MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 125783 bp
Accession: NZ_CP065030 Location: 1459966..1585748 Organism: Pectobacterium versatile strain F131 Replicon: chromosome
Accession: NZ_CP065030 Location: 1459966..1585748 Organism: Pectobacterium versatile strain F131 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F131LOC_RS06530 () | 1456152..1457150 | + | 999 | WP_103970720.1 | 6-phosphogluconolactonase | - |
| F131LOC_RS06535 () | 1457205..1458455 | - | 1251 | WP_103184353.1 | LVIVD repeat-containing protein | - |
| F131LOC_RS06540 () | 1458470..1459546 | - | 1077 | WP_103970721.1 | sugar ABC transporter substrate-binding protein | - |
| F131LOC_RS06545 () | 1459965..1460600 | - | 636 | WP_103860266.1 | formate dehydrogenase-N subunit gamma | - |
| F131LOC_RS06550 () | 1460593..1461501 | - | 909 | WP_103970722.1 | formate dehydrogenase subunit beta | - |
| F131LOC_RS06555 () | 1461514..1464561 | - | 3048 | WP_103970723.1 | formate dehydrogenase-N subunit alpha | - |
| F131LOC_RS06560 () | 1464843..1466873 | - | 2031 | WP_095701876.1 | methionine--tRNA ligase | - |
| F131LOC_RS06565 () | 1467097..1468206 | + | 1110 | WP_039482652.1 | iron-sulfur cluster carrier protein ApbC | - |
| F131LOC_RS06570 () | 1468515..1469156 | + | 642 | WP_010281304.1 | uridine kinase | - |
| F131LOC_RS06575 () | 1469264..1469845 | + | 582 | WP_039482649.1 | dCTP deaminase | - |
| F131LOC_RS06580 () | 1469909..1471744 | + | 1836 | WP_103970724.1 | outer membrane assembly protein AsmA | - |
| F131LOC_RS06585 () | 1472132..1473484 | + | 1353 | WP_103970725.1 | anaerobic C4-dicarboxylate transporter DcuC | - |
| F131LOC_RS06590 () | 1473562..1473945 | - | 384 | WP_103970735.1 | nucleotidyltransferase domain-containing protein | - |
| F131LOC_RS06595 () | 1473994..1475208 | - | 1215 | WP_103970726.1 | Serine/threonine-protein kinase toxin HipA | VF |
| F131LOC_RS06600 () | 1475205..1475462 | - | 258 | WP_103970736.1 | helix-turn-helix domain-containing protein | - |
| F131LOC_RS06605 () | 1475561..1477147 | - | 1587 | WP_103970727.1 | TerC family protein | - |
| F131LOC_RS06610 () | 1477874..1478971 | + | 1098 | WP_103970728.1 | Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase | VF |
| F131LOC_RS06615 () | 1479089..1480225 | + | 1137 | WP_103970729.1 | hypothetical protein | VF |
| F131LOC_RS06620 () | 1480234..1480668 | + | 435 | WP_103970730.1 | putative low molecular weight protein-tyrosine-phosphatase AmsI | VF |
| F131LOC_RS06625 () | 1480684..1482855 | + | 2172 | WP_103970731.1 | Tyrosine-protein kinase wzc | VF |
| F131LOC_RS06630 () | 1483028..1483294 | + | 267 | WP_196387962.1 | oligosaccharide flippase family protein | - |
| F131LOC_RS06635 () | 1483419..1484114 | + | 696 | WP_196387963.1 | oligosaccharide flippase family protein | - |
| F131LOC_RS06640 () | 1484242..1484646 | + | 405 | WP_196387964.1 | hypothetical protein | VF |
| F131LOC_RS06645 () | 1486551..1487128 | + | 578 | Protein_1287 | Streptogramin A acetyltransferase | VF |
| F131LOC_RS06650 () | 1487138..1487518 | + | 381 | WP_196387965.1 | UDP-Glc:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,3-glucosyltransferase WfgD | VF |
| F131LOC_RS06655 () | 1488117..1488811 | + | 695 | WP_095522144.1 | IS1 family transposase | - |
| F131LOC_RS06660 () | 1489061..1489480 | + | 420 | WP_196387966.1 | glycosyltransferase | - |
| F131LOC_RS06665 () | 1489480..1489923 | + | 444 | WP_196387984.1 | glycosyltransferase | - |
| F131LOC_RS06670 () | 1489942..1491051 | + | 1110 | Protein_1292 | glycosyltransferase family 4 protein | - |
