04070 () | 778397..778981 | + | 585 | WP_000677137.1 | phage tail protein | - |
| I6H00_RS04075 () | 778978..779379 | + | 402 | WP_001343948.1 | phage minor tail U family protein | - |
| I6H00_RS04080 () | 779390..779935 | + | 546 | Protein_798 | phage tail protein | - |
| I6H00_RS04085 () | 779953..780650 | - | 698 | Protein_799 | IS1 family transposase IS1S | Transposase |
| I6H00_RS04090 () | 780707..780907 | + | 201 | Protein_800 | Ig-like domain-containing protein | - |
| I6H00_RS04095 () | 780966..781352 | + | 387 | WP_000478927.1 | phage minor tail protein G | - |
| I6H00_RS04100 () | 781361..781690 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| I6H00_RS04105 () | 781662..784703 | + | 3042 | WP_197939855.1 | phage tail tape measure protein | - |
| I6H00_RS04110 () | 784703..785032 | + | 330 | WP_000447385.1 | phage tail protein | - |
| I6H00_RS04115 () | 785032..785730 | + | 699 | WP_001152598.1 | phage minor tail protein L | - |
| I6H00_RS04120 () | 785735..786478 | + | 744 | WP_000194736.1 | C40 family peptidase | - |
| I6H00_RS04125 () | 786415..787017 | + | 603 | WP_000090878.1 | tail assembly protein | - |
| I6H00_RS04130 () | 787078..790557 | + | 3480 | WP_197939856.1 | host specificity protein J | - |
| I6H00_RS04135 () | 790625..791224 | + | 600 | WP_197939857.1 | Cytidylate kinase | VF |
| I6H00_RS04140 () | 791288..792700 | + | 1413 | WP_197939858.1 | prophage tail fiber N-terminal domain-containing protein | - |
| I6H00_RS04145 () | 792651..793274 | + | 624 | WP_197939859.1 | DUF4376 domain-containing protein | - |
| I6H00_RS04150 () | 793274..793453 | + | 180 | WP_001039895.1 | hypothetical protein | - |
| I6H00_RS04155 () | 793454..795205 | - | 1752 | WP_197939911.1 | Outer membrane protein PagN | VF |
| I6H00_RS04160 () | 795806..796054 | - | 249 | WP_001217553.1 | DinI-like family protein | - |
| I6H00_RS04165 () | 796409..796975 | - | 567 | WP_000891620.1 | hydrolase | - |
| I6H00_RS04170 () | 797285..799057 | + | 1773 | WP_001258662.1 | aspartate--tRNA ligase | - |
| I6H00_RS04175 () | 799175..799627 | + | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| I6H00_RS04180 () | 799656..800396 | + | 741 | WP_000907234.1 | transcriptional regulatory protein YebC | VF |
| I6H00_RS04185 () | 800431..800952 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| I6H00_RS04190 () | 800954..801544 | - | 591 | WP_197940117.1 | YebB family permuted papain-like enzyme | - |
| I6H00_RS04195 () | 801577..802274 | + | 698 | Protein_821 | IS1 family transposase IS1X2 | Transposase |
| I6H00_RS04200 () | 802403..802468 | + | 66 | WP_010723105.1 | stress response small protein YobI | - |
| I6H00_RS04205 () | 802607..803218 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| I6H00_RS04210 () | 803227..804237 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| I6H00_RS04215 () | 804386..805171 | - | 786 | WP_038340274.1 | EtfAB:quinone oxidoreductase | VF |
| I6H00_RS04220 () | 805168..805923 | - | 756 | WP_000202996.1 | Sensor protein ZraS | VF |
| I6H00_RS04225 () | 806002..806934 | + | 933 | WP_038340281.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| I6H00_RS04230 () | 806950..808272 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| I6H00_RS04235 () | 808392..809363 | + | 972 | WP_000448381.1 | NADP-dependent malic enzyme | VF |
| I6H00_RS04240 () | 809494..810936 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| I6H00_RS04245 () | 811064..811933 | - | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| I6H00_RS04250 () | 812271..813746 | + | 1476 | WP_000301720.1 | glucose-6-phosphate dehydrogenase | - |
| I6H00_RS04255 () | 813981..815792 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| I6H00_RS04260 () | 815829..816470 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| I6H00_RS04265 () | 816526..817704 | - | 1179 | WP_000173474.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| I6H00_RS04270 () | 817838..818164 | + | 327 | WP_197939912.1 | YebG family protein | - |
