NZ_CP065177256952..430805

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 173854 bp
Accession: NZ_CP065177        Location: 256952..430805         Organism: Pectobacterium quasiaquaticum strain A477-S1-J17       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
IG609_RS01180 (IG609_001170) 258849..259610 - 762 WP_193397223.1 Glutamine transport ATP-binding protein GlnQ VF
IG609_RS01185 (IG609_001175) 259619..260713 - 1095 WP_193397222.1 amino acid ABC transporter permease -
IG609_RS01190 (IG609_001180) 260723..261901 - 1179 WP_193397221.1 amino acid ABC transporter permease -
IG609_RS01195 (IG609_001185) 261968..262993 - 1026 WP_193397220.1 amino acid ABC transporter substrate-binding protein -
IG609_RS01200 (IG609_001190) 263354..264019 - 666 WP_193397219.1 amino acid ABC transporter permease -
IG609_RS01205 (IG609_001195) 264062..264829 - 768 WP_039278965.1 amino acid ABC transporter substrate-binding protein -
IG609_RS01210 (IG609_001200) 264986..265384 - 399 WP_102119396.1 helix-turn-helix domain-containing protein -
IG609_RS01215 (IG609_001205) 265527..266039 + 513 WP_193397218.1 nuclear transport factor 2 family protein -
IG609_RS01220 (IG609_001210) 266112..267302 + 1191 WP_226373442.1 aldo/keto reductase -
IG609_RS01225 (IG609_001215) 267563..268708 + 1146 WP_193397217.1 endonuclease/exonuclease/phosphatase family protein -
IG609_RS01230 (IG609_001220) 268776..269180 + 405 WP_193397216.1 ASCH domain-containing protein -
IG609_RS01235 (IG609_001225) 269333..269830 - 498 WP_167469167.1 hypothetical protein -
IG609_RS01240 (IG609_001230) 270048..270227 - 180 WP_193397215.1 YlcI/YnfO family protein -
IG609_RS01245 (IG609_001235) 270416..270604 + 189 WP_193397214.1 host cell division inhibitor Icd-like protein -
IG609_RS01250 (IG609_001240) 270597..270788 + 192 WP_119873435.1 hypothetical protein -
IG609_RS01255 (IG609_001245) 270924..271220 - 297 WP_005975342.1 DNA-binding transcriptional regulator Fis -
IG609_RS01260 (IG609_001250) 271244..272209 - 966 WP_193397213.1 tRNA dihydrouridine synthase DusB -
IG609_RS01265 (IG609_001255) 272567..273301 - 735 WP_193397212.1 carbonic anhydrase -
IG609_RS01270 (IG609_001260) 273476..274363 - 888 WP_193397211.1 50S ribosomal protein L11 methyltransferase -
IG609_RS01275 (IG609_001265) 274381..275832 - 1452 WP_193397210.1 sodium/pantothenate symporter -
IG609_RS01280 (IG609_001270) 275822..276064 - 243 WP_193397209.1 YhdT family protein -
IG609_RS01285 (IG609_001275) 276232..277575 - 1344 WP_102119386.1 acetyl-CoA carboxylase biotin carboxylase subunit -
IG609_RS01290 (IG609_001280) 277587..278054 - 468 WP_102119385.1 acetyl-CoA carboxylase biotin carboxyl carrier protein -
IG609_RS01295 (IG609_001285) 278079..278531 - 453 WP_010300311.1 type II 3-dehydroquinate dehydratase -
IG609_RS01300 (IG609_001290) 278786..279385 - 600 WP_193397208.1 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ -
IG609_RS01305 (IG609_001295) 279464..280465 - 1002 WP_193397207.1 protein-methionine-sulfoxide reductase catalytic subunit MsrP -
IG609_RS01310 (IG609_001300) 280764..281741 - 978 WP_193397206.1 MDR family oxidoreductase -
IG609_RS01315 (IG609_001305) 281927..283864 + 1938 WP_193397205.1 RNase E specificity factor CsrD VF
IG609_RS01320 (IG609_001310) 284181..285224 + 1044 WP_010300322.1 rod shape-determining protein MreB -
IG609_RS01325 (IG609_001315) 285398..286381 + 984 WP_102119540.1 rod shape-determining protein MreC -
IG609_RS01330 (IG609_001320) 286378..286866 + 489 WP_012772977.1 rod shape-determining protein MreD -