| F131LOC_RS06675 () | 1491085..1492094 | + | 1010 | Protein_1293 | dTDP-glucose 4,6-dehydratase 2 | VF |
| F131LOC_RS06680 () | 1492151..1493314 | + | 1164 | Protein_1294 | UDP-glucose 6-dehydrogenase | VF |
| F131LOC_RS06685 () | 1493360..1494211 | - | 852 | WP_103972203.1 | dTDP-4-dehydrorhamnose reductase | - |
| F131LOC_RS06690 () | 1494208..1494744 | - | 537 | WP_103972204.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | VF |
| F131LOC_RS06695 () | 1494746..1495615 | - | 870 | WP_103972228.1 | Glucose-1-phosphate thymidylyltransferase 2 | VF |
| F131LOC_RS06700 () | 1495799..1496059 | + | 261 | WP_103972205.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| F131LOC_RS06705 () | 1496063..1496341 | + | 279 | WP_103972206.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| F131LOC_RS06710 () | 1496574..1497470 | + | 897 | WP_039482588.1 | UTP--glucose-1-phosphate uridylyltransferase | VF |
| F131LOC_RS06715 () | 1497526..1497726 | - | 201 | WP_103972229.1 | hypothetical protein | - |
| F131LOC_RS06720 () | 1497867..1498484 | - | 618 | WP_103972207.1 | plasmid pRiA4b ORF-3 family protein | - |
| F131LOC_RS06725 () | 1498731..1500137 | + | 1407 | WP_039492568.1 | 6-phosphogluconate dehydrogenase, decarboxylating | VF |
| F131LOC_RS06730 () | 1500604..1500897 | + | 294 | WP_010296810.1 | hypothetical protein | - |
| F131LOC_RS06735 () | 1500973..1501650 | + | 678 | WP_165791259.1 | YjbF family lipoprotein | - |
| F131LOC_RS06740 () | 1501660..1502442 | + | 783 | WP_044203338.1 | capsule biosynthesis GfcC family protein | - |
| F131LOC_RS06745 () | 1502439..1504562 | + | 2124 | WP_103972208.1 | YjbH domain-containing protein | - |
| F131LOC_RS06750 () | 1504955..1505512 | + | 558 | WP_040031358.1 | chorismate mutase | - |
| F131LOC_RS06755 () | 1505532..1507160 | + | 1629 | WP_103972209.1 | S53 family peptidase | - |
| F131LOC_RS06760 () | 1507484..1508908 | + | 1425 | WP_103972210.1 | glycoside hydrolase family 1 protein | - |
| F131LOC_RS06765 () | 1509019..1509855 | + | 837 | WP_103972211.1 | PRD domain-containing protein | - |
| F131LOC_RS06770 () | 1510089..1511150 | + | 1062 | WP_103860296.1 | diguanylate cyclase AdrA | - |
| F131LOC_RS06775 () | 1511267..1512370 | - | 1104 | WP_103972212.1 | extracellular solute-binding protein | - |
| F131LOC_RS06780 () | 1512699..1513004 | - | 306 | WP_044203320.1 | antibiotic biosynthesis monooxygenase | - |
| F131LOC_RS06785 () | 1513052..1513909 | - | 858 | WP_010281425.1 | MurR/RpiR family transcriptional regulator | - |
| F131LOC_RS06790 () | 1514237..1515748 | + | 1512 | WP_103160071.1 | CoA-acylating methylmalonate-semialdehyde dehydrogenase | - |
| F131LOC_RS06795 () | 1515935..1517866 | + | 1932 | WP_103972213.1 | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | - |
| F131LOC_RS06800 () | 1518080..1518292 | - | 213 | WP_196387967.1 | hypothetical protein | - |
| F131LOC_RS06805 () | 1518593..1519579 | + | 987 | WP_103972214.1 | inositol 2-dehydrogenase | - |
| F131LOC_RS06810 () | 1519660..1520598 | + | 939 | WP_102116574.1 | substrate-binding domain-containing protein | - |
| F131LOC_RS06815 () | 1520665..1522212 | + | 1548 | WP_103972215.1 | sugar ABC transporter ATP-binding protein | - |
| F131LOC_RS06820 () | 1522225..1523256 | + | 1032 | WP_010281439.1 | ABC transporter permease | - |
| F131LOC_RS06825 () | 1523297..1524430 | + | 1134 | WP_103972216.1 | Gfo/Idh/MocA family oxidoreductase | - |
