NZ_CP0643874353436..4508881

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 155446 bp
Accession: NZ_CP064387        Location: 4353436..4508881         Organism: Escherichia coli O104:H4 strain PartB-EcoliO104H4-RM8376       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
IUJ37_RS21455 (4349422) 4349422..4350855 + 1434 WP_000869178.1 bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE -
IUJ37_RS21460 (4350975) 4350975..4351034 - 60 WP_001387082.1 type I toxin-antitoxin system Ibs family toxin -
- (4350935) 4350935..4351076 + 142 NuclAT_6 - -
- (4350935) 4350935..4351076 + 142 NuclAT_6 - -
- (4350935) 4350935..4351076 + 142 NuclAT_6 - -
- (4350935) 4350935..4351076 + 142 NuclAT_6 - -
IUJ37_RS21465 (4351351) 4351351..4351410 - 60 WP_001387081.1 type I toxin-antitoxin system Ibs family toxin -
- (4351311) 4351311..4351452 + 142 NuclAT_1 - -
- (4351311) 4351311..4351452 + 142 NuclAT_1 - -
- (4351311) 4351311..4351452 + 142 NuclAT_1 - -
- (4351311) 4351311..4351452 + 142 NuclAT_1 - -
- (4351311) 4351311..4351452 + 142 NuclAT_7 - -
- (4351311) 4351311..4351452 + 142 NuclAT_7 - -
- (4351311) 4351311..4351452 + 142 NuclAT_7 - -
- (4351311) 4351311..4351452 + 142 NuclAT_7 - -
IUJ37_RS21470 (4351649) 4351649..4353310 - 1662 WP_000341046.1 flotillin family protein -
IUJ37_RS21475 (4353337) 4353337..4353966 - 630 WP_000599947.1 DUF1449 family protein -
IUJ37_RS21480 (4354235) 4354235..4354435 + 201 WP_000350095.1 cell surface composition regulator GlgS -
IUJ37_RS21485 (4354478) 4354478..4355542 - 1065 WP_001269793.1 fimbrial protein -
IUJ37_RS21490 (4355544) 4355544..4356293 - 750 WP_001387080.1 hypothetical protein VF
IUJ37_RS21495 (4356309) 4356309..4358813 - 2505 WP_000277116.1 hypothetical protein VF
IUJ37_RS21500 (4358873) 4358873..4359424 - 552 WP_001272149.1 hypothetical protein VF
IUJ37_RS21505 (4359707) 4359707..4359997 - 291 WP_001297598.1 IS1182 family transposase ISBusp4 Transposase
IUJ37_RS21510 (4360371) 4360371..4361024 + 654 WP_001076997.1 3,4-dihydroxy-2-butanone-4-phosphate synthase -
IUJ37_RS21515 (4361285) 4361285..4361455 + 171 WP_000469266.1 protein YqiD -
IUJ37_RS21520 (4361513) 4361513..4362286 - 774 WP_001295627.1 zinc transporter ZupT -
IUJ37_RS21525 (4362429) 4362429..4363217 + 789 WP_001299419.1 4,5-DOPA dioxygenase extradiol -
IUJ37_RS21530 (4363255) 4363255..4364415 - 1161 WP_000442859.1 glutathionylspermidine synthase family protein -
IUJ37_RS21535 (4364421) 4364421..4365092 - 672 WP_000831543.1 DUF1190 family protein -
IUJ37_RS21540 (4365240) 4365240..4366721 - 1482 WP_000735278.1 outer membrane channel protein TolC -
IUJ37_RS21545 (4366926) 4366926..4367555 + 630 WP_000917117.1 ADP-ribose diphosphatase -
IUJ37_RS21550 (4367556) 4367556..4367978 + 423 WP_000833393.1 DUF1249 family protein -
IUJ37_RS21555 (4368003) 4368003..4368830 + 828 WP_000444747.1 3',5'-cyclic-AMP phosphodiesterase -
IUJ37_RS21560 (4368830) 4368830..4369411 + 582 WP_000105733.1 esterase YqiA -
IUJ37_RS21565 (4369440) 4369440..4371332 + 1893 WP_000195296.1 DNA topoisomerase IV subunit B -
IUJ37_RS21570 (4371380) 4371380..4371694 - 315 WP_000958598.1 putative quinol monooxygenase -
IUJ37_RS21575 (4371725) 4371725..4372306 - 582 WP_000065430.1 NADPH:quinone oxidoreductase MdaB -
IUJ37_RS21580 (4372625) 4372625..4372957 + 333 WP_000912120.1 DUF2645 family protein -
IUJ37_RS21585 (4373003) 4373003..4374352 - 1350 WP_000673354.1 quorum sensing histidine kinase QseC -
IUJ37_RS21590 (4374349) 4374349..4375008 - 660 WP_001221502.1 Regulator of RpoS VF
IUJ37_RS21595 (4375160) 4375160..4375552 + 393 WP_000712658.1 OB fold stress tolerance protein YgiW -
IUJ37_RS21600 (4375605) 4375605..4376087 + 483 WP_000183494.1 GyrI-like domain-containing protein -