IG609_RS01335 (IG609_001325) 286875..287468 + 594 WP_193397204.1 Maf family protein -
IG609_RS01340 (IG609_001330) 287458..288927 + 1470 WP_102119538.1 ribonuclease G -
IG609_RS01345 (IG609_001335) 288969..292799 + 3831 WP_193397203.1 AsmA2 domain-containing protein YhdP -
IG609_RS01350 (IG609_001340) 292856..294301 + 1446 WP_193397202.1 metalloprotease TldD -
IG609_RS01355 (IG609_001345) 294375..294968 - 594 WP_193397201.1 hypothetical protein -
IG609_RS01360 (IG609_001350) 294978..295274 - 297 WP_193397200.1 hypothetical protein -
IG609_RS01365 (IG609_001355) 295426..296361 - 936 WP_039462621.1 HTH-type transcriptional activator AaeR -
IG609_RS01370 (IG609_001360) 296696..296899 + 204 WP_005975424.1 p-hydroxybenzoic acid efflux pump operon protein AaeX -
IG609_RS01375 (IG609_001365) 296907..297872 + 966 WP_193397199.1 p-hydroxybenzoic acid efflux pump subunit AaeA -
IG609_RS01380 (IG609_001370) 297884..299872 + 1989 WP_193397227.1 p-hydroxybenzoic acid efflux pump subunit AaeB -
IG609_RS01385 (IG609_001375) 300060..300611 - 552 WP_010681569.1 ribosome biogenesis factor YjgA -
IG609_RS01390 (IG609_001380) 300978..302318 + 1341 WP_193397198.1 metalloprotease PmbA -
IG609_RS01395 (IG609_001385) 302420..302830 - 411 WP_014913850.1 nucleoside diphosphate kinase regulator -
IG609_RS01400 (IG609_001390) 303125..303397 - 273 WP_102117079.1 PTS phosphocarrier protein NPr -
IG609_RS01405 (IG609_001395) 303429..304286 - 858 WP_010296630.1 RNase adapter RapZ -
IG609_RS01410 (IG609_001400) 304450..304923 - 474 WP_039279069.1 PTS IIA-like nitrogen regulatory protein PtsN -
IG609_RS01415 (IG609_001405) 305019..305306 - 288 WP_005975449.1 ribosome hibernation promoting factor -
IG609_RS01420 (IG609_001410) 305330..306763 - 1434 WP_193397197.1 RNA polymerase sigma-54 factor VF
IG609_RS01425 (IG609_001415) 306813..307538 - 726 WP_102117081.1 Lipopolysaccharide export system ATP-binding protein LptB VF
IG609_RS01430 (IG609_001420) 307542..308114 - 573 WP_193397196.1 lipopolysaccharide ABC transporter substrate-binding protein LptA -
IG609_RS01435 (IG609_001425) 308095..308661 - 567 WP_193397195.1 LPS export ABC transporter periplasmic protein LptC -
IG609_RS01440 (IG609_001430) 308658..309224 - 567 WP_193397194.1 3-deoxy-manno-octulosonate-8-phosphatase KdsC -
IG609_RS01445 (IG609_001435) 309244..310314 - 1071 WP_193397193.1 Arabinose 5-phosphate isomerase KdsD VF
IG609_RS01450 (IG609_001440) 310389..311345 - 957 WP_193397192.1 calcium/sodium antiporter -
IG609_RS01455 (IG609_001445) 311761..312573 + 813 WP_193397191.1 putative phospholipid import ATP-binding protein MlaF VF
IG609_RS01460 (IG609_001450) 312581..313363 + 783 WP_193397190.1 lipid asymmetry maintenance ABC transporter permease subunit MlaE -
IG609_RS01465 (IG609_001455) 313368..313934 + 567 WP_193397189.1 outer membrane lipid asymmetry maintenance protein MlaD -
IG609_RS01470 (IG609_001460) 313947..314576 + 630 WP_193397188.1 phospholipid-binding protein MlaC -
IG609_RS01475 (IG609_001465) 314590..314880 + 291 WP_193397187.1 lipid asymmetry maintenance protein MlaB -
IG609_RS01480 (IG609_001470) 315015..315269 + 255 WP_010280170.1 BolA family iron metabolism protein IbaG -
IG609_RS01485 (IG609_001475) 315353..316615 + 1263 WP_180786425.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
IG609_RS01490 (IG609_001480) 316722..317819 - 1098 WP_180786424.1 Serine endoprotease DegS VF
IG609_RS01495 (IG609_001485) 318033..319403 - 1371 WP_137740624.1 Periplasmic pH-dependent serine endoprotease DegQ VF
IG609_RS01500 (IG609_001490) 319664..320068 - 405 WP_193397186.1 Z-ring associated protein ZapG -