| F131LOC_RS06830 () | 1524626..1526530 | + | 1905 | WP_039506680.1 | 5-dehydro-2-deoxygluconokinase | - |
| F131LOC_RS06835 () | 1526759..1527649 | + | 891 | WP_103972217.1 | myo-inosose-2 dehydratase | - |
| F131LOC_RS06840 () | 1527737..1528573 | + | 837 | WP_103972218.1 | 5-deoxy-glucuronate isomerase | - |
| F131LOC_RS06845 () | 1528681..1529001 | - | 321 | WP_103972219.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| F131LOC_RS06850 () | 1529001..1529279 | - | 279 | WP_010304717.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| F131LOC_RS06855 () | 1529357..1530046 | - | 690 | WP_103972220.1 | Fe(3+) ions import ATP-binding protein FbpC 2 | VF |
| F131LOC_RS06860 () | 1530068..1531765 | - | 1698 | WP_103972221.1 | iron ABC transporter permease | - |
| F131LOC_RS06865 () | 1531749..1532798 | - | 1050 | WP_103941537.1 | Fe(3+) ABC transporter substrate-binding protein | - |
| F131LOC_RS06870 () | 1533033..1533872 | - | 840 | WP_103972222.1 | PRD domain-containing protein | - |
| F131LOC_RS06875 () | 1533967..1535430 | - | 1464 | WP_103972223.1 | family 1 glycosylhydrolase | - |
| F131LOC_RS06880 () | 1535430..1537295 | - | 1866 | WP_103972224.1 | beta-glucoside-specific PTS transporter subunit IIABC | - |
| F131LOC_RS06885 () | 1537734..1538798 | + | 1065 | WP_103972225.1 | sensor domain-containing diguanylate cyclase | - |
| F131LOC_RS06890 () | 1538984..1539322 | - | 339 | WP_103972226.1 | DUF1869 domain-containing protein | - |
| F131LOC_RS06895 () | 1539333..1539665 | - | 333 | WP_103972227.1 | DUF1971 domain-containing protein | - |
| F131LOC_RS06900 () | 1540047..1540637 | + | 591 | WP_039473696.1 | flavin reductase family protein | - |
| F131LOC_RS06905 () | 1540843..1541332 | - | 490 | Protein_1339 | LysR family transcriptional regulator | - |
| F131LOC_RS06910 () | 1541348..1541914 | - | 567 | WP_103941524.1 | TetR/AcrR family transcriptional regulator | - |
| F131LOC_RS06915 () | 1542052..1543143 | + | 1092 | WP_103941522.1 | alkene reductase | - |
| F131LOC_RS06920 () | 1543219..1544001 | + | 783 | WP_040031375.1 | putative oxidoreductase | VF |
| F131LOC_RS06925 () | 1544096..1544914 | + | 819 | WP_103941520.1 | putative oxidoreductase | VF |
| F131LOC_RS06930 () | 1544922..1545942 | + | 1021 | Protein_1344 | Zinc-type alcohol dehydrogenase-like protein | VF |
| F131LOC_RS06935 () | 1547417..1548033 | + | 617 | Protein_1345 | TIR domain-containing protein | - |
| F131LOC_RS06940 () | 1548075..1548590 | + | 516 | WP_196387968.1 | TIR domain-containing protein | - |
| F131LOC_RS06945 () | 1548592..1549696 | + | 1105 | Protein_1347 | toll/interleukin-1 receptor domain-containing protein | - |
| F131LOC_RS06950 () | 1549756..1550930 | + | 1175 | Protein_1348 | IS3 family transposase ISSlo2 | Transposase |
| F131LOC_RS06955 () | 1551041..1551857 | + | 817 | Protein_1349 | hypothetical protein | - |
| F131LOC_RS06960 () | 1552470..1553309 | - | 840 | WP_196387985.1 | ATP-binding protein | - |
| F131LOC_RS06965 () | 1553455..1553697 | - | 243 | WP_196387994.1 | hypothetical protein | - |
| F131LOC_RS06970 () | 1553640..1553885 | - | 246 | WP_196387969.1 | AAA family ATPase | - |
| F131LOC_RS06975 () | 1554227..1554887 | - | 661 | Protein_1353 | hypothetical protein | - |
| F131LOC_RS06980 () | 1554881..1555374 | - | 494 | Protein_1354 | TIR domain-containing protein | - |
| F131LOC_RS06985 () | 1555396..1556425 | - | 1030 | Protein_1355 | hypothetical protein | - |
| F131LOC_RS06990 () | 1556415..1556970 | - | 556 | Protein_1356 | adenylate kinase | - |
