MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 58370 bp
Accession: NZ_CP065430 Location: 265573..323942 Organism: Streptococcus suis strain YZDH1 Replicon: chromosome
Accession: NZ_CP065430 Location: 265573..323942 Organism: Streptococcus suis strain YZDH1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I5V48_RS01270 () | 261965..262813 | + | 849 | WP_002941046.1 | mechanosensitive ion channel family protein | - |
| I5V48_RS01275 () | 262824..263411 | + | 588 | WP_043025489.1 | DUF4352 domain-containing protein | - |
| I5V48_RS01280 () | 263660..265006 | - | 1347 | WP_043025487.1 | NADP-specific glutamate dehydrogenase | - |
| I5V48_RS01285 () | 265229..266167 | + | 939 | WP_043025486.1 | dihydroorotate oxidase | - |
| I5V48_RS01290 () | 266500..267732 | + | 1233 | WP_043025484.1 | CapA family protein | - |
| I5V48_RS01295 () | 267950..268798 | - | 849 | WP_174850325.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| I5V48_RS01300 () | 268880..269608 | + | 729 | WP_043025481.1 | hypothetical protein | - |
| I5V48_RS01305 () | 269605..271179 | + | 1575 | WP_029943135.1 | ABC transporter ATP-binding protein/permease | - |
| I5V48_RS01310 () | 271593..272408 | + | 816 | WP_161945746.1 | Cof-type HAD-IIB family hydrolase | - |
| I5V48_RS01315 () | 272486..273268 | - | 783 | WP_043025477.1 | ABC-2 family transporter protein | - |
| I5V48_RS01320 () | 273270..274049 | - | 780 | WP_043025475.1 | ABC-2 family transporter protein | - |
| I5V48_RS01325 () | 274042..275025 | - | 984 | WP_197315080.1 | ATP-binding cassette domain-containing protein | - |
| I5V48_RS01330 () | 275109..275642 | - | 534 | WP_024380160.1 | TetR/AcrR family transcriptional regulator C-terminal domain-containing protein | - |
| I5V48_RS01335 () | 275768..278227 | + | 2460 | WP_043025471.1 | YhgE/Pip domain-containing protein | - |
| I5V48_RS01340 () | 278277..279341 | - | 1065 | WP_043025470.1 | DUF4097 family beta strand repeat protein | - |
| I5V48_RS01345 () | 279338..280093 | - | 756 | WP_043025468.1 | DUF1700 domain-containing protein | - |
| I5V48_RS01350 () | 280080..280406 | - | 327 | WP_002937550.1 | PadR family transcriptional regulator | - |
| I5V48_RS01355 () | 280700..281080 | + | 381 | WP_043025465.1 | CidA/LrgA family protein | - |
| I5V48_RS01360 () | 281073..281768 | + | 696 | WP_043025463.1 | LrgB family protein | - |
| I5V48_RS01365 () | 281802..282602 | - | 801 | WP_043025462.1 | formate/nitrite transporter family protein | - |
| I5V48_RS01370 () | 282742..283587 | + | 846 | WP_043025461.1 | aquaporin family protein | - |
| I5V48_RS01375 () | 283718..283876 | + | 159 | Protein_238 | DUF853 family protein | - |
| I5V48_RS01380 () | 284006..284620 | + | 615 | WP_043025460.1 | CoA pyrophosphatase | - |
| I5V48_RS01385 () | 285140..285616 | + | 477 | WP_043026611.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| I5V48_RS01390 () | 285616..286413 | + | 798 | WP_043026612.1 | zeta toxin family protein | Toxin Detail |
| I5V48_RS01395 () | 286410..288029 | + | 1620 | WP_043026614.1 | hypothetical protein | - |
| I5V48_RS01400 () | 288016..288558 | + | 543 | WP_043026615.1 | hypothetical protein | - |
| I5V48_RS01405 () | 288551..291199 | + | 2649 | WP_197315081.1 | SMC family ATPase | - |
| I5V48_RS01410 () | 291333..292100 | + | 768 | WP_024397918.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| I5V48_RS01415 () | 292307..292729 | + | 423 | WP_043026620.1 | galactose-6-phosphate isomerase subunit LacA | - |