IG609_RS01505 (IG609_001495) 320290..321441 + 1152 WP_193397226.1 cell division protein ZapE -
IG609_RS01510 (IG609_001500) 321678..322106 + 429 WP_005975488.1 50S ribosomal protein L13 -
IG609_RS01515 (IG609_001505) 322122..322514 + 393 WP_010280182.1 30S ribosomal protein S9 -
IG609_RS01520 (IG609_001510) 322754..323956 + 1203 WP_193401086.1 Putative prophage phiRv2 integrase ; Integrase Integrase
IG609_RS01525 (IG609_001515) 323953..325023 + 1071 WP_193401084.1 PDDEXK nuclease domain-containing protein -
IG609_RS01530 (IG609_001520) 325132..326655 - 1524 WP_226374259.1 hypothetical protein -
IG609_RS01535 (IG609_001525) 327001..328320 + 1320 WP_193401082.1 DUF5623 domain-containing protein -
IG609_RS01540 (IG609_001530) 328402..330717 + 2316 WP_250127229.1 type I restriction enzyme HsdR N-terminal domain-containing protein -
IG609_RS01545 (IG609_001535) 330900..331757 + 858 WP_193401077.1 hypothetical protein -
IG609_RS01550 (IG609_001540) 332017..332661 - 645 WP_226374260.1 carboxymuconolactone decarboxylase family protein -
IG609_RS01555 332804..333067 - 264 WP_226374258.1 hypothetical protein -
IG609_RS01560 (IG609_001550) 333060..334064 - 1005 WP_193401073.1 aldo/keto reductase -
IG609_RS01565 (IG609_001555) 334221..335120 + 900 WP_193401071.1 HTH-type transcriptional regulator PgrR VF
IG609_RS01570 (IG609_001560) 335143..335550 - 408 WP_250127230.1 putative quinol monooxygenase -
IG609_RS01575 (IG609_001565) 335580..335981 - 402 WP_193401069.1 DUF1330 domain-containing protein -
IG609_RS01580 (IG609_001570) 336201..337184 - 984 WP_193401068.1 aldo/keto reductase -
IG609_RS01585 (IG609_001575) 337207..337752 - 546 WP_193401066.1 NAD(P)H-dependent oxidoreductase -
IG609_RS01590 (IG609_001580) 337782..338078 - 297 WP_193401064.1 DUF1330 domain-containing protein -
IG609_RS01595 (IG609_001585) 338075..339064 - 990 WP_193401062.1 2-haloacrylate reductase VF
IG609_RS01600 (IG609_001590) 339124..340281 - 1158 WP_193401060.1 iron-containing alcohol dehydrogenase -
IG609_RS01605 (IG609_001595) 340410..341363 + 954 WP_193401058.1 HTH-type transcriptional regulator DmlR VF
IG609_RS01610 (IG609_001600) 342105..342932 + 828 WP_193401056.1 DUF932 domain-containing protein -
IG609_RS01615 (IG609_001605) 342999..345029 + 2031 WP_193401054.1 ParB N-terminal domain-containing protein -
IG609_RS01620 (IG609_001610) 345330..345791 + 462 WP_193401051.1 DUF6367 family protein -
IG609_RS01625 (IG609_001615) 346586..346900 + 315 WP_193401049.1 DUF736 domain-containing protein -
IG609_RS01630 (IG609_001620) 346958..347248 - 291 WP_193401047.1 helix-turn-helix transcriptional regulator -
IG609_RS01635 (IG609_001625) 347548..347898 + 351 WP_193401045.1 DUF2958 domain-containing protein -
IG609_RS01640 (IG609_001630) 348271..349026 + 756 WP_193401043.1 DUF2285 domain-containing protein -
IG609_RS01645 (IG609_001635) 349152..349448 + 297 WP_193401040.1 helix-turn-helix domain-containing protein -
IG609_RS01650 (IG609_001640) 349475..350341 + 867 WP_193401038.1 replication initiator protein A -
IG609_RS01655 (IG609_001645) 350595..351233 + 639 WP_193401036.1 Chromosome-partitioning ATPase Soj VF
IG609_RS01660 (IG609_001650) 351230..351484 + 255 WP_193401034.1 chromosome partitioning protein ParB -
IG609_RS01665 (IG609_001655) 351490..352023 + 534 WP_193401032.1 DUF2840 domain-containing protein -
IG609_RS01670 (IG609_001660) 352020..352619 + 600 WP_193401030.1 S26 family signal peptidase -
IG609_RS01675 (IG609_001665) 352616..353083 + 468 WP_193401029.1 hypothetical protein -
