MGE detailed information
MGE type: Prophage MGE length: 44011 bp
Accession: NZ_CP064389 Location: 1721430..1765440 Organism: Staphylococcus aureus strain PartE-Saureus-RM8376 Replicon: chromosome
Accession: NZ_CP064389 Location: 1721430..1765440 Organism: Staphylococcus aureus strain PartE-Saureus-RM8376 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUJ40_RS08630 (1717162) | 1717162..1717845 | - | 684 | WP_000789821.1 | heme uptake protein IsdC | - |
| IUJ40_RS08635 (1718054) | 1718054..1719106 | + | 1053 | WP_000160859.1 | LPXTG-anchored heme-scavenging protein IsdA | - |
| IUJ40_RS08640 (1719309) | 1719309..1721246 | + | 1938 | WP_001041586.1 | heme uptake protein IsdB | - |
| IUJ40_RS08645 (1721430) | 1721430..1721813 | - | 384 | WP_001251276.1 | hypothetical protein | - |
| IUJ40_RS08650 (1721800) | 1721800..1722111 | - | 312 | WP_000344116.1 | DUF3467 domain-containing protein | - |
| IUJ40_RS08655 (1722777) | 1722777..1724222 | - | 1446 | WP_001148136.1 | SH3 domain-containing protein | - |
| IUJ40_RS08660 (1724203) | 1724203..1724640 | - | 438 | WP_000354132.1 | phage holin | - |
| IUJ40_RS08665 (1724696) | 1724696..1725091 | - | 396 | WP_000398873.1 | hypothetical protein | - |
| IUJ40_RS08670 (1725096) | 1725096..1726334 | - | 1239 | WP_023487053.1 | BppU family phage baseplate upper protein | - |
| IUJ40_RS08675 (1726347) | 1726347..1728221 | - | 1875 | WP_023487054.1 | Bifunctional autolysin | VF |
| IUJ40_RS08680 (1728358) | 1728358..1728657 | - | 300 | WP_023487055.1 | DUF2951 domain-containing protein | - |
| IUJ40_RS08685 (1728698) | 1728698..1728871 | - | 174 | WP_001790193.1 | XkdX family protein | - |
| IUJ40_RS08690 (1728875) | 1728875..1729252 | - | 378 | WP_000705893.1 | DUF2977 domain-containing protein | - |
| IUJ40_RS08695 (1729252) | 1729252..1731075 | - | 1824 | WP_023487056.1 | BppU family phage baseplate upper protein | - |
| IUJ40_RS08700 (1731075) | 1731075..1732973 | - | 1899 | WP_023487057.1 | hypothetical protein | - |
| IUJ40_RS08705 (1732986) | 1732986..1734872 | - | 1887 | WP_015984523.1 | SGNH/GDSL hydrolase family protein | - |
| IUJ40_RS08710 (1734883) | 1734883..1735824 | - | 942 | WP_140045513.1 | phage tail family protein | - |
| IUJ40_RS08715 (1735839) | 1735839..1738724 | - | 2886 | WP_023487058.1 | phage tape measure protein | - |
| IUJ40_RS08720 (1738728) | 1738728..1739012 | - | 285 | WP_000880587.1 | hypothetical protein | - |
| IUJ40_RS08725 (1739057) | 1739057..1739563 | - | 507 | WP_000134337.1 | tail assembly chaperone | - |
| IUJ40_RS08730 (1739630) | 1739630..1740187 | - | 558 | WP_000057582.1 | tail protein | - |
| IUJ40_RS08735 (1740188) | 1740188..1740613 | - | 426 | WP_000270190.1 | DUF3168 domain-containing protein | - |
| IUJ40_RS08740 (1740626) | 1740626..1741033 | - | 408 | WP_001151323.1 | HK97 gp10 family phage protein | - |
| IUJ40_RS08745 (1741020) | 1741020..1741355 | - | 336 | WP_000483041.1 | phage head closure protein | - |
| IUJ40_RS08750 (1741367) | 1741367..1741717 | - | 351 | WP_023487059.1 | head completion protein | - |
