MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 87213 bp
Accession: NZ_CP065417 Location: 5624559..5711771 Organism: Pseudomonas aeruginosa isolate P23 Replicon: chromosome
Accession: NZ_CP065417 Location: 5624559..5711771 Organism: Pseudomonas aeruginosa isolate P23 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I5U72_RS26055 () | 5620077..5624329 | + | 4253 | Protein_5154 | two-partner secretion system exoprotein TpsA4 | - |
| I5U72_RS26060 () | 5624696..5625556 | + | 861 | WP_023082029.1 | ParA family protein | - |
| I5U72_RS26065 () | 5625558..5626286 | + | 729 | WP_025298022.1 | hypothetical protein | - |
| I5U72_RS26070 () | 5626283..5626780 | + | 498 | WP_196994394.1 | hypothetical protein | - |
| I5U72_RS26075 () | 5626786..5627238 | + | 453 | Protein_5158 | hypothetical protein | - |
| I5U72_RS26080 () | 5627299..5627928 | + | 630 | WP_044060901.1 | hypothetical protein | - |
| I5U72_RS26085 () | 5627928..5628629 | + | 702 | WP_023082648.1 | DUF2786 domain-containing protein | - |
| I5U72_RS26090 () | 5628626..5629333 | + | 708 | WP_023082649.1 | HNH endonuclease | - |
| I5U72_RS26095 () | 5629317..5629541 | + | 225 | WP_009315888.1 | hypothetical protein | - |
| I5U72_RS26100 () | 5629538..5630881 | + | 1344 | WP_023082650.1 | replicative DNA helicase | - |
| I5U72_RS26105 () | 5631320..5631766 | - | 447 | WP_003117028.1 | hypothetical protein | - |
| I5U72_RS26110 () | 5632701..5633138 | - | 438 | WP_003157043.1 | hypothetical protein | - |
| I5U72_RS26115 () | 5633316..5633501 | + | 186 | WP_003157042.1 | hypothetical protein | - |
| I5U72_RS26120 () | 5633491..5634018 | + | 528 | WP_003448815.1 | hypothetical protein | - |
| I5U72_RS26125 () | 5634015..5634272 | + | 258 | WP_003448812.1 | hypothetical protein | - |
| I5U72_RS26130 () | 5634265..5634504 | + | 240 | WP_023082652.1 | hypothetical protein | - |
| I5U72_RS26135 () | 5634497..5634730 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| I5U72_RS26140 () | 5634730..5635752 | + | 1023 | WP_010792224.1 | nucleoid-associated protein YejK | - |
| I5U72_RS26145 () | 5635749..5636639 | + | 891 | WP_025298026.1 | DNA adenine methylase | - |
| I5U72_RS26150 () | 5636660..5636929 | + | 270 | WP_012076847.1 | Arc family DNA-binding protein | - |
| I5U72_RS26155 () | 5636926..5638659 | + | 1734 | WP_031637209.1 | ParB family protein | - |
| I5U72_RS26160 () | 5638687..5639442 | + | 756 | WP_012076849.1 | DUF2857 domain-containing protein | - |
| I5U72_RS26165 () | 5639445..5640770 | + | 1326 | WP_031637207.1 | hypothetical protein | - |
| I5U72_RS26170 () | 5641284..5641481 | + | 198 | WP_023082036.1 | hypothetical protein | - |
| I5U72_RS26175 () | 5641638..5642366 | + | 729 | WP_023082037.1 | TIGR03761 family integrating conjugative element protein | - |
| I5U72_RS26180 () | 5642372..5642920 | + | 549 | WP_023082038.1 | DUF3158 family protein | - |
| I5U72_RS26185 () | 5642968..5643810 | + | 843 | WP_023082039.1 | Rha family transcriptional regulator | - |
| I5U72_RS26190 () | 5643840..5644328 | + | 489 | WP_023082040.1 | single-stranded DNA-binding protein | - |
| I5U72_RS26195 () | 5644436..5644789 | + | 354 | WP_003120979.1 | helix-turn-helix domain-containing protein | - |
| I5U72_RS26200 () | 5644909..5645076 | + | 168 | WP_128729268.1 | CrpP family protein | - |
| I5U72_RS26205 () | 5645191..5647110 | + | 1920 | WP_023082041.1 | type I DNA topoisomerase | - |
| I5U72_RS26210 () | 5647118..5647870 | + | 753 | WP_023082042.1 | hypothetical protein | - |
| I5U72_RS26215 () | 5648170..5650059 | + | 1890 | WP_196994395.1 | hypothetical protein | - |