IG609_RS01680 (IG609_001670) 353080..355038 + 1959 WP_193401027.1 relaxase/mobilization nuclease and DUF3363 domain-containing protein -
IG609_RS01685 (IG609_001675) 355130..355771 - 642 WP_193401025.1 TetR/AcrR family transcriptional regulator -
IG609_RS01690 (IG609_001680) 355918..356727 + 810 WP_193401023.1 glutathione S-transferase family protein -
IG609_RS01695 (IG609_001685) 357034..357978 + 945 WP_193401021.1 HTH-type transcriptional regulator BenM VF
IG609_RS01700 (IG609_001690) 357975..358250 + 276 WP_193401019.1 EexN family lipoprotein -
IG609_RS01705 (IG609_001695) 358471..360486 + 2016 WP_193401017.1 Conjugal transfer protein TraG VF
IG609_RS01710 (IG609_001700) 360483..360947 + 465 WP_193401015.1 ribbon-helix-helix protein, CopG family -
IG609_RS01715 (IG609_001705) 360944..362008 + 1065 WP_193401013.1 Type IV secretion system protein PtlH VF
IG609_RS01720 (IG609_001710) 362005..362382 + 378 WP_193401011.1 TrbC/VirB2 family protein -
IG609_RS01725 (IG609_001715) 362379..362648 + 270 WP_047748479.1 VirB3 family type IV secretion system protein -
IG609_RS01730 (IG609_001720) 362659..365109 + 2451 WP_193401009.1 conjugal transfer protein TrbE -
IG609_RS01735 (IG609_001725) 365106..365834 + 729 WP_193401007.1 P-type conjugative transfer protein TrbJ -
IG609_RS01740 (IG609_001730) 365846..367225 + 1380 WP_193401004.1 P-type conjugative transfer protein TrbL -
IG609_RS01745 (IG609_001735) 367250..367954 + 705 WP_193401002.1 conjugal transfer protein TrbF -
IG609_RS01750 (IG609_001740) 367951..368976 + 1026 WP_193401000.1 P-type conjugative transfer protein TrbG -
IG609_RS01755 (IG609_001745) 368979..370271 + 1293 WP_193400998.1 Type IV secretion system protein virB10 VF
IG609_RS01760 (IG609_001750) 370268..370513 + 246 WP_193400996.1 DUF2274 domain-containing protein -
IG609_RS01765 (IG609_001755) 370829..372157 - 1329 WP_193397185.1 MFS transporter -
IG609_RS01770 (IG609_001760) 372370..373416 - 1047 WP_193397184.1 L-idonate 5-dehydrogenase -
IG609_RS01775 (IG609_001765) 373527..374300 - 774 WP_193397183.1 Gluconate 5-dehydrogenase VF
IG609_RS01780 (IG609_001770) 374481..375185 + 705 WP_010280187.1 FadR/GntR family transcriptional regulator -
IG609_RS01785 (IG609_001775) 375522..376766 + 1245 WP_010280188.1 enolase C-terminal domain-like protein -
IG609_RS01790 (IG609_001780) 377186..377827 + 642 WP_005975503.1 stringent starvation protein SspA -
IG609_RS01795 (IG609_001785) 377833..378336 + 504 WP_193397182.1 ClpXP protease specificity-enhancing factor -
IG609_RS01800 (IG609_001790) 378399..379172 - 774 WP_102117097.1 Diacetyl reductase [(S)-acetoin forming] VF
IG609_RS01805 (IG609_001795) 379430..380848 - 1419 WP_039507277.1 glutamate synthase small subunit -
IG609_RS01810 (IG609_001800) 380858..385318 - 4461 WP_193397181.1 glutamate synthase large subunit -
IG609_RS01815 (IG609_001805) 385970..386899 + 930 WP_102117099.1 TIGR01212 family radical SAM protein -
IG609_RS01820 (IG609_001810) 387019..389388 + 2370 WP_193397180.1 aerobic respiration two-component sensor histidine kinase ArcB -
IG609_RS01825 (IG609_001815) 389907..390560 + 654 WP_193397225.1 isoprenoid biosynthesis glyoxalase ElbB -
IG609_RS01830 (IG609_001820) 390557..391291 + 735 WP_193397179.1 monofunctional biosynthetic peptidoglycan transglycosylase -
IG609_RS01835 (IG609_001825) 391381..392676 + 1296 WP_193397178.1 alginate lyase family protein -
IG609_RS01840 (IG609_001830) 392794..393366 - 573 WP_102117104.1 division/outer membrane stress-associated lipid-binding lipoprotein -
IG609_RS01845 (IG609_001835) 393378..393968 - 591 WP_005975525.1 DnaA initiator-associating protein DiaA VF
