MGE detailed information
MGE type: Genomic_island MGE length: 44657 bp
Accession: NZ_CP064661 Location: 3635271..3679927 Organism: Salmonella sp. SJTUF14178 Replicon: chromosome
Accession: NZ_CP064661 Location: 3635271..3679927 Organism: Salmonella sp. SJTUF14178 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IVP18_RS17775 () | 3630843..3633287 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| IVP18_RS17780 () | 3633396..3634163 | + | 768 | WP_023226791.1 | amidohydrolase | - |
| IVP18_RS17785 () | 3634533..3634940 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| IVP18_RS17790 () | 3635271..3635990 | + | 720 | WP_023226792.1 | Outer membrane protein PagN | VF |
| IVP18_RS17795 () | 3635994..3636182 | - | 189 | WP_031603649.1 | hypothetical protein | - |
| IVP18_RS17800 () | 3636218..3636351 | + | 134 | Protein_3483 | transposase | - |
| IVP18_RS17805 () | 3636953..3637570 | - | 618 | WP_023226793.1 | hypothetical protein | - |
| IVP18_RS17810 () | 3637710..3638165 | - | 456 | WP_000141547.1 | Lrp/AsnC family transcriptional regulator | - |
| IVP18_RS17815 () | 3638298..3639356 | - | 1059 | WP_023226794.1 | fimbrial protein TcfD | - |
| IVP18_RS17820 () | 3639379..3642066 | - | 2688 | WP_023226795.1 | hypothetical protein | VF |
| IVP18_RS17825 () | 3642175..3642750 | - | 576 | WP_000287810.1 | CFA/I fimbrial subunit B | VF |
| IVP18_RS17830 () | 3642801..3643511 | - | 711 | WP_001009507.1 | hypothetical protein | VF |
| IVP18_RS17835 () | 3644419..3645102 | + | 684 | Protein_3490 | IS21 family transposase ISEc62 | Transposase |
| IVP18_RS17840 () | 3645167..3645328 | - | 162 | Protein_3491 | IS3 family transposase IS1351 | Transposase |
| IVP18_RS17845 () | 3645403..3645528 | - | 126 | WP_001537061.1 | hypothetical protein | - |
| IVP18_RS17850 () | 3645648..3646595 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| IVP18_RS17855 () | 3647089..3647329 | - | 241 | Protein_3494 | PerC family transcriptional regulator | - |
| IVP18_RS17860 () | 3647412..3648233 | - | 822 | WP_023209688.1 | polysaccharide deacetylase family protein | - |
| IVP18_RS17865 () | 3648641..3649111 | - | 471 | WP_000266939.1 | pilin structural protein SafD | - |
| IVP18_RS17870 () | 3649133..3651643 | - | 2511 | WP_064163158.1 | F1 capsule-anchoring protein | VF |
| IVP18_RS17875 () | 3651667..3652407 | - | 741 | WP_051129375.1 | Chaperone protein caf1M | VF |
| IVP18_RS17880 () | 3652482..3652979 | - | 498 | WP_064163159.1 | Saf-pilin pilus formation protein SafA | - |
| IVP18_RS17885 () | 3653112..3653606 | - | 495 | WP_051129373.1 | hypothetical protein | - |
| IVP18_RS17890 () | 3654383..3655084 | - | 702 | Protein_3501 | IS481 family transposase | - |
| - () | 3655164..3655389 | - | 226 | - | - | Antitoxin Detail |
| IVP18_RS17895 () | 3655172..3655399 | + | 228 | WP_051129376.1 | SymE family type I addiction module toxin | Toxin Detail |
| IVP18_RS17900 () | 3655445..3655909 | - | 465 | WP_127201574.1 | hypothetical protein | - |
| IVP18_RS17905 () | 3656290..3657135 | - | 846 | Protein_3504 | Putative deoxyribonuclease RhsC | VF |
| IVP18_RS17910 () | 3657155..3657292 | + | 138 | WP_023227287.1 | hypothetical protein | - |
| IVP18_RS17915 () | 3657435..3658043 | - | 609 | WP_053505599.1 | hypothetical protein | - |
| IVP18_RS17920 () | 3658416..3662168 | - | 3753 | Protein_3507 | PAAR domain-containing protein | - |
| IVP18_RS17925 () | 3662187..3662633 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
| IVP18_RS17930 () | 3662657..3664846 | - | 2190 | WP_023181843.1 | Actin cross-linking toxin VgrG1 | VF |
| IVP18_RS17935 () | 3665243..3665764 | - | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| IVP18_RS17940 () | 3665788..3666204 | - | 417 | WP_023227777.1 | DUF2195 family protein | - |
| IVP18_RS17945 () | 3666201..3666295 | - | 95 | Protein_3512 | cytoplasmic protein | - |
| IVP18_RS17950 () | 3666331..3666792 | - | 462 | WP_001668725.1 | hypothetical protein | - |
| IVP18_RS17955 () | 3666777..3667247 | - | 471 | WP_023227776.1 | glucosaminidase domain-containing protein | - |
| IVP18_RS17960 () | 3667290..3668057 | - | 768 | WP_001254127.1 | DUF2094 domain-containing protein | - |
| IVP18_RS17965 () | 3668057..3671926 | - | 3870 | WP_023202542.1 | hypothetical protein | VF |
| IVP18_RS17970 () | 3671960..3672391 | - | 432 | WP_011233132.1 | hypothetical protein | - |
| IVP18_RS17975 () | 3672593..3673366 | - | 774 | WP_064163142.1 | hypothetical protein | - |
| IVP18_RS17980 () | 3673371..3674675 | - | 1305 | WP_000132483.1 | Outer membrane porin F | VF |
| IVP18_RS17985 () | 3674672..3676015 | - | 1344 | WP_000118732.1 | hypothetical protein | VF |
| IVP18_RS17990 () | 3676019..3676555 | - | 537 | WP_064163144.1 | hypothetical protein | VF |
| IVP18_RS17995 () | 3676622..3677107 | - | 486 | WP_079978327.1 | Protein hcp1 | VF |
| IVP18_RS18000 () | 3677250..3677633 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| IVP18_RS18005 () | 3677618..3678103 | - | 486 | WP_064163507.1 | type VI secretion system amidase effector protein Tae4 | - |
| IVP18_RS18010 () | 3678233..3678387 | - | 155 | Protein_3525 | type VI secretion lipoprotein/VasD | - |
| IVP18_RS18015 () | 3678407..3678892 | - | 486 | WP_000312802.1 | Protein hcp1 | VF |
| IVP18_RS18020 () | 3679129..3679554 | - | 426 | WP_064163485.1 | hypothetical protein | - |
| IVP18_RS18025 () | 3679526..3679927 | - | 402 | WP_001147173.1 | BPSL0067 family protein | - |
| IVP18_RS18030 () | 3679980..3681488 | - | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| IVP18_RS18035 () | 3681512..3682054 | - | 543 | WP_000996815.1 | type VI secretion system contractile sheath small subunit | - |
| IVP18_RS18040 () | 3682154..3684793 | - | 2640 | WP_064163482.1 | type VI secretion system ATPase TssH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|