| I5V48_RS01420 () | 292756..293271 | + | 516 | WP_002941130.1 | galactose-6-phosphate isomerase subunit LacB | - |
| I5V48_RS01425 () | 293281..294213 | + | 933 | WP_043026622.1 | tagatose-6-phosphate kinase | - |
| I5V48_RS01430 () | 294215..295192 | + | 978 | WP_043026624.1 | tagatose-bisphosphate aldolase | - |
| I5V48_RS01435 () | 295381..296214 | + | 834 | WP_043026626.1 | PRD domain-containing protein | - |
| I5V48_RS01440 () | 296452..296769 | + | 318 | WP_003048451.1 | PTS lactose/cellobiose transporter subunit IIA | - |
| I5V48_RS01445 () | 296769..298448 | + | 1680 | WP_043026628.1 | lactose-specific PTS transporter subunit EIIC | - |
| I5V48_RS01450 () | 298682..300088 | + | 1407 | WP_024417320.1 | 6-phospho-beta-galactosidase | - |
| I5V48_RS01455 () | 300153..301046 | + | 894 | WP_043026631.1 | aldose 1-epimerase family protein | - |
| I5V48_RS01460 () | 301098..301937 | + | 840 | WP_043026632.1 | metallophosphoesterase | - |
| I5V48_RS01465 () | 302343..302810 | + | 468 | WP_105151961.1 | hypothetical protein | - |
| I5V48_RS01470 () | 302964..303530 | + | 567 | WP_105151960.1 | hypothetical protein | - |
| I5V48_RS01475 () | 303582..303830 | + | 249 | WP_105149471.1 | hypothetical protein | - |
| I5V48_RS01480 () | 303781..305157 | + | 1377 | WP_105151959.1 | cell division protein FtsK | - |
| I5V48_RS01485 () | 305435..305854 | + | 420 | WP_029694582.1 | hypothetical protein | - |
| I5V48_RS01490 () | 305860..306876 | + | 1017 | WP_105149473.1 | replication initiation factor domain-containing protein | - |
| I5V48_RS01495 () | 306937..307185 | + | 249 | WP_017647554.1 | hypothetical protein | - |
| I5V48_RS01500 () | 307201..308697 | + | 1497 | WP_105151957.1 | tyrosine-type recombinase/integrase | - |
| I5V48_RS01505 () | 308791..308940 | - | 150 | WP_002262412.1 | 50S ribosomal protein L33 | - |
| I5V48_RS01510 () | 308956..309138 | - | 183 | WP_002937589.1 | 50S ribosomal protein L32 | - |
| I5V48_RS01515 () | 309456..311921 | + | 2466 | WP_197315082.1 | SEC10/PgrA surface exclusion domain-containing protein | - |
| I5V48_RS01520 () | 311924..312076 | + | 153 | WP_153595848.1 | hypothetical protein | - |
| I5V48_RS01525 () | 312352..313053 | + | 702 | WP_029178204.1 | hypothetical protein | - |
| I5V48_RS01530 () | 313168..314451 | + | 1284 | WP_043024678.1 | histidine--tRNA ligase | - |
| I5V48_RS01535 () | 314532..315557 | - | 1026 | WP_043024679.1 | alcohol dehydrogenase AdhP | - |
| I5V48_RS01540 () | 316003..318654 | + | 2652 | WP_024409509.1 | bifunctional acetaldehyde-CoA/alcohol dehydrogenase | - |
| I5V48_RS01545 () | 319156..320640 | + | 1485 | WP_043033794.1 | threonine synthase | - |
| I5V48_RS01550 () | 320769..322529 | + | 1761 | WP_043033792.1 | ABC transporter ATP-binding protein/permease | - |
| I5V48_RS01555 () | 322522..324183 | + | 1662 | WP_043026652.1 | ABC transporter ATP-binding protein/permease | - |
| I5V48_RS01560 () | 324184..324777 | + | 594 | WP_043026653.1 | MptD family putative ECF transporter S component | - |
| I5V48_RS01565 () | 324774..325433 | + | 660 | WP_043026655.1 | energy-coupling factor transporter transmembrane protein EcfT | - |
| I5V48_RS01570 () | 325397..326824 | + | 1428 | WP_043026657.1 | ABC transporter ATP-binding protein | - |
| I5V48_RS01575 () | 326830..328107 | + | 1278 | WP_043026659.1 | MATE family efflux transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|