IG609_RS01850 (IG609_001840) 394010..394366 - 357 WP_193397224.1 YraN family protein -
IG609_RS01855 (IG609_001845) 394363..396381 - 2019 WP_193397177.1 penicillin-binding protein activator -
IG609_RS01860 (IG609_001850) 396445..397332 + 888 WP_039470360.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
IG609_RS01870 (IG609_001860) 398268..398522 + 255 WP_039282788.1 plasmid stabilization protein Antitoxin Detail
IG609_RS01875 (IG609_001865) 398512..398799 + 288 WP_039282785.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
IG609_RS01880 (IG609_001870) 398976..399761 + 786 WP_039524247.1 4,5-DOPA dioxygenase extradiol -
IG609_RS01885 (IG609_001875) 400021..401181 - 1161 WP_193397176.1 glutathionylspermidine synthase family protein -
IG609_RS01890 (IG609_001880) 401193..401867 - 675 WP_193397175.1 DUF1190 family protein -
IG609_RS01895 (IG609_001885) 402137..403531 - 1395 WP_193397174.1 outer membrane channel protein TolC -
IG609_RS01900 (IG609_001890) 403868..404500 + 633 WP_193397173.1 ADP-ribose diphosphatase -
IG609_RS01905 (IG609_001895) 404505..404936 + 432 WP_039482244.1 DUF1249 family protein -
IG609_RS01910 (IG609_001900) 405044..405871 + 828 WP_193397172.1 3',5'-cyclic-AMP phosphodiesterase -
IG609_RS01915 (IG609_001905) 405871..406452 + 582 WP_193397171.1 esterase YqiA -
IG609_RS01920 (IG609_001910) 406539..408434 + 1896 WP_193400973.1 DNA topoisomerase IV subunit B -
IG609_RS01925 (IG609_001915) 408685..411087 - 2403 WP_193400994.1 TonB-dependent receptor -
IG609_RS01930 (IG609_001920) 411582..413855 + 2274 WP_193400992.1 DNA topoisomerase IV subunit A -
IG609_RS01935 (IG609_001925) 414006..414743 + 738 WP_193400969.1 1-acylglycerol-3-phosphate O-acyltransferase -
IG609_RS01940 (IG609_001930) 414846..416261 + 1416 WP_193400967.1 cell division protein FtsP -
IG609_RS01945 (IG609_001935) 416647..417384 + 738 WP_102117120.1 GntR family transcriptional regulator -
IG609_RS01950 (IG609_001940) 417469..418296 - 828 WP_193400989.1 2,5-didehydrogluconate reductase DkgA -
IG609_RS01955 (IG609_001945) 418886..419404 + 519 WP_116186550.1 Major exported protein VF
IG609_RS01960 (IG609_001950) 419606..421576 + 1971 WP_250127231.1 Actin cross-linking toxin VgrG1 VF
IG609_RS01965 (IG609_001955) 421569..422465 + 897 WP_193397806.1 DUF4123 domain-containing protein -
IG609_RS01970 (IG609_001960) 422477..424087 + 1611 WP_226374044.1 hypothetical protein -
IG609_RS01975 (IG609_001965) 424105..425124 + 1020 WP_193397807.1 hypothetical protein -
IG609_RS01980 (IG609_001970) 425219..426376 + 1158 WP_226374045.1 hypothetical protein -
IG609_RS20445 426683..426817 + 135 WP_264177033.1 hypothetical protein -
IG609_RS01985 (IG609_001975) 426932..428017 + 1086 WP_193397808.1 hypothetical protein -
IG609_RS01990 (IG609_001980) 428034..428180 - 147 WP_193397809.1 hypothetical protein -
IG609_RS01995 (IG609_001985) 428220..428567 + 348 WP_193397810.1 hypothetical protein -
IG609_RS02000 (IG609_001990) 428746..429012 + 267 WP_193397811.1 hypothetical protein VF
IG609_RS02005 (IG609_001995) 429122..430285 - 1164 WP_193397812.1 alcohol dehydrogenase -
IG609_RS02010 (IG609_002000) 430289..431029 - 741 WP_116163570.1 NADPH-dependent oxidoreductase -
IG609_RS02015 (IG609_002005) 431262..432287 + 1026 WP_193397889.1 AraC family transcriptional regulator -
IG609_RS02020 (IG609_002010) 432317..432976 - 660 WP_010297510.1 DedA family protein -
IG609_RS02025 (IG609_002015) 433290..434480 - 1191 WP_116163573.1 cystathionine beta-lyase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance