MGE detailed information
MGE type: Prophage MGE length: 48999 bp
Accession: NZ_CP064389 Location: 2543604..2592602 Organism: Staphylococcus aureus strain PartE-Saureus-RM8376 Replicon: chromosome
Accession: NZ_CP064389 Location: 2543604..2592602 Organism: Staphylococcus aureus strain PartE-Saureus-RM8376 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUJ40_RS12950 (2538702) | 2538702..2539034 | - | 333 | WP_000731878.1 | glycine cleavage system protein H | - |
| IUJ40_RS12955 (2539068) | 2539068..2540069 | - | 1002 | WP_000240058.1 | LLM class flavin-dependent oxidoreductase | - |
| IUJ40_RS12960 (2540183) | 2540183..2540275 | - | 93 | WP_001801779.1 | hypothetical protein | - |
| IUJ40_RS12965 (2540371) | 2540371..2541570 | + | 1200 | WP_000286484.1 | NADH-dependent flavin oxidoreductase | - |
| IUJ40_RS12970 (2541643) | 2541643..2542470 | + | 828 | WP_023487106.1 | alpha/beta hydrolase | - |
| IUJ40_RS15175 (2542712) | 2542712..2542834 | - | 123 | WP_000346420.1 | hypothetical protein | - |
| IUJ40_RS12975 (2543604) | 2543604..2545058 | - | 1455 | WP_140045529.1 | N-acetylmuramoyl-L-alanine amidase | - |
| IUJ40_RS12980 (2545070) | 2545070..2545372 | - | 303 | WP_000339142.1 | phage holin | - |
| IUJ40_RS12985 (2545508) | 2545508..2545807 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| IUJ40_RS12990 (2545853) | 2545853..2546017 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| IUJ40_RS12995 (2546010) | 2546010..2546399 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| IUJ40_RS13000 (2546399) | 2546399..2547865 | - | 1467 | WP_140045528.1 | BppU family phage baseplate upper protein | - |
| IUJ40_RS13005 (2547865) | 2547865..2549775 | - | 1911 | WP_000429558.1 | minor structural protein | - |
| IUJ40_RS13010 (2549791) | 2549791..2550081 | - | 291 | WP_000179858.1 | hypothetical protein | - |
| IUJ40_RS13015 (2550081) | 2550081..2551664 | - | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| IUJ40_RS13020 (2551673) | 2551673..2552497 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| IUJ40_RS13025 (2552497) | 2552497..2558673 | - | 6177 | WP_140045527.1 | phage tail tape measure protein | - |
| IUJ40_RS13030 (2558687) | 2558687..2558845 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| IUJ40_RS13035 (2558887) | 2558887..2559237 | - | 351 | WP_000589167.1 | hypothetical protein | - |
| IUJ40_RS13040 (2559295) | 2559295..2559750 | - | 456 | WP_000169131.1 | Ig-like domain-containing protein | - |
| IUJ40_RS13045 (2559842) | 2559842..2560483 | - | 642 | WP_000807536.1 | phage tail protein | - |
| IUJ40_RS13050 (2560518) | 2560518..2560913 | - | 396 | WP_001023806.1 | DUF3168 domain-containing protein | - |
| IUJ40_RS13055 (2560914) | 2560914..2561315 | - | 402 | WP_000110023.1 | hypothetical protein | - |
| IUJ40_RS13060 (2561312) | 2561312..2561644 | - | 333 | WP_000395502.1 | hypothetical protein | - |
| IUJ40_RS13065 (2561656) | 2561656..2561934 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| IUJ40_RS13070 (2562003) | 2562003..2563166 | - | 1164 | WP_001142734.1 | phage major capsid protein | - |
| IUJ40_RS13075 (2563178) | 2563178..2563951 | - | 774 | WP_000061866.1 | Clp protease ClpP | - |
| IUJ40_RS13080 (2563935) | 2563935..2565173 | - | 1239 | WP_140045526.1 | phage portal protein | - |
| IUJ40_RS13085 (2565178) | 2565178..2566869 | - | 1692 | WP_000153551.1 | terminase large subunit | - |
| IUJ40_RS13090 (2566859) | 2566859..2567164 | - | 306 | WP_000778932.1 | P27 family phage terminase small subunit | - |
| IUJ40_RS13095 (2567292) | 2567292..2567606 | - | 315 | WP_000160689.1 | HNH endonuclease | - |
| IUJ40_RS13100 (2567763) | 2567763..2568200 | - | 438 | WP_000513699.1 | transcriptional regulator | - |
| IUJ40_RS13105 (2568213) | 2568213..2569580 | - | 1368 | WP_015978080.1 | DEAD/DEAH box helicase | - |
| IUJ40_RS13110 (2569561) | 2569561..2569851 | - | 291 | WP_000665205.1 | VRR-NUC domain-containing protein | - |
| IUJ40_RS13115 (2569985) | 2569985..2570089 | + | 105 | WP_015978074.1 | hypothetical protein | - |
| IUJ40_RS13120 (2570192) | 2570192..2572639 | - | 2448 | WP_140045525.1 | virulence-associated E family protein | - |
