MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 66678 bp
Accession: NZ_CP065361 Location: 1..66678 Organism: Ruegeria sp. SCSIO 43209 Replicon: plasmid unnamed2
Accession: NZ_CP065361 Location: 1..66678 Organism: Ruegeria sp. SCSIO 43209 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I5192_RS19230 (I5192_19215) | 755..1666 | - | 912 | WP_009827041.1 | DUF2493 domain-containing protein | - |
| I5192_RS19235 (I5192_19220) | 1978..3024 | - | 1047 | WP_223118425.1 | toprim domain-containing protein | - |
| I5192_RS19240 (I5192_19225) | 3021..7417 | - | 4397 | Protein_3 | strawberry notch family protein | - |
| I5192_RS19245 (I5192_19230) | 7544..7843 | - | 300 | WP_009827038.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| I5192_RS19250 (I5192_19235) | 7836..8087 | - | 252 | WP_009827037.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| I5192_RS19255 (I5192_19240) | 8209..8781 | - | 573 | WP_223118426.1 | hypothetical protein | - |
| I5192_RS19260 (I5192_19245) | 8887..9363 | - | 477 | WP_009827035.1 | hypothetical protein | - |
| I5192_RS19265 (I5192_19250) | 9365..9748 | - | 384 | WP_009827034.1 | hypothetical protein | - |
| I5192_RS19270 (I5192_19255) | 9827..10123 | - | 297 | WP_223118427.1 | hypothetical protein | - |
| I5192_RS19275 (I5192_19260) | 10240..10620 | - | 381 | WP_009827032.1 | DUF3768 domain-containing protein | - |
| I5192_RS22595 | 10747..11634 | - | 888 | WP_255612204.1 | hypothetical protein | - |
| I5192_RS22600 | 11631..12917 | - | 1287 | WP_255612205.1 | ParB/RepB/Spo0J family partition protein | - |
| I5192_RS19290 (I5192_19275) | 14414..14872 | - | 459 | WP_007120589.1 | acyl-CoA thioesterase | - |
| I5192_RS19295 (I5192_19280) | 14946..15686 | - | 741 | WP_255612206.1 | Right origin-binding protein | VF |
| I5192_RS19300 (I5192_19285) | 15880..17082 | - | 1203 | WP_007120591.1 | CoA transferase | - |
| I5192_RS19305 (I5192_19290) | 17082..18236 | - | 1155 | WP_007120592.1 | Long-chain-alcohol dehydrogenase 1 | VF |
| I5192_RS19310 (I5192_19295) | 18255..19415 | - | 1161 | WP_007120593.1 | acyl-CoA dehydrogenase family protein | - |
| I5192_RS19315 (I5192_19300) | 19431..20225 | - | 795 | WP_223118428.1 | IclR family transcriptional regulator | - |
| I5192_RS19320 (I5192_19305) | 20397..21851 | + | 1455 | WP_232272174.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| I5192_RS19325 (I5192_19310) | 21860..23941 | + | 2082 | WP_197918802.1 | FAD-dependent oxidoreductase | - |
| I5192_RS19330 (I5192_19315) | 24017..24950 | - | 934 | Protein_22 | IS5 family transposase | - |
| I5192_RS19335 (I5192_19320) | 25203..26105 | + | 903 | WP_009827026.1 | Monoterpene epsilon-lactone hydrolase | VF |
| I5192_RS19340 (I5192_19325) | 26231..27868 | + | 1638 | WP_009827025.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| I5192_RS19345 (I5192_19330) | 27941..28696 | + | 756 | WP_037954867.1 | Cyclopentanol dehydrogenase | VF |
| I5192_RS19350 (I5192_19335) | 28773..29531 | + | 759 | WP_009827023.1 | electron transfer flavoprotein subunit beta/FixA family protein | - |
| I5192_RS19355 (I5192_19340) | 29531..30457 | + | 927 | WP_009827022.1 | FAD-binding protein | - |
| I5192_RS19360 (I5192_19345) | 30454..31653 | + | 1200 | WP_007120599.1 | 3-oxoadipyl-CoA thiolase | - |
| I5192_RS19365 (I5192_19350) | 31977..32186 | + | 210 | WP_007120600.1 | hypothetical protein | VF |
| I5192_RS19370 (I5192_19355) | 32263..32463 | + | 201 | WP_007120601.1 | hypothetical protein | - |
| I5192_RS19375 (I5192_19360) | 32457..33035 | - | 579 | WP_007120602.1 | hypothetical protein | - |
| I5192_RS19380 (I5192_19365) | 33168..33482 | + | 315 | WP_007120603.1 | hypothetical protein | - |
