MGE detailed information
MGE type: Genomic_island MGE length: 47623 bp
Accession: NZ_CP065369 Location: 2932249..2979871 Organism: Vibrio parahaemolyticus strain 20-082A3 Replicon: chromosome
Accession: NZ_CP065369 Location: 2932249..2979871 Organism: Vibrio parahaemolyticus strain 20-082A3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I5M77_RS13960 () | 2927700..2928827 | - | 1128 | WP_025793165.1 | 5-(carboxyamino)imidazole ribonucleotide synthase | - |
| I5M77_RS13965 () | 2928832..2929317 | - | 486 | WP_005394016.1 | 5-(carboxyamino)imidazole ribonucleotide mutase | - |
| I5M77_RS13970 () | 2929517..2930074 | + | 558 | WP_005461456.1 | threonylcarbamoyl-AMP synthase | - |
| I5M77_RS13975 () | 2930122..2931039 | + | 918 | WP_024699626.1 | oxygen-dependent coproporphyrinogen oxidase | - |
| I5M77_RS13980 () | 2931141..2931974 | + | 834 | WP_015297507.1 | shikimate dehydrogenase | - |
| I5M77_RS13985 () | 2931978..2932241 | + | 264 | WP_005497408.1 | DUF1488 domain-containing protein | - |
| I5M77_RS13990 () | 2932249..2932797 | - | 549 | WP_024699628.1 | Protein YrdA | VF |
| I5M77_RS14030 () | 2938856..2940199 | + | 1344 | WP_156216666.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| I5M77_RS14035 () | 2940192..2940575 | + | 384 | WP_156216668.1 | hypothetical protein | - |
| I5M77_RS14040 () | 2940585..2940773 | + | 189 | WP_000342585.1 | hypothetical protein | - |
| I5M77_RS14045 () | 2941035..2941439 | + | 405 | WP_000127617.1 | hypothetical protein | Antitoxin Detail |
| I5M77_RS14050 () | 2941442..2942383 | + | 942 | WP_156216669.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| I5M77_RS14055 () | 2942392..2942958 | + | 567 | Protein_2739 | SAM-dependent DNA methyltransferase | - |
| I5M77_RS14060 () | 2943030..2943305 | - | 276 | WP_156216623.1 | hypothetical protein | - |
| I5M77_RS14065 () | 2943609..2943821 | + | 213 | WP_033929743.1 | helix-turn-helix domain-containing protein | - |
| I5M77_RS14070 () | 2943860..2944972 | - | 1113 | WP_156216625.1 | hypothetical protein | - |
| I5M77_RS14075 () | 2944972..2945568 | - | 597 | WP_107111805.1 | pancortin-3 | - |
| I5M77_RS14080 () | 2945594..2946310 | - | 717 | WP_196952916.1 | M48 family metallopeptidase | - |
| I5M77_RS14085 () | 2946358..2949639 | - | 3282 | WP_156216629.1 | type I restriction endonuclease subunit R | - |
| I5M77_RS14090 () | 2949683..2952250 | - | 2568 | WP_156216631.1 | AAA family ATPase | - |
| I5M77_RS14095 () | 2952264..2953481 | - | 1218 | WP_156216633.1 | restriction endonuclease subunit S | - |
| I5M77_RS14100 () | 2953471..2954994 | - | 1524 | WP_156216634.1 | type I restriction-modification system subunit M | - |
| I5M77_RS14105 () | 2955067..2955654 | - | 588 | WP_156216636.1 | restriction endonuclease subunit S | - |
| I5M77_RS14110 () | 2955797..2957182 | + | 1386 | WP_156216638.1 | IS91 family transposase ISTha3 | Transposase |
| I5M77_RS14115 () | 2957172..2959781 | + | 2610 | WP_156216640.1 | hypothetical protein | - |
| I5M77_RS14120 () | 2959778..2961778 | + | 2001 | WP_156216642.1 | hypothetical protein ; Integrase | Integrase |
| I5M77_RS14125 () | 2961775..2962158 | + | 384 | WP_156216644.1 | hypothetical protein | - |
| I5M77_RS14130 () | 2962348..2964366 | + | 2019 | Protein_2754 | N-6 DNA methylase | - |
| I5M77_RS14135 () | 2964359..2965639 | + | 1281 | WP_052143261.1 | restriction endonuclease subunit S | - |
| I5M77_RS14140 () | 2965757..2968873 | + | 3117 | WP_156216671.1 | HsdR family type I site-specific deoxyribonuclease | - |
| I5M77_RS14145 () | 2969002..2969295 | - | 294 | WP_033931510.1 | hypothetical protein | - |
| I5M77_RS14150 () | 2969463..2969792 | - | 330 | WP_156216673.1 | hypothetical protein | - |
| I5M77_RS14155 () | 2970308..2970547 | + | 240 | WP_001084862.1 | helix-turn-helix domain-containing protein | - |
| I5M77_RS14160 () | 2970856..2971956 | + | 1101 | WP_033931513.1 | Tn3 family transposase TnpR_ISNpu13 | Transposase |
| I5M77_RS14165 () | 2972054..2973571 | + | 1518 | WP_156216674.1 | hypothetical protein | - |
| I5M77_RS14170 () | 2973642..2974658 | + | 1017 | WP_196952895.1 | hypothetical protein | - |
| I5M77_RS14175 () | 2974703..2975230 | + | 528 | WP_033931516.1 | hypothetical protein | - |
| I5M77_RS14180 () | 2975633..2976757 | + | 1125 | WP_102589961.1 | hypothetical protein | - |
| I5M77_RS14185 () | 2976754..2977170 | + | 417 | WP_033931519.1 | hypothetical protein | - |
| I5M77_RS14190 () | 2977167..2977922 | + | 756 | WP_052143263.1 | hypothetical protein | - |
| I5M77_RS14195 () | 2977986..2978237 | - | 252 | WP_031854775.1 | helix-turn-helix domain-containing protein | - |
| I5M77_RS14200 () | 2979488..2979871 | + | 384 | WP_005497358.1 | fluoride efflux transporter CrcB | - |
| I5M77_RS14205 () | 2980200..2982140 | + | 1941 | WP_025548309.1 | phosphomethylpyrimidine synthase ThiC | - |
| I5M77_RS14210 () | 2982140..2983474 | + | 1335 | WP_025793393.1 | thiamine phosphate synthase | - |
| I5M77_RS14215 () | 2983464..2984246 | + | 783 | WP_025793394.1 | thiazole biosynthesis adenylyltransferase ThiF | - |
| I5M77_RS14220 () | 2984326..2984529 | + | 204 | WP_005497365.1 | sulfur carrier protein ThiS | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|