| IUJ40_RS13125 (2572691) | 2572691..2572891 | - | 201 | WP_000265251.1 | DUF1514 family protein | - |
| IUJ40_RS13130 (2572959) | 2572959..2573111 | - | 153 | WP_031764091.1 | transcriptional activator RinB | - |
| IUJ40_RS13135 (2573104) | 2573104..2573340 | - | 237 | WP_000483477.1 | hypothetical protein | - |
| IUJ40_RS13140 (2573365) | 2573365..2573601 | - | 237 | WP_000195831.1 | DUF1381 domain-containing protein | - |
| IUJ40_RS13145 (2573638) | 2573638..2574180 | - | 543 | WP_000185654.1 | dUTP pyrophosphatase | - |
| IUJ40_RS13150 (2574185) | 2574185..2574421 | - | 237 | WP_001065023.1 | DUF1024 family protein | - |
| IUJ40_RS13155 (2574414) | 2574414..2574722 | - | 309 | WP_031895322.1 | hypothetical protein | - |
| IUJ40_RS13160 (2574719) | 2574719..2575066 | - | 348 | WP_000979209.1 | YopX family protein | - |
| IUJ40_RS13165 (2575063) | 2575063..2575464 | - | 402 | WP_015977708.1 | hypothetical protein | - |
| IUJ40_RS13170 (2575479) | 2575479..2575727 | - | 249 | WP_012068339.1 | SAV1978 family virulence-associated passenger protein | - |
| IUJ40_RS13175 (2575727) | 2575727..2575981 | - | 255 | WP_000022729.1 | DUF3310 domain-containing protein | - |
| IUJ40_RS13180 (2575981) | 2575981..2576382 | - | 402 | WP_000113974.1 | PVL family protein | - |
| IUJ40_RS13185 (2576382) | 2576382..2576567 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| IUJ40_RS13190 (2576580) | 2576580..2578532 | - | 1953 | WP_140045531.1 | DNA polymerase | - |
| IUJ40_RS13195 (2578601) | 2578601..2579158 | - | 558 | WP_000645042.1 | DUF2815 family protein | - |
| IUJ40_RS13200 (2579184) | 2579184..2580350 | - | 1167 | WP_000762534.1 | DUF2800 domain-containing protein | - |
| IUJ40_RS13205 (2580347) | 2580347..2580709 | - | 363 | WP_000985976.1 | hypothetical protein | - |
| IUJ40_RS13210 (2580724) | 2580724..2581047 | - | 324 | WP_000174994.1 | hypothetical protein | - |
| IUJ40_RS13215 (2581126) | 2581126..2581287 | - | 162 | WP_001285963.1 | DUF1270 family protein | - |
| IUJ40_RS13220 (2581300) | 2581300..2581563 | - | 264 | WP_001124190.1 | helix-turn-helix domain-containing protein | - |
| IUJ40_RS13225 (2581588) | 2581588..2581803 | - | 216 | WP_001036302.1 | hypothetical protein | - |
| IUJ40_RS13230 (2581858) | 2581858..2582223 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| IUJ40_RS13235 (2582192) | 2582192..2582437 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| IUJ40_RS13240 (2582493) | 2582493..2582702 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| IUJ40_RS13245 (2582692) | 2582692..2582835 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| IUJ40_RS13250 (2582864) | 2582864..2583640 | - | 777 | WP_140045524.1 | Rha family transcriptional regulator | - |
| IUJ40_RS13255 (2583656) | 2583656..2583874 | - | 219 | WP_001198673.1 | helix-turn-helix transcriptional regulator | - |
| IUJ40_RS13260 (2584016) | 2584016..2584735 | + | 720 | WP_000358224.1 | XRE family transcriptional regulator | - |
| IUJ40_RS13265 (2584805) | 2584805..2584987 | + | 183 | WP_000705240.1 | hypothetical protein | - |
| IUJ40_RS13270 (2585023) | 2585023..2585169 | + | 147 | WP_001013104.1 | hypothetical protein | - |
| IUJ40_RS13275 (2585166) | 2585166..2585780 | - | 615 | WP_000191464.1 | hypothetical protein | - |
| IUJ40_RS13280 (2585906) | 2585906..2587111 | + | 1206 | WP_140045523.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| IUJ40_RS13285 (2587205) | 2587205..2589136 | - | 1932 | Protein_2584 | Lipase 2 | VF |
| IUJ40_RS13290 (2589554) | 2589554..2590867 | + | 1314 | WP_001077722.1 | YjiH family protein | - |
| IUJ40_RS13295 (2590994) | 2590994..2591662 | - | 669 | WP_000936720.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| IUJ40_RS13300 (2591802) | 2591802..2592602 | + | 801 | WP_000667382.1 | MurR/RpiR family transcriptional regulator | - |
| IUJ40_RS13305 (2592880) | 2592880..2593740 | - | 861 | WP_140045522.1 | ROK family protein | - |
| IUJ40_RS13310 (2593898) | 2593898..2594779 | + | 882 | WP_001030738.1 | N-acetylneuraminate lyase | - |
| IUJ40_RS13315 (2594819) | 2594819..2596351 | + | 1533 | WP_000665736.1 | sodium:solute symporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|