| I5U72_RS26220 () | 5650056..5652032 | + | 1977 | WP_016851611.1 | DEAD/DEAH box helicase | - |
| I5U72_RS26225 () | 5652173..5652517 | + | 345 | WP_016851612.1 | hypothetical protein | - |
| I5U72_RS26230 () | 5652588..5652878 | - | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| I5U72_RS26235 () | 5652875..5653174 | - | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| I5U72_RS26240 () | 5653376..5654500 | + | 1125 | WP_012076859.1 | hypothetical protein | VF |
| I5U72_RS26245 () | 5654500..5656209 | + | 1710 | WP_003099757.1 | hypothetical protein | VF |
| I5U72_RS26250 () | 5656213..5657538 | + | 1326 | WP_003099758.1 | type 4b pilus protein PilO2 | - |
| I5U72_RS26255 () | 5657528..5658061 | + | 534 | WP_003099760.1 | type IV pilus biogenesis protein PilP | - |
| I5U72_RS26260 () | 5658070..5659650 | + | 1581 | WP_003099761.1 | hypothetical protein | VF |
| I5U72_RS26265 () | 5659650..5660729 | + | 1080 | WP_003123335.1 | hypothetical protein | VF |
| I5U72_RS26270 () | 5660751..5661281 | + | 531 | WP_023093859.1 | hypothetical protein | VF |
| I5U72_RS26275 () | 5661278..5662234 | + | 957 | WP_023093675.1 | Flp pilus assembly complex ATPase component TadA | - |
| I5U72_RS26280 () | 5662227..5663606 | + | 1380 | WP_023093860.1 | hypothetical protein | VF |
| I5U72_RS26285 () | 5663624..5664061 | + | 438 | WP_023093861.1 | hypothetical protein | VF |
| I5U72_RS26290 () | 5665060..5666046 | + | 987 | WP_003099775.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| I5U72_RS26295 () | 5666359..5666925 | + | 567 | WP_003099777.1 | hypothetical protein | - |
| I5U72_RS26300 () | 5667002..5667142 | + | 141 | WP_003099780.1 | hypothetical protein | - |
| I5U72_RS26305 () | 5667640..5668128 | + | 489 | WP_003099785.1 | DUF3577 domain-containing protein | - |
| I5U72_RS26310 () | 5668266..5668424 | + | 159 | WP_003099787.1 | hypothetical protein | - |
| I5U72_RS26315 () | 5668498..5668695 | + | 198 | WP_003099789.1 | hypothetical protein | - |
| I5U72_RS26320 () | 5668815..5669183 | + | 369 | WP_003099790.1 | hypothetical protein | - |
| I5U72_RS26325 () | 5669426..5669776 | + | 351 | WP_004347949.1 | hypothetical protein | - |
| I5U72_RS26330 () | 5669833..5670465 | + | 633 | WP_196994077.1 | DUF3275 family protein | - |
| I5U72_RS26335 () | 5670462..5670737 | + | 276 | WP_003099794.1 | hypothetical protein | - |
| I5U72_RS26340 () | 5670807..5671169 | + | 363 | WP_003099795.1 | hypothetical protein | - |
| I5U72_RS26345 () | 5671237..5671497 | + | 261 | WP_003099797.1 | hypothetical protein | - |
| I5U72_RS26350 () | 5671590..5672195 | + | 606 | WP_003099799.1 | hypothetical protein | - |
| I5U72_RS26355 () | 5672225..5673670 | + | 1446 | WP_003099801.1 | class I SAM-dependent methyltransferase | - |
| I5U72_RS26360 () | 5673775..5676024 | + | 2250 | WP_042166055.1 | DEAD/DEAH box helicase | - |
| I5U72_RS26365 () | 5676119..5676575 | + | 457 | Protein_5216 | IS3 family transposase | - |
| I5U72_RS26370 () | 5676775..5677965 | + | 1191 | WP_042166058.1 | three-Cys-motif partner protein TcmP | - |
| I5U72_RS26375 () | 5678198..5678941 | + | 744 | WP_003117069.1 | phage Gp37/Gp68 family protein | - |
| I5U72_RS26380 () | 5678959..5680293 | + | 1335 | WP_003117070.1 | three-Cys-motif partner protein TcmP | - |
| I5U72_RS26385 () | 5680745..5681443 | + | 699 | WP_023094353.1 | hypothetical protein | - |
| I5U72_RS26390 () | 5681454..5682209 | + | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| I5U72_RS26395 () | 5682194..5682775 | + | 582 | WP_003117072.1 | hypothetical protein | VF |