| IUJ40_RS08755 (1741723) | 1741723..1741866 | - | 144 | WP_000002931.1 | hypothetical protein | - |
| IUJ40_RS08760 (1741878) | 1741878..1742792 | - | 915 | WP_000235168.1 | phage major capsid protein | - |
| IUJ40_RS08765 (1742809) | 1742809..1743393 | - | 585 | WP_001019224.1 | DUF4355 domain-containing protein | - |
| IUJ40_RS08770 (1743496) | 1743496..1743696 | - | 201 | WP_033841232.1 | hypothetical protein | - |
| IUJ40_RS08775 (1743698) | 1743698..1744651 | - | 954 | WP_000184130.1 | phage head morphogenesis protein | - |
| IUJ40_RS08780 (1744620) | 1744620..1746044 | - | 1425 | WP_023487061.1 | phage portal protein | - |
| IUJ40_RS08785 (1746041) | 1746041..1747264 | - | 1224 | WP_001037577.1 | PBSX family phage terminase large subunit | - |
| IUJ40_RS08790 (1747257) | 1747257..1747751 | - | 495 | WP_000594088.1 | terminase small subunit | - |
| IUJ40_RS08795 (1748104) | 1748104..1748505 | - | 402 | WP_000286968.1 | hypothetical protein | - |
| IUJ40_RS08800 (1748506) | 1748506..1748679 | - | 174 | WP_047216536.1 | transcriptional activator RinB | - |
| IUJ40_RS08805 (1748672) | 1748672..1748908 | - | 237 | WP_000483477.1 | hypothetical protein | - |
| IUJ40_RS08810 (1748933) | 1748933..1749169 | - | 237 | WP_000195761.1 | DUF1381 domain-containing protein | - |
| IUJ40_RS08815 (1749186) | 1749186..1749359 | - | 174 | WP_001209216.1 | hypothetical protein | - |
| IUJ40_RS08820 (1749396) | 1749396..1749932 | - | 537 | WP_023487063.1 | dUTPase | - |
| IUJ40_RS08825 (1749925) | 1749925..1750095 | - | 171 | WP_001614817.1 | hypothetical protein | - |
| IUJ40_RS08830 (1750082) | 1750082..1750336 | - | 255 | WP_001614814.1 | DUF1024 family protein | - |
| IUJ40_RS08835 (1750329) | 1750329..1750637 | - | 309 | WP_000144710.1 | hypothetical protein | - |
| IUJ40_RS08840 (1750634) | 1750634..1750981 | - | 348 | WP_000979209.1 | YopX family protein | - |
| IUJ40_RS08845 (1750978) | 1750978..1751379 | - | 402 | WP_000695762.1 | hypothetical protein | - |
| IUJ40_RS08850 (1751392) | 1751392..1751640 | - | 249 | WP_012068339.1 | SAV1978 family virulence-associated passenger protein | - |
| IUJ40_RS08855 (1751640) | 1751640..1751894 | - | 255 | WP_000022735.1 | DUF3310 domain-containing protein | - |
| IUJ40_RS08860 (1751980) | 1751980..1752165 | - | 186 | WP_001187230.1 | DUF3113 family protein | - |
| IUJ40_RS08865 (1752165) | 1752165..1752572 | - | 408 | WP_020808008.1 | RusA family crossover junction endodeoxyribonuclease | - |
| IUJ40_RS08870 (1752582) | 1752582..1752803 | - | 222 | WP_001123684.1 | DUF3269 family protein | - |
| IUJ40_RS08875 (1752807) | 1752807..1753022 | - | 216 | WP_001024405.1 | hypothetical protein | - |
| IUJ40_RS08880 (1753019) | 1753019..1754260 | - | 1242 | WP_023180135.1 | DnaB helicase C-terminal domain-containing protein | - |
| IUJ40_RS08885 (1754257) | 1754257..1754613 | - | 357 | WP_001132243.1 | hypothetical protein | - |
| IUJ40_RS08890 (1754613) | 1754613..1755368 | - | 756 | WP_001037657.1 | DnaD domain protein | - |