| I6H00_RS04275 () | 818231..818587 | + | 357 | WP_001295500.1 | protein YebF | - |
| I6H00_RS04280 () | 818912..819571 | + | 660 | WP_001590234.1 | tellurite resistance TerB family protein | - |
| I6H00_RS04285 () | 819780..821840 | + | 2061 | WP_000936915.1 | oligopeptidase B | - |
| I6H00_RS04290 () | 821837..822499 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| I6H00_RS04295 () | 822523..823179 | - | 657 | WP_000011660.1 | carbon-nitrogen hydrolase family protein | - |
| I6H00_RS04300 () | 823281..823511 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| I6H00_RS04305 () | 823650..824024 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| I6H00_RS04310 () | 824028..824900 | + | 873 | WP_197939913.1 | copper homeostasis membrane protein CopD | - |
| I6H00_RS04315 () | 824913..825254 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - () | 825282..825516 | - | 235 | - | - | Antitoxin Detail |
| - () | 825412..825515 | + | 104 | - | - | Toxin Detail |
| I6H00_RS04320 () | 825647..826723 | - | 1077 | WP_197939914.1 | hypothetical protein ; Integrase | Integrase |
| I6H00_RS04325 () | 826689..826970 | - | 282 | WP_005127484.1 | excisionase | - |
| I6H00_RS04330 () | 827077..827265 | - | 189 | WP_000276808.1 | DUF1187 family protein | - |
| - () | 827081..827259 | + | 179 | NuclAT_0 | - | - |
| - () | 827081..827259 | + | 179 | NuclAT_0 | - | - |
| - () | 827081..827259 | + | 179 | NuclAT_0 | - | - |
| - () | 827081..827259 | + | 179 | NuclAT_0 | - | - |
| I6H00_RS04335 () | 827316..828413 | - | 1098 | WP_001173292.1 | AAA family ATPase | - |
| I6H00_RS04340 () | 828419..828715 | - | 297 | WP_001277359.1 | host-nuclease inhibitor protein Gam | - |
| I6H00_RS04345 () | 828693..830633 | - | 1941 | WP_073849953.1 | exodeoxyribonuclease VIII | - |
| I6H00_RS04350 () | 830657..830953 | - | 297 | WP_000022244.1 | hypothetical protein | - |
| I6H00_RS04355 () | 831028..831309 | - | 282 | WP_001068998.1 | hypothetical protein | - |
| I6H00_RS04360 () | 831326..832177 | - | 852 | WP_000935604.1 | Rha family phage regulatory protein | - |
| I6H00_RS04365 () | 832611..832766 | - | 156 | WP_000379560.1 | DUF1391 family protein | - |
| I6H00_RS04370 () | 832934..833323 | - | 390 | WP_000367558.1 | helix-turn-helix domain-containing protein | - |
| I6H00_RS04375 () | 833428..833703 | + | 276 | WP_024259867.1 | helix-turn-helix domain-containing protein | - |
| I6H00_RS04380 () | 833687..834109 | + | 423 | WP_046881274.1 | hypothetical protein | - |
| I6H00_RS04385 () | 834200..834679 | + | 480 | Protein_859 | helix-turn-helix domain-containing protein | - |
| I6H00_RS04390 () | 834945..836348 | + | 1404 | WP_052993714.1 | AAA family ATPase | - |
| I6H00_RS04395 () | 836515..837276 | + | 762 | WP_000450677.1 | DUF1627 domain-containing protein | - |
| I6H00_RS04400 () | 837292..837684 | + | 393 | WP_001141102.1 | DUF977 family protein | - |
| I6H00_RS04405 () | 837742..838098 | + | 357 | WP_000403784.1 | hypothetical protein | - |
| I6H00_RS04410 () | 838192..838374 | + | 183 | WP_001224671.1 | hypothetical protein | - |
| I6H00_RS04415 () | 838367..838516 | + | 150 | WP_001343836.1 | hypothetical protein | - |
| I6H00_RS04420 () | 838532..838862 | + | 331 | Protein_866 | hypothetical protein | - |
| I6H00_RS04425 () | 839512..839667 | + | 156 | WP_197939915.1 | type I toxin-antitoxin system Hok family toxin | - |
| I6H00_RS04430 () | 839916..840122 | + | 207 | WP_000050565.1 | hypothetical protein | - |
| I6H00_RS04435 () | 840125..840943 | + | 819 | WP_001094287.1 | hypothetical protein | - |
| I6H00_RS04440 () | 841116..841283 | + | 168 | WP_001101065.1 | hypothetical protein | - |
| I6H00_RS04445 () | 841344..841943 | + | 600 | WP_000233476.1 | DUF1367 family protein | - |
| I6H00_RS04450 () | 841943..842233 | + | 291 | WP_000228038.1 | DUF1364 domain-containing protein | - |
| I6H00_RS04455 () | 842230..842784 | + | 555 | WP_000640137.1 | DUF1133 family protein | - |
| I6H00_RS04480 () | 843576..843791 | + | 216 | WP_000839570.1 | class II holin family protein | - |