IUJ37_RS21605 (4376633) 4376633..4378891 + 2259 WP_001281881.1 DNA topoisomerase IV subunit A -
IUJ37_RS21610 (4379124) 4379124..4379861 + 738 WP_000965703.1 1-acylglycerol-3-phosphate O-acyltransferase -
IUJ37_RS21615 (4379936) 4379936..4381348 + 1413 WP_000059395.1 cell division protein FtsP -
IUJ37_RS21620 (4381459) 4381459..4383678 + 2220 WP_000095187.1 YgiQ family radical SAM protein -
IUJ37_RS21625 (4383721) 4383721..4383978 - 258 WP_000848528.1 lipoprotein YqhH -
IUJ37_RS21630 (4384029) 4384029..4384955 - 927 WP_000691598.1 YbjP/YqhG family protein -
IUJ37_RS21635 (4385155) 4385155..4385982 - 828 WP_000013149.1 2,5-didehydrogluconate reductase DkgA -
IUJ37_RS21640 (4386087) 4386087..4387250 - 1164 WP_001058807.1 alcohol dehydrogenase -
IUJ37_RS21645 (4387444) 4387444..4388343 + 900 WP_024174618.1 DNA-binding transcriptional regulator YqhC -
IUJ37_RS21650 (4388383) 4388383..4389042 - 660 WP_000268419.1 DedA family general envelope maintenance protein YghB -
IUJ37_RS21655 (4389182) 4389182..4390369 - 1188 WP_001315867.1 cystathionine beta-lyase -
IUJ37_RS21660 (4390621) 4390621..4391355 + 735 WP_000527844.1 tol-pal system-associated acyl-CoA thioesterase -
IUJ37_RS21665 (4391362) 4391362..4391787 + 426 WP_001240712.1 TonB system transport protein ExbD -
IUJ37_RS21670 (4391826) 4391826..4392710 - 885 WP_000018758.1 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase VF
IUJ37_RS21675 (4392901) 4392901..4393395 + 495 WP_000439331.1 TIGR00645 family protein -
IUJ37_RS21680 (4393435) 4393435..4394475 - 1041 WP_000262151.1 L-glyceraldehyde 3-phosphate reductase -
IUJ37_RS21685 (4394632) 4394632..4395519 + 888 WP_001297303.1 YghX family hydrolase -
IUJ37_RS21690 (4395638) 4395638..4395925 + 288 WP_001059136.1 DUF2623 family protein YghW -
IUJ37_RS21695 (4396114) 4396114..4397232 + 1119 WP_000145410.1 hydrogenase 2 small subunit -
IUJ37_RS21700 (4397235) 4397235..4398221 + 987 WP_001081870.1 hydrogenase 2 operon protein HybA -
IUJ37_RS21705 (4398211) 4398211..4399389 + 1179 WP_000017703.1 Ni/Fe-hydrogenase cytochrome b subunit -
IUJ37_RS21710 (4399386) 4399386..4401089 + 1704 WP_000083065.1 hydrogenase 2 large subunit -
IUJ37_RS21715 (4401089) 4401089..4401583 + 495 WP_001221953.1 HyaD/HybD family hydrogenase maturation endopeptidase -
IUJ37_RS21720 (4401576) 4401576..4402064 + 489 WP_000134014.1 hydrogenase-2 assembly chaperone -
IUJ37_RS21725 (4402057) 4402057..4402398 + 342 WP_000544953.1 hydrogenase maturation nickel metallochaperone HypA -
IUJ37_RS21730 (4402411) 4402411..4402659 + 249 WP_000334896.1 hydrogenase maturation factor HybG -
IUJ37_RS21735 (4402781) 4402781..4403761 - 981 WP_000399648.1 IS110 family transposase IS621 Transposase
IUJ37_RS21740 (4404061) 4404061..4404927 - 867 WP_001387074.1 glutathione-dependent disulfide-bond oxidoreductase -
IUJ37_RS21745 (4405132) 4405132..4406991 + 1860 WP_001297309.1 bifunctional glutathionylspermidine amidase/synthase -
IUJ37_RS21750 (4407283) 4407283..4408782 + 1500 WP_000933258.1 inorganic phosphate transporter PitB -
IUJ37_RS21755 (4408831) 4408831..4409523 - 693 WP_001190780.1 dTMP kinase -
IUJ37_RS21760 (4409697) 4409697..4410410 + 714 WP_001076097.1 dTMP kinase -
IUJ37_RS21765 (4410442) 4410442..4411200 + 759 WP_000339532.1 hypothetical protein -
IUJ37_RS21770 (4411246) 4411246..4412595 + 1350 WP_000896880.1 lipopolysaccharide biosynthesis protein -
IUJ37_RS21775 (4412595) 4412595..4413419 + 825 WP_000984978.1 hypothetical protein -
IUJ37_RS21780 (4413431) 4413431..4413991 + 561 WP_001299422.1 YtfJ family protein -
IUJ37_RS21785 (4414022) 4414022..4415092 + 1071 WP_000779661.1 LPS export ABC transporter permease LptF -
