MGE detailed information
MGE type: Genomic_island MGE length: 40426 bp
Accession: NZ_CP064674 Location: 3592571..3632996 Organism: Salmonella sp. SJTUF14076 Replicon: chromosome
Accession: NZ_CP064674 Location: 3592571..3632996 Organism: Salmonella sp. SJTUF14076 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HU143_RS17470 () | 3588142..3590586 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| HU143_RS17475 () | 3590695..3591462 | + | 768 | WP_023226791.1 | amidohydrolase | - |
| HU143_RS17480 () | 3591833..3592240 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| HU143_RS17485 () | 3592571..3593290 | + | 720 | WP_023226792.1 | adhesin/invasin protein PagN | - |
| HU143_RS17490 () | 3593294..3593482 | - | 189 | WP_031603649.1 | hypothetical protein | - |
| HU143_RS17495 () | 3593518..3593651 | + | 134 | Protein_3423 | transposase | - |
| HU143_RS17500 () | 3594253..3594870 | - | 618 | WP_023226793.1 | hypothetical protein | - |
| HU143_RS17505 () | 3595010..3595465 | - | 456 | WP_000141547.1 | Lrp/AsnC family transcriptional regulator | - |
| HU143_RS17510 () | 3595598..3596656 | - | 1059 | WP_023226794.1 | fimbrial protein TcfD | - |
| HU143_RS17515 () | 3596679..3599366 | - | 2688 | WP_023226795.1 | fimbrial outer membrane usher protein TcfC | - |
| HU143_RS17520 () | 3599475..3600050 | - | 576 | WP_000287810.1 | fimbrial protein TcfB | - |
| HU143_RS17525 () | 3600101..3600811 | - | 711 | WP_001009507.1 | fimbrial chaperone TcfA | - |
| HU143_RS17530 () | 3600937..3601634 | + | 698 | Protein_3430 | IS1 family transposase | - |
| HU143_RS17535 () | 3602051..3602521 | - | 471 | WP_000266939.1 | pilin structural protein SafD | - |
| HU143_RS17540 () | 3602543..3605053 | - | 2511 | WP_053505593.1 | fimbrial biogenesis outer membrane usher protein | - |
| HU143_RS17545 () | 3605077..3605817 | - | 741 | WP_051129375.1 | pili assembly chaperone SafB | - |
| HU143_RS17550 () | 3605892..3606389 | - | 498 | WP_051129374.1 | Saf-pilin pilus formation protein SafA | - |
| HU143_RS17555 () | 3606522..3607016 | - | 495 | WP_051129373.1 | hypothetical protein | - |
| HU143_RS17560 () | 3607784..3608485 | - | 702 | Protein_3436 | IS481 family transposase | - |
| - () | 3608565..3608790 | - | 226 | - | - | Antitoxin Detail |
| HU143_RS17565 () | 3608573..3608800 | + | 228 | WP_051129376.1 | SymE family type I addiction module toxin | Toxin Detail |
| HU143_RS17570 () | 3608846..3609310 | - | 465 | WP_127201574.1 | hypothetical protein | - |
| HU143_RS17575 () | 3609691..3610536 | - | 846 | Protein_3439 | RHS repeat protein | - |
| HU143_RS17580 () | 3610556..3610693 | + | 138 | WP_023227287.1 | hypothetical protein | - |
| HU143_RS17585 () | 3610836..3611444 | - | 609 | WP_053505599.1 | hypothetical protein | - |
| HU143_RS17590 () | 3611817..3615569 | - | 3753 | Protein_3442 | PAAR domain-containing protein | - |
| HU143_RS17595 () | 3615588..3616034 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
| HU143_RS17600 () | 3616058..3618247 | - | 2190 | WP_023227778.1 | type VI secretion system Vgr family protein | - |
| HU143_RS17605 () | 3618644..3619165 | - | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| HU143_RS17610 () | 3619189..3619605 | - | 417 | WP_023227777.1 | DUF2195 family protein | - |
| HU143_RS17615 () | 3619602..3619696 | - | 95 | Protein_3447 | cytoplasmic protein | - |
| HU143_RS17620 () | 3619732..3620193 | - | 462 | WP_001668725.1 | hypothetical protein | - |
| HU143_RS17625 () | 3620178..3620648 | - | 471 | WP_023227776.1 | glucosaminidase domain-containing protein | - |
| HU143_RS17630 () | 3620691..3621458 | - | 768 | WP_001254127.1 | DUF2094 domain-containing protein | - |
| HU143_RS17635 () | 3621458..3625327 | - | 3870 | WP_023227775.1 | type VI secretion system membrane subunit TssM | - |
| HU143_RS17640 () | 3625361..3625792 | - | 432 | WP_023166851.1 | putative Shiga-like toxin A subunit | - |
| HU143_RS17645 () | 3625994..3626767 | - | 774 | WP_023227774.1 | hypothetical protein | - |
| HU143_RS17650 () | 3626772..3628076 | - | 1305 | WP_000132483.1 | type VI secretion system protein TssL, long form | - |
| HU143_RS17655 () | 3628073..3629416 | - | 1344 | WP_023227773.1 | type VI secretion system baseplate subunit TssK | - |
| HU143_RS17660 () | 3629420..3629956 | - | 537 | WP_023227772.1 | type VI secretion system lipoprotein TssJ | - |
| HU143_RS17665 () | 3630023..3630508 | - | 486 | WP_000119443.1 | type VI secretion system tube protein Hcp | - |
| HU143_RS17670 () | 3630651..3631034 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| HU143_RS17675 () | 3631019..3631504 | - | 486 | WP_001081544.1 | type VI secretion system amidase effector protein Tae4 | - |
| HU143_RS17680 () | 3631634..3631789 | - | 156 | WP_072162161.1 | type VI secretion lipoprotein/VasD | - |
| HU143_RS17685 () | 3631809..3632294 | - | 486 | WP_000312802.1 | type VI secretion system tube protein Hcp | - |
| HU143_RS17690 () | 3632550..3632882 | - | 333 | WP_077907151.1 | hypothetical protein | - |
| HU143_RS17695 () | 3633009..3633116 | - | 108 | Protein_3463 | BPSL0067 family protein | - |
| HU143_RS17700 () | 3633182..3634690 | - | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| HU143_RS17705 () | 3634714..3635259 | - | 546 | WP_023227770.1 | type VI secretion system contractile sheath small subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|