| I6H00_RS04485 () | 843791..843946 | + | 156 | WP_197939916.1 | lysozyme | - |
| I6H00_RS04495 () | 845166..845555 | + | 390 | Protein_877 | lysozyme RrrD | - |
| I6H00_RS04500 () | 845552..846019 | + | 468 | WP_000092305.1 | lysis protein | - |
| I6H00_RS04505 () | 846223..846819 | + | 597 | WP_004996416.1 | hypothetical protein | - |
| I6H00_RS04510 () | 847152..847706 | + | 555 | WP_046880358.1 | terminase small subunit | - |
| I6H00_RS04515 () | 847709..849328 | + | 1620 | WP_001130785.1 | hypothetical protein | - |
| I6H00_RS04520 () | 849328..850869 | + | 1542 | WP_046880355.1 | DUF1073 domain-containing protein | - |
| I6H00_RS04525 () | 850910..851599 | + | 690 | WP_000552019.1 | minor capsid protein | - |
| I6H00_RS04530 () | 851596..852945 | + | 1350 | WP_000587356.1 | DUF2213 domain-containing protein | - |
| I6H00_RS04535 () | 852947..853429 | + | 483 | WP_001091400.1 | hypothetical protein | - |
| I6H00_RS04540 () | 853429..854457 | + | 1029 | WP_001031907.1 | hypothetical protein | - |
| I6H00_RS04545 () | 854461..854808 | + | 348 | WP_000829563.1 | hypothetical protein | - |
| I6H00_RS04550 () | 854814..855272 | + | 459 | WP_000537608.1 | DUF4054 domain-containing protein | - |
| I6H00_RS04555 () | 855262..855846 | + | 585 | WP_000247611.1 | hypothetical protein | - |
| I6H00_RS04560 () | 855843..856208 | + | 366 | WP_001009073.1 | hypothetical protein | - |
| I6H00_RS04565 () | 856193..856738 | + | 546 | WP_001139094.1 | hypothetical protein | - |
| I6H00_RS04570 () | 856719..858203 | + | 1485 | WP_001122282.1 | DUF3383 domain-containing protein | - |
| I6H00_RS04575 () | 858204..858650 | + | 447 | WP_000016415.1 | hypothetical protein | - |
| I6H00_RS04580 () | 858650..859054 | + | 405 | WP_000101350.1 | hypothetical protein | - |
| I6H00_RS04585 () | 859096..859278 | + | 183 | WP_000228829.1 | hypothetical protein | - |
| I6H00_RS04590 () | 859262..861283 | + | 2022 | WP_197939917.1 | lytic transglycosylase domain-containing protein | - |
| I6H00_RS04595 () | 861280..861990 | + | 711 | WP_046880346.1 | hypothetical protein | - |
| I6H00_RS04600 () | 861990..862292 | + | 303 | WP_000890114.1 | hypothetical protein | - |
| I6H00_RS04605 () | 862289..863158 | + | 870 | WP_000122180.1 | hypothetical protein | - |
| I6H00_RS04610 () | 863139..863816 | + | 678 | WP_000068497.1 | oxidoreductase | - |
| I6H00_RS04615 () | 863829..864185 | + | 357 | WP_001191863.1 | hypothetical protein | - |
| I6H00_RS04620 () | 864182..865423 | + | 1242 | WP_197939918.1 | baseplate J/gp47 family protein | - |
| I6H00_RS04625 () | 865425..866030 | + | 606 | WP_077137792.1 | DUF2612 domain-containing protein | - |
| I6H00_RS04630 () | 866017..867249 | + | 1233 | WP_096854488.1 | phage tail protein | - |
| I6H00_RS04635 () | 867252..867797 | + | 546 | WP_197939766.1 | tail fiber assembly protein | - |
| I6H00_RS04640 () | 867784..867996 | + | 213 | Protein_906 | carboxypeptidase regulatory-like domain-containing protein | - |
| I6H00_RS04645 () | 868009..868706 | - | 698 | Protein_907 | IS1 family transposase IS1S | Transposase |
| I6H00_RS04650 () | 868767..869966 | + | 1200 | WP_197940118.1 | prophage tail fiber N-terminal domain-containing protein | - |
| I6H00_RS04655 () | 869917..870540 | + | 624 | WP_134889552.1 | DUF4376 domain-containing protein | - |
| I6H00_RS04660 () | 870540..870719 | + | 180 | WP_001039895.1 | hypothetical protein | - |
| I6H00_RS04665 () | 870720..872426 | - | 1707 | WP_197939919.1 | hypothetical protein | VF |
| I6H00_RS04670 () | 873177..873833 | + | 657 | WP_000812733.1 | protein-serine/threonine phosphatase | - |
| I6H00_RS04675 () | 873834..874025 | - | 192 | WP_001338167.1 | YebW family protein | - |
| I6H00_RS04680 () | 874130..874366 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| I6H00_RS04685 () | 874484..875923 | - | 1440 | WP_024194818.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| I6H00_RS04690 () | 876003..878636 | - | 2634 | WP_197939920.1 | PqiB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|