| I5192_RS19385 (I5192_19370) | 33562..34119 | + | 558 | WP_223118410.1 | lytic transglycosylase domain-containing protein | - |
| I5192_RS19390 (I5192_19375) | 34218..34403 | + | 186 | WP_255612193.1 | TrbC/VirB2 family protein | - |
| I5192_RS19395 (I5192_19380) | 34478..34825 | + | 348 | WP_255612194.1 | VirB3 family type IV secretion system protein | - |
| I5192_RS19400 (I5192_19385) | 34800..37193 | + | 2394 | WP_007120607.1 | Type IV secretion system protein virB4 | VF |
| I5192_RS19405 (I5192_19390) | 37190..37399 | + | 210 | WP_007120608.1 | hypothetical protein | - |
| I5192_RS19410 (I5192_19395) | 37396..38508 | + | 1113 | WP_007120609.1 | lytic transglycosylase domain-containing protein | - |
| I5192_RS19415 (I5192_19400) | 38505..39272 | + | 768 | WP_007120610.1 | type IV secretion system protein | - |
| I5192_RS19420 (I5192_19405) | 39269..39706 | + | 438 | WP_255612195.1 | hypothetical protein | - |
| I5192_RS19425 (I5192_19410) | 39707..40720 | + | 1014 | WP_223118411.1 | hypothetical protein | VF |
| I5192_RS19430 (I5192_19415) | 40738..41418 | + | 681 | WP_223118412.1 | Type IV secretion system protein PtlE | VF |
| I5192_RS19435 (I5192_19420) | 41424..42146 | + | 723 | WP_223118414.1 | Type IV secretion system protein virB9 | VF |
| I5192_RS19440 (I5192_19425) | 42174..43573 | + | 1400 | Protein_44 | TrbI/VirB10 family protein | - |
| I5192_RS19445 (I5192_19430) | 43570..44550 | + | 981 | WP_223118415.1 | Type IV secretion system protein VirB11 | VF |
| I5192_RS19450 (I5192_19435) | 44662..45696 | + | 1035 | WP_223118429.1 | IS110 family transposase ISAzs32 | Transposase |
| I5192_RS19455 (I5192_19440) | 46157..47179 | + | 1023 | WP_009807931.1 | AraC family transcriptional regulator | - |
| I5192_RS19460 (I5192_19445) | 47276..48475 | + | 1200 | WP_009807932.1 | serine hydrolase domain-containing protein | - |
| I5192_RS19465 (I5192_19450) | 48634..49749 | - | 1116 | WP_223118417.1 | hypothetical protein | - |
| I5192_RS19470 (I5192_19455) | 49841..50050 | - | 210 | WP_223118418.1 | hypothetical protein | - |
| I5192_RS22605 | 50121..51313 | - | 1193 | Protein_51 | Protein VirD4 | VF |
| I5192_RS22610 | 51232..51711 | - | 480 | WP_255612209.1 | Protein VirD4 | VF |
| I5192_RS22615 | 52543..52791 | - | 249 | WP_255612196.1 | hypothetical protein | - |
| I5192_RS22620 | 52785..53360 | - | 576 | WP_255612197.1 | hypothetical protein | - |
| I5192_RS22625 | 53360..53575 | - | 216 | WP_255612198.1 | T-DNA border endonuclease VirD2 | Relaxase |
| I5192_RS22630 | 53823..53978 | - | 156 | WP_255612199.1 | hypothetical protein | - |
| I5192_RS19485 (I5192_19470) | 53971..54786 | - | 816 | WP_255612200.1 | helix-turn-helix domain-containing protein | - |
| I5192_RS19490 (I5192_19475) | 55219..55395 | - | 177 | WP_255612201.1 | hypothetical protein | - |
| I5192_RS19495 (I5192_19480) | 56029..56367 | - | 339 | WP_017470241.1 | DUF736 family protein | - |
| I5192_RS19500 | 56970..57188 | + | 219 | WP_223118420.1 | hypothetical protein | - |
| I5192_RS19505 (I5192_19485) | 57300..57881 | + | 582 | WP_223118421.1 | plasmid pRiA4b ORF-3 family protein | - |
| I5192_RS19510 (I5192_19490) | 58128..58958 | + | 831 | WP_223118422.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| I5192_RS19515 (I5192_19495) | 58948..59865 | + | 918 | WP_223118423.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| I5192_RS22635 | 59922..60047 | - | 126 | WP_255612202.1 | hypothetical protein | - |
| I5192_RS19520 (I5192_19500) | 60044..60640 | - | 597 | WP_107817737.1 | DUF6088 family protein | - |
| I5192_RS19525 (I5192_19505) | 60991..62013 | + | 1023 | WP_223118424.1 | IS110 family transposase ISMmg2 | Transposase |
| I5192_RS19535 (I5192_19515) | 62189..66307 | + | 4119 | WP_255612203.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|