MGE detailed information
MGE type: Genomic_island MGE length: 44657 bp
Accession: NZ_CP064663 Location: 3635210..3679866 Organism: Salmonella sp. SJTUF14170 Replicon: chromosome
Accession: NZ_CP064663 Location: 3635210..3679866 Organism: Salmonella sp. SJTUF14170 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IVP17_RS17780 () | 3630782..3633226 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| IVP17_RS17785 () | 3633335..3634102 | + | 768 | WP_023226791.1 | amidohydrolase | - |
| IVP17_RS17790 () | 3634472..3634879 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| IVP17_RS17795 () | 3635210..3635929 | + | 720 | WP_023226792.1 | Outer membrane protein PagN | VF |
| IVP17_RS17800 () | 3635933..3636121 | - | 189 | WP_031603649.1 | hypothetical protein | - |
| IVP17_RS17805 () | 3636157..3636290 | + | 134 | Protein_3484 | transposase | - |
| IVP17_RS17810 () | 3636892..3637509 | - | 618 | WP_023226793.1 | hypothetical protein | - |
| IVP17_RS17815 () | 3637649..3638104 | - | 456 | WP_000141547.1 | Lrp/AsnC family transcriptional regulator | - |
| IVP17_RS17820 () | 3638237..3639295 | - | 1059 | WP_023226794.1 | fimbrial protein TcfD | - |
| IVP17_RS17825 () | 3639318..3642005 | - | 2688 | WP_023226795.1 | hypothetical protein | VF |
| IVP17_RS17830 () | 3642114..3642689 | - | 576 | WP_000287810.1 | CFA/I fimbrial subunit B | VF |
| IVP17_RS17835 () | 3642740..3643450 | - | 711 | WP_001009507.1 | hypothetical protein | VF |
| IVP17_RS17840 () | 3644358..3645041 | + | 684 | Protein_3491 | IS21 family transposase ISEc62 | Transposase |
| IVP17_RS17845 () | 3645106..3645267 | - | 162 | Protein_3492 | IS3 family transposase IS1351 | Transposase |
| IVP17_RS17850 () | 3645342..3645467 | - | 126 | WP_001537061.1 | hypothetical protein | - |
| IVP17_RS17855 () | 3645587..3646534 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| IVP17_RS17860 () | 3647028..3647268 | - | 241 | Protein_3495 | PerC family transcriptional regulator | - |
| IVP17_RS17865 () | 3647351..3648172 | - | 822 | WP_023209688.1 | polysaccharide deacetylase family protein | - |
| IVP17_RS17870 () | 3648580..3649050 | - | 471 | WP_000266939.1 | pilin structural protein SafD | - |
| IVP17_RS17875 () | 3649072..3651582 | - | 2511 | WP_064163158.1 | F1 capsule-anchoring protein | VF |
| IVP17_RS17880 () | 3651606..3652346 | - | 741 | WP_051129375.1 | Chaperone protein caf1M | VF |
| IVP17_RS17885 () | 3652421..3652918 | - | 498 | WP_064163159.1 | Saf-pilin pilus formation protein SafA | - |
| IVP17_RS17890 () | 3653051..3653545 | - | 495 | WP_051129373.1 | hypothetical protein | - |
| IVP17_RS17895 () | 3654322..3655023 | - | 702 | Protein_3502 | IS481 family transposase | - |
| - () | 3655103..3655328 | - | 226 | - | - | Antitoxin Detail |
| IVP17_RS17900 () | 3655111..3655338 | + | 228 | WP_051129376.1 | SymE family type I addiction module toxin | Toxin Detail |
| IVP17_RS17905 () | 3655384..3655848 | - | 465 | WP_127201574.1 | hypothetical protein | - |
| IVP17_RS17910 () | 3656229..3657074 | - | 846 | Protein_3505 | Putative deoxyribonuclease RhsC | VF |
| IVP17_RS17915 () | 3657094..3657231 | + | 138 | WP_023227287.1 | hypothetical protein | - |
| IVP17_RS17920 () | 3657374..3657982 | - | 609 | WP_053505599.1 | hypothetical protein | - |
| IVP17_RS17925 () | 3658355..3662107 | - | 3753 | Protein_3508 | PAAR domain-containing protein | - |
| IVP17_RS17930 () | 3662126..3662572 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
| IVP17_RS17935 () | 3662596..3664785 | - | 2190 | WP_023181843.1 | Actin cross-linking toxin VgrG1 | VF |
| IVP17_RS17940 () | 3665182..3665703 | - | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| IVP17_RS17945 () | 3665727..3666143 | - | 417 | WP_023227777.1 | DUF2195 family protein | - |
| IVP17_RS17950 () | 3666140..3666234 | - | 95 | Protein_3513 | cytoplasmic protein | - |
| IVP17_RS17955 () | 3666270..3666731 | - | 462 | WP_001668725.1 | hypothetical protein | - |
| IVP17_RS17960 () | 3666716..3667186 | - | 471 | WP_023227776.1 | glucosaminidase domain-containing protein | - |
| IVP17_RS17965 () | 3667229..3667996 | - | 768 | WP_001254127.1 | DUF2094 domain-containing protein | - |
| IVP17_RS17970 () | 3667996..3671865 | - | 3870 | WP_023202542.1 | hypothetical protein | VF |
| IVP17_RS17975 () | 3671899..3672330 | - | 432 | WP_011233132.1 | hypothetical protein | - |
| IVP17_RS17980 () | 3672532..3673305 | - | 774 | WP_064163142.1 | hypothetical protein | - |
| IVP17_RS17985 () | 3673310..3674614 | - | 1305 | WP_000132483.1 | Outer membrane porin F | VF |
| IVP17_RS17990 () | 3674611..3675954 | - | 1344 | WP_000118732.1 | hypothetical protein | VF |
| IVP17_RS17995 () | 3675958..3676494 | - | 537 | WP_064163144.1 | hypothetical protein | VF |
| IVP17_RS18000 () | 3676561..3677046 | - | 486 | WP_079978327.1 | Protein hcp1 | VF |
| IVP17_RS18005 () | 3677189..3677572 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| IVP17_RS18010 () | 3677557..3678042 | - | 486 | WP_064163507.1 | type VI secretion system amidase effector protein Tae4 | - |
| IVP17_RS18015 () | 3678172..3678326 | - | 155 | Protein_3526 | type VI secretion lipoprotein/VasD | - |
| IVP17_RS18020 () | 3678346..3678831 | - | 486 | WP_000312802.1 | Protein hcp1 | VF |
| IVP17_RS18025 () | 3679068..3679493 | - | 426 | WP_064163485.1 | hypothetical protein | - |
| IVP17_RS18030 () | 3679465..3679866 | - | 402 | WP_001147173.1 | BPSL0067 family protein | - |
| IVP17_RS18035 () | 3679919..3681427 | - | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| IVP17_RS18040 () | 3681451..3681993 | - | 543 | WP_000996815.1 | type VI secretion system contractile sheath small subunit | - |
| IVP17_RS18045 () | 3682093..3684732 | - | 2640 | WP_064163482.1 | type VI secretion system ATPase TssH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|