MGE detailed information
MGE type: Genomic_island MGE length: 22457 bp
Accession: NZ_CP065152 Location: 2475731..2498187 Organism: Escherichia coli O150:H6 strain FEX669 Replicon: chromosome
Accession: NZ_CP065152 Location: 2475731..2498187 Organism: Escherichia coli O150:H6 strain FEX669 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7994_RS11770 () | 2471846..2472271 | - | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
| H7994_RS11775 () | 2472276..2473760 | - | 1485 | WP_196316251.1 | type VI secretion system contractile sheath large subunit | - |
| H7994_RS11780 () | 2473783..2474286 | - | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| H7994_RS11785 () | 2474992..2475510 | + | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| H7994_RS11790 () | 2475731..2477962 | + | 2232 | WP_196316253.1 | Actin cross-linking toxin VgrG1 | VF |
| H7994_RS11795 () | 2477975..2478739 | + | 765 | WP_000633876.1 | DUF4123 domain-containing protein | - |
| H7994_RS11800 () | 2479053..2479298 | + | 246 | WP_196316254.1 | hypothetical protein | - |
| H7994_RS11805 () | 2479285..2479605 | + | 321 | WP_012601314.1 | DUF3304 domain-containing protein | - |
| H7994_RS11810 () | 2479620..2480144 | + | 525 | WP_196316266.1 | hypothetical protein | VF |
| H7994_RS11815 () | 2480129..2482222 | + | 2094 | WP_097520527.1 | hypothetical protein | VF |
| H7994_RS11820 () | 2482498..2483262 | + | 765 | Protein_2297 | ISAs1 family transposase ISEc1 | Transposase |
| H7994_RS11825 () | 2483491..2483994 | + | 504 | WP_000227712.1 | hypothetical protein | - |
| H7994_RS11830 () | 2484088..2484576 | + | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| H7994_RS11835 () | 2484602..2484796 | + | 195 | Protein_2300 | transposase | - |
| H7994_RS11840 () | 2484847..2485617 | - | 771 | WP_001118054.1 | 2-oxoglutaramate amidase | - |
| H7994_RS11845 () | 2485795..2486244 | + | 450 | WP_001296904.1 | Ivy family C-type lysozyme inhibitor | - |
| H7994_RS11850 () | 2486287..2488731 | - | 2445 | WP_000973130.1 | Acyl-coenzyme A dehydrogenase | VF |
| H7994_RS11855 () | 2488971..2489549 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| H7994_RS11860 () | 2489754..2490521 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| H7994_RS11865 () | 2490492..2491232 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| H7994_RS11870 () | 2491544..2492292 | + | 749 | Protein_2307 | C40 family peptidase | - |
| H7994_RS11875 () | 2492468..2492965 | + | 498 | Protein_2308 | REP-associated tyrosine transposase RayT | - |
| H7994_RS11880 () | 2493147..2493305 | - | 159 | WP_157848283.1 | hypothetical protein | - |
| H7994_RS11885 () | 2493384..2495096 | - | 1713 | Protein_2310 | Flagellar biosynthesis protein FlhA | VF |
| H7994_RS11890 () | 2495068..2495853 | + | 786 | WP_061336152.1 | Chemotaxis protein LafU | VF |
| H7994_RS11895 () | 2495924..2496979 | + | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| H7994_RS11900 () | 2497031..2497324 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| H7994_RS11905 () | 2497327..2497725 | + | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| H7994_RS11910 () | 2497735..2498187 | + | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| H7994_RS11915 () | 2498377..2499516 | + | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| H7994_RS11920 () | 2499513..2500127 | + | 615 | WP_000602123.1 | peptide chain release factor H | - |
| H7994_RS11925 () | 2500184..2501641 | - | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| H7994_RS11930 () | 2501902..2502360 | + | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| - () | 2502956..2503036 | + | 81 | NuclAT_4 | - | - |
| - () | 2502956..2503036 | + | 81 | NuclAT_4 | - | - |
| - () | 2502956..2503036 | + | 81 | NuclAT_4 | - | - |
| - () | 2502956..2503036 | + | 81 | NuclAT_4 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|