MGE detailed information
MGE type: Prophage MGE length: 36151 bp
Accession: NZ_CP065534 Location: 2810710..2846860 Organism: Lonsdalea populi strain N-5-1 Replicon: chromosome
Accession: NZ_CP065534 Location: 2810710..2846860 Organism: Lonsdalea populi strain N-5-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6N93_RS12270 () | 2806445..2807854 | + | 1410 | WP_085689529.1 | polynucleotide adenylyltransferase PcnB | - |
| I6N93_RS12275 () | 2807854..2808348 | + | 495 | WP_085689531.1 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | - |
| I6N93_RS12280 () | 2808439..2809233 | + | 795 | WP_085689533.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | - |
| I6N93_RS12285 () | 2809249..2810103 | + | 855 | WP_085689535.1 | pantoate--beta-alanine ligase | - |
| I6N93_RS12290 () | 2810124..2810504 | + | 381 | WP_085689537.1 | aspartate 1-decarboxylase | - |
| I6N93_RS12295 () | 2810710..2811480 | - | 771 | WP_085689539.1 | ABC transporter permease | - |
| I6N93_RS12300 () | 2811477..2812415 | - | 939 | WP_085689541.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| I6N93_RS12305 () | 2812528..2813187 | + | 660 | WP_085689543.1 | carbonate dehydratase | - |
| I6N93_RS12310 () | 2813265..2813795 | - | 531 | WP_085689548.1 | hypoxanthine phosphoribosyltransferase | - |
| I6N93_RS12315 () | 2814129..2814485 | + | 357 | WP_085689545.1 | hypothetical protein | - |
| I6N93_RS12320 () | 2814525..2814740 | + | 216 | WP_197669155.1 | hypothetical protein | - |
| I6N93_RS12325 () | 2814842..2816179 | - | 1338 | WP_085690274.1 | group II intron reverse transcriptase/maturase | - |
| I6N93_RS12330 () | 2816734..2817240 | - | 507 | Protein_2399 | single-stranded DNA-binding protein | - |
| I6N93_RS12335 () | 2817309..2817773 | - | 465 | WP_176222580.1 | DUF3577 domain-containing protein | - |
| I6N93_RS12340 () | 2818399..2820432 | - | 2034 | WP_085690071.1 | DNA topoisomerase III | - |
| I6N93_RS12345 () | 2820447..2821013 | - | 567 | WP_085690069.1 | hypothetical protein | - |
| I6N93_RS12350 () | 2821010..2821753 | - | 744 | WP_085690067.1 | TIGR03761 family integrating conjugative element protein | - |
| I6N93_RS12355 () | 2822044..2822597 | - | 554 | Protein_2404 | Tn3 family transposase TnpA_Tn3 | Transposase |
| I6N93_RS12360 () | 2822761..2823309 | + | 549 | WP_085690065.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| I6N93_RS12365 () | 2823333..2824670 | + | 1338 | WP_176222579.1 | hypothetical protein | - |
| I6N93_RS12370 () | 2824722..2825627 | + | 906 | WP_085690063.1 | DNA adenine methylase | - |
| I6N93_RS12375 () | 2826038..2827036 | - | 999 | WP_085690062.1 | Abi family protein | - |
| I6N93_RS12380 () | 2827413..2828639 | - | 1227 | WP_112123104.1 | helix-turn-helix domain-containing protein | - |
| I6N93_RS12385 () | 2828833..2829096 | - | 264 | WP_085690058.1 | hypothetical protein | - |
| I6N93_RS12390 () | 2829093..2829716 | - | 624 | WP_085690056.1 | DUF2857 domain-containing protein | - |
| I6N93_RS12395 () | 2829878..2830483 | - | 606 | Protein_2412 | DUF2786 domain-containing protein | - |
| I6N93_RS12400 () | 2830483..2832249 | - | 1767 | WP_085690054.1 | ParB family protein | - |
| I6N93_RS12405 () | 2832252..2833604 | - | 1353 | WP_085690052.1 | replicative DNA helicase | - |
| I6N93_RS12410 () | 2833615..2834169 | - | 555 | WP_176222578.1 | hypothetical protein | - |
| I6N93_RS12415 () | 2834166..2835092 | - | 927 | WP_085690050.1 | Iron-sulfur cluster carrier protein | VF |
| I6N93_RS12420 () | 2835388..2836656 | + | 1269 | WP_085690048.1 | hypothetical protein ; Integrase | Integrase |
| I6N93_RS12425 () | 2837079..2837948 | - | 870 | WP_085690073.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| I6N93_RS12430 () | 2838721..2839053 | - | 333 | WP_085690046.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| I6N93_RS12435 () | 2839054..2839311 | - | 258 | WP_085690044.1 | antitoxin | Antitoxin Detail |
| I6N93_RS12440 () | 2839531..2840208 | + | 678 | WP_197669156.1 | Iron-sulfur cluster carrier protein | VF |
| I6N93_RS12450 () | 2841609..2841857 | + | 249 | WP_139829925.1 | hypothetical protein | - |
| I6N93_RS12455 () | 2841902..2842045 | + | 144 | WP_176222543.1 | hypothetical protein | - |
| I6N93_RS12460 () | 2842269..2843363 | - | 1095 | WP_085687409.1 | IS91 family transposase ISAzo26 | Transposase |
| I6N93_RS12465 () | 2843350..2846367 | - | 3018 | WP_085687407.1 | toprim domain-containing protein | - |
| I6N93_RS12470 () | 2846471..2846860 | + | 390 | WP_085687419.1 | helix-turn-helix domain-containing protein | - |
| I6N93_RS12475 () | 2846942..2847178 | + | 237 | WP_085687405.1 | type I toxin-antitoxin system SymE family toxin | - |
| I6N93_RS12480 () | 2847218..2847739 | - | 522 | WP_085687403.1 | DUF2247 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|