| I5U72_RS26400 () | 5682772..5683272 | + | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| I5U72_RS26405 () | 5683344..5683550 | + | 207 | WP_073689213.1 | hypothetical protein | - |
| I5U72_RS26410 () | 5683554..5685785 | + | 2232 | WP_196994078.1 | type IV conjugative transfer system coupling protein TraD | - |
| I5U72_RS26415 () | 5685785..5686531 | + | 747 | WP_003086173.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| I5U72_RS26420 () | 5686549..5687040 | + | 492 | WP_003109389.1 | hypothetical protein | - |
| I5U72_RS26425 () | 5687280..5688761 | + | 1482 | WP_042166176.1 | UvrD-helicase domain-containing protein | - |
| I5U72_RS26430 () | 5688870..5689175 | + | 306 | WP_058016274.1 | hypothetical protein | - |
| I5U72_RS26435 () | 5689269..5689607 | + | 339 | WP_003158157.1 | RAQPRD family integrative conjugative element protein | - |
| I5U72_RS26440 () | 5689604..5689843 | + | 240 | WP_003121019.1 | TIGR03758 family integrating conjugative element protein | - |
| I5U72_RS26445 () | 5689861..5690217 | + | 357 | WP_003117077.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| I5U72_RS26450 () | 5690228..5690614 | + | 387 | WP_003117078.1 | TIGR03750 family conjugal transfer protein | - |
| I5U72_RS26455 () | 5690611..5691270 | + | 660 | WP_003117079.1 | TIGR03746 family integrating conjugative element protein | - |
| I5U72_RS26460 () | 5691267..5692151 | + | 885 | WP_003121020.1 | TIGR03749 family integrating conjugative element protein | - |
| I5U72_RS26465 () | 5692135..5693640 | + | 1506 | WP_003121021.1 | TIGR03752 family integrating conjugative element protein | - |
| I5U72_RS26470 () | 5693618..5694061 | + | 444 | WP_003121022.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| I5U72_RS26475 () | 5694061..5697003 | + | 2943 | WP_179063012.1 | conjugative transfer ATPase | - |
| I5U72_RS26480 () | 5697000..5697284 | + | 285 | WP_003086159.1 | hypothetical protein | - |
| I5U72_RS26485 () | 5697281..5697952 | + | 672 | WP_023092929.1 | DsbA family protein | - |
| I5U72_RS26490 () | 5698135..5699361 | + | 1227 | WP_071536083.1 | DNA cytosine methyltransferase | - |
| I5U72_RS26495 () | 5699348..5701450 | - | 2103 | WP_023092930.1 | ATP-binding protein | - |
| I5U72_RS26500 () | 5701716..5702147 | + | 432 | WP_023518409.1 | TIGR03757 family integrating conjugative element protein | - |
| I5U72_RS26505 () | 5702147..5703085 | + | 939 | WP_012076879.1 | TIGR03756 family integrating conjugative element protein | - |
| I5U72_RS26510 () | 5703103..5704485 | + | 1383 | WP_050413521.1 | integrating conjugative element protein | - |
| I5U72_RS26515 () | 5704485..5704832 | + | 348 | WP_003099870.1 | hypothetical protein | - |
| I5U72_RS26520 () | 5704829..5706370 | + | 1542 | WP_196994396.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| I5U72_RS26525 () | 5706561..5706785 | - | 225 | Protein_5248 | hypothetical protein | - |
| I5U72_RS26530 () | 5707290..5709179 | + | 1890 | WP_196994397.1 | helicase/relaxase domain-containing protein | - |
| I5U72_RS26535 () | 5709176..5710516 | + | 1341 | WP_003099879.1 | hypothetical protein ; Integrase | Integrase |
| I5U72_RS26540 () | 5710970..5711527 | + | 558 | Protein_5251 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| I5U72_RS26560 () | 5712209..5714773 | - | 2565 | WP_003145976.1 | ATP-dependent chaperone ClpB | - |
| I5U72_RS26565 () | 5714929..5715657 | - | 729 | WP_003116257.1 | peptidoglycan editing factor PgeF | - |
| I5U72_RS26570 () | 5715654..5716616 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|