MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 14486 bp
Accession: NZ_CP065036 Location: 3087381..3101866 Organism: Pectobacterium parmentieri strain PB20 Replicon: chromosome
Accession: NZ_CP065036 Location: 3087381..3101866 Organism: Pectobacterium parmentieri strain PB20 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PB20LOC_RS13985 () | 3082937..3084388 | + | 1452 | WP_015731037.1 | L-asparagine permease | - |
| PB20LOC_RS13990 () | 3084480..3086633 | - | 2154 | WP_014700965.1 | ornithine decarboxylase | - |
| PB20LOC_RS14000 () | 3087548..3088807 | + | 1260 | WP_103808713.1 | hypothetical protein ; Integrase | Integrase |
| PB20LOC_RS14005 () | 3088914..3089108 | - | 195 | WP_103808714.1 | DUF3950 domain-containing protein | - |
| PB20LOC_RS14010 () | 3089294..3089635 | + | 342 | WP_103808715.1 | hypothetical protein | - |
| PB20LOC_RS14015 () | 3090080..3090403 | - | 324 | WP_162940689.1 | hypothetical protein | - |
| PB20LOC_RS14020 () | 3090523..3091266 | + | 744 | WP_103808717.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| PB20LOC_RS14025 () | 3091325..3091543 | + | 219 | WP_012773205.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| PB20LOC_RS14030 () | 3091546..3091851 | + | 306 | WP_103808718.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| PB20LOC_RS14035 () | 3092203..3093933 | + | 1731 | WP_103808719.1 | hypothetical protein | - |
| PB20LOC_RS14040 () | 3094208..3095404 | + | 1197 | WP_103808720.1 | DNA cytosine methyltransferase | - |
| PB20LOC_RS14045 () | 3095498..3098467 | + | 2970 | WP_103808721.1 | ATP-binding protein | - |
| PB20LOC_RS14050 () | 3098460..3100283 | + | 1824 | WP_103808722.1 | hypothetical protein | - |
| PB20LOC_RS14055 () | 3100634..3101133 | - | 500 | Protein_2747 | GNAT family N-acetyltransferase | - |
| PB20LOC_RS14060 () | 3101130..3101423 | - | 294 | WP_103808723.1 | DUF1778 domain-containing protein | - |
| PB20LOC_RS14065 () | 3102071..3102292 | + | 222 | Protein_2749 | integrase | - |
| PB20LOC_RS14070 () | 3102413..3103627 | - | 1215 | WP_103808724.1 | tyrosine-type recombinase/integrase | - |
| PB20LOC_RS14075 () | 3104001..3105320 | + | 1320 | WP_103808725.1 | site-specific integrase | - |
| PB20LOC_RS14080 () | 3105392..3106441 | - | 1050 | WP_103808726.1 | macro domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|