| IUJ40_RS08895 (1755361) | 1755361..1756035 | - | 675 | WP_015445893.1 | putative HNHc nuclease | - |
| IUJ40_RS08900 (1756036) | 1756036..1756587 | - | 552 | WP_001004506.1 | NUMOD4 domain-containing protein | - |
| IUJ40_RS08905 (1756598) | 1756598..1757023 | - | 426 | WP_000934384.1 | single-stranded DNA-binding protein | - |
| IUJ40_RS08910 (1757023) | 1757023..1757646 | - | 624 | WP_000139720.1 | DUF1071 domain-containing protein | - |
| IUJ40_RS08915 (1757639) | 1757639..1757860 | - | 222 | WP_000815403.1 | DUF2483 family protein | - |
| IUJ40_RS08920 (1757870) | 1757870..1758130 | - | 261 | WP_000291076.1 | hypothetical protein ; Integrase | Integrase |
| IUJ40_RS08925 (1758224) | 1758224..1758385 | - | 162 | WP_000066026.1 | DUF1270 family protein | - |
| IUJ40_RS08930 (1758378) | 1758378..1758515 | - | 138 | WP_000230552.1 | hypothetical protein | - |
| IUJ40_RS08935 (1758565) | 1758565..1758795 | + | 231 | WP_000395455.1 | hypothetical protein | - |
| IUJ40_RS08940 (1758962) | 1758962..1759714 | - | 753 | WP_023487064.1 | phage antirepressor KilAC domain-containing protein | - |
| IUJ40_RS08945 (1759716) | 1759716..1759901 | - | 186 | WP_000933363.1 | helix-turn-helix transcriptional regulator | - |
| IUJ40_RS08950 (1760341) | 1760341..1760550 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| IUJ40_RS08955 (1760540) | 1760540..1760683 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| IUJ40_RS08960 (1760698) | 1760698..1761141 | - | 444 | WP_023487065.1 | hypothetical protein | - |
| IUJ40_RS08965 (1761167) | 1761167..1761943 | - | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| IUJ40_RS08970 (1761957) | 1761957..1762193 | - | 237 | WP_001121027.1 | helix-turn-helix transcriptional regulator | - |
| IUJ40_RS08975 (1762345) | 1762345..1762659 | + | 315 | WP_000333630.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| IUJ40_RS08980 (1762672) | 1762672..1763136 | + | 465 | WP_023487066.1 | toxin-antitoxin system toxin component | Toxin Detail |
| IUJ40_RS08985 (1763168) | 1763168..1763848 | + | 681 | WP_000392109.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| IUJ40_RS08990 (1764055) | 1764055..1765440 | + | 1386 | WP_023487067.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| IUJ40_RS08995 (1765557) | 1765557..1765730 | - | 174 | WP_000290472.1 | 50S ribosomal protein L32 | - |
| IUJ40_RS09000 (1765810) | 1765810..1766367 | - | 558 | WP_000872158.1 | DUF177 domain-containing protein | - |
| IUJ40_RS09005 (1766494) | 1766494..1767633 | + | 1140 | WP_000843611.1 | nucleotidyltransferase | - |
| IUJ40_RS09010 (1767695) | 1767695..1768177 | - | 483 | WP_000401377.1 | pantetheine-phosphate adenylyltransferase | - |
| IUJ40_RS09015 (1768179) | 1768179..1768721 | - | 543 | WP_001263796.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| IUJ40_RS09020 (1768791) | 1768791..1769180 | + | 390 | WP_000814565.1 | hypothetical protein | - |
| IUJ40_RS09025 (1769183) | 1769183..1769437 | - | 255 | WP_001049150.1 | YlbG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|