| F131LOC_RS06995 () | 1557050..1558050 | - | 1001 | Protein_1357 | thymidylate synthase | - |
| F131LOC_RS07000 () | 1558962..1559909 | + | 948 | WP_103972477.1 | DUF1738 domain-containing protein | - |
| F131LOC_RS07005 () | 1560104..1560850 | - | 747 | WP_098363225.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| F131LOC_RS07010 () | 1560860..1562719 | - | 1860 | WP_103972481.1 | TraM recognition domain-containing protein | - |
| F131LOC_RS07015 () | 1563466..1563771 | - | 306 | WP_103972476.1 | hypothetical protein | - |
| F131LOC_RS07020 () | 1563790..1564092 | - | 303 | WP_103972475.1 | conjugal transfer protein | - |
| F131LOC_RS07025 () | 1564142..1565170 | - | 1029 | WP_103972474.1 | Type IV secretion system protein VirB11 | VF |
| F131LOC_RS07030 () | 1565160..1566464 | - | 1305 | WP_049205012.1 | Type IV secretion system protein virB10 | VF |
| F131LOC_RS07035 () | 1566461..1567348 | - | 888 | WP_103972473.1 | Type IV secretion system protein virB9 | VF |
| F131LOC_RS07040 () | 1567348..1568031 | - | 684 | WP_103972472.1 | Type IV secretion system protein PtlE | VF |
| F131LOC_RS07045 () | 1568030..1568224 | + | 195 | WP_196387970.1 | hypothetical protein | - |
| F131LOC_RS07050 () | 1568254..1569285 | - | 1032 | WP_103972471.1 | type IV secretion system protein | - |
| F131LOC_RS07055 () | 1569359..1569634 | - | 276 | WP_103972470.1 | EexN family lipoprotein | - |
| F131LOC_RS07060 () | 1569645..1570364 | - | 720 | WP_103972480.1 | type IV secretion system protein | - |
| F131LOC_RS07065 () | 1570388..1573135 | - | 2748 | WP_103972469.1 | Type IV secretion system protein virB4 | VF |
| F131LOC_RS07070 () | 1573147..1573425 | - | 279 | WP_095101420.1 | hypothetical protein | VF |
| F131LOC_RS07075 () | 1573406..1574071 | - | 666 | WP_103972468.1 | Type IV secretion system protein virB1 | VF |
| F131LOC_RS07080 () | 1574150..1574371 | - | 222 | WP_103826093.1 | hypothetical protein | - |
| F131LOC_RS07085 () | 1574767..1574976 | - | 210 | WP_033783515.1 | TraR/DksA family transcriptional regulator | - |
| F131LOC_RS07090 () | 1574966..1575553 | - | 588 | WP_103972467.1 | DUF2857 domain-containing protein | - |
| F131LOC_RS07095 () | 1575568..1575762 | - | 195 | WP_009635172.1 | AlpA family transcriptional regulator | - |
| F131LOC_RS07100 () | 1575901..1576827 | - | 927 | WP_196387971.1 | hypothetical protein | - |
| F131LOC_RS07105 () | 1577330..1577989 | - | 660 | WP_103972096.1 | DsbA family protein | - |
| F131LOC_RS07110 () | 1578070..1578687 | - | 618 | WP_103972097.1 | NAD(P)H-dependent oxidoreductase | - |
| F131LOC_RS07115 () | 1578801..1579190 | + | 390 | WP_103972098.1 | helix-turn-helix transcriptional regulator | - |
| F131LOC_RS07120 () | 1579765..1581345 | - | 1581 | WP_103972099.1 | amidase | - |
| F131LOC_RS07125 () | 1581666..1582430 | + | 765 | WP_103972100.1 | HTH-type transcriptional regulator MalT | VF |
| F131LOC_RS07130 () | 1582691..1583563 | + | 873 | WP_103972101.1 | arginase family protein | - |
| F131LOC_RS07135 () | 1583642..1584838 | - | 1197 | WP_103972102.1 | MFS transporter | - |
| F131LOC_RS07140 () | 1585158..1586051 | + | 894 | WP_103972103.1 | LysR family transcriptional regulator | - |
| F131LOC_RS07145 () | 1586218..1586382 | + | 165 | WP_108723601.1 | hypothetical protein | - |
| F131LOC_RS07150 () | 1586544..1587812 | - | 1269 | WP_020439329.1 | integrase arm-type DNA-binding domain-containing protein | - |
| F131LOC_RS07160 () | 1588192..1589454 | - | 1263 | WP_103972104.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|