IUJ37_RS21790 (4415089) 4415089..4416168 + 1080 WP_001387073.1 LPS export ABC transporter permease LptG -
IUJ37_RS21795 (4416203) 4416203..4417375 - 1173 WP_000524972.1 8-amino-7-oxononanoate synthase VF
IUJ37_RS21800 (4417375) 4417375..4417623 - 249 WP_000248097.1 acyl carrier protein -
IUJ37_RS21805 (4417655) 4417655..4418569 - 915 WP_001077177.1 NAD-dependent epimerase/dehydratase family protein -
IUJ37_RS21810 (4418566) 4418566..4420287 - 1722 WP_001390306.1 2-succinylbenzoate--CoA ligase VF
IUJ37_RS21815 (4420658) 4420658..4421800 + 1143 WP_000388786.1 protein YghO -
IUJ37_RS21820 (4421807) 4421807..4422571 - 765 WP_001297764.1 transcriptional regulator GlcC -
IUJ37_RS21825 (4422822) 4422822..4424321 + 1500 WP_000026117.1 glycolate oxidase subunit GlcD -
IUJ37_RS21830 (4424321) 4424321..4425373 + 1053 WP_000943059.1 glycolate oxidase subunit GlcE -
IUJ37_RS21835 (4425384) 4425384..4426607 + 1224 WP_001194680.1 glycolate oxidase subunit GlcF -
IUJ37_RS21840 (4426612) 4426612..4427016 + 405 WP_000853256.1 GlcG family protein -
IUJ37_RS21845 (4427038) 4427038..4429209 + 2172 WP_000084080.1 malate synthase G -
IUJ37_RS21850 (4429565) 4429565..4431247 + 1683 WP_000259303.1 glycolate permease GlcA -
IUJ37_RS21855 (4431733) 4431733..4436298 + 4566 WP_001034494.1 hypothetical protein VF
IUJ37_RS21860 (4436438) 4436438..4437247 + 810 WP_001365924.1 hypothetical protein VF
IUJ37_RS21865 (4437313) 4437313..4437723 + 411 WP_001324279.1 type II secretion system pilot lipoprotein GspS-beta -
IUJ37_RS21870 (4437741) 4437741..4438700 + 960 WP_000135063.1 hypothetical protein VF
IUJ37_RS21875 (4438730) 4438730..4440790 + 2061 WP_000498829.1 hypothetical protein VF
IUJ37_RS21880 (4440790) 4440790..4442283 + 1494 WP_000249348.1 hypothetical protein VF
IUJ37_RS21885 (4442283) 4442283..4443506 + 1224 WP_001173453.1 hypothetical protein VF
IUJ37_RS21890 (4443523) 4443523..4443978 + 456 WP_001087296.1 hypothetical protein VF
IUJ37_RS21895 (4443982) 4443982..4444545 + 564 WP_001115140.1 hypothetical protein VF
IUJ37_RS21900 (4444542) 4444542..4444913 + 372 WP_000820125.1 hypothetical protein VF
IUJ37_RS21905 (4444910) 4444910..4445509 + 600 WP_001255040.1 hypothetical protein VF
IUJ37_RS21910 (4445512) 4445512..4446489 + 978 WP_000633238.1 hypothetical protein VF
IUJ37_RS21915 (4446486) 4446486..4447664 + 1179 WP_000094962.1 hypothetical protein VF
IUJ37_RS21920 (4447666) 4447666..4448202 + 537 WP_000942795.1 hypothetical protein VF
IUJ37_RS21925 (4448483) 4448483..4449325 - 843 WP_001280493.1 DUF4942 domain-containing protein -
IUJ37_RS21930 (4449410) 4449410..4449607 - 198 WP_085949090.1 DUF957 domain-containing protein -
IUJ37_RS21935 (4449635) 4449635..4449832 - 198 Protein_4290 DUF5983 family protein -
IUJ37_RS21940 (4449829) 4449829..4450206 - 378 WP_001094429.1 TA system toxin CbtA family protein Toxin Detail
IUJ37_RS21945 (4450253) 4450253..4450630 - 378 WP_001285616.1 type IV toxin-antitoxin system YeeU family antitoxin Antitoxin Detail
IUJ37_RS21950 (4450710) 4450710..4450931 - 222 WP_000692350.1 DUF987 domain-containing protein -
IUJ37_RS21955 (4451018) 4451018..4451494 - 477 WP_001388380.1 RadC family protein -
IUJ37_RS21960 (4451510) 4451510..4451983 - 474 WP_000855081.1 antirestriction protein -
IUJ37_RS21965 (4452285) 4452285..4453103 - 819 WP_001234603.1 DUF932 domain-containing protein -
IUJ37_RS21970 (4453203) 4453203..4453436 - 234 WP_001119729.1 DUF905 family protein -
IUJ37_RS21975 (4453515) 4453515..4453970 - 456 WP_000581502.1 IrmA family protein -
IUJ37_RS21980 (4454046) 4454046..4456562 - 2517 WP_001387066.1 membrane protein -
IUJ37_RS21985 (4456683) 4456683..4459802 - 3120 WP_000820379.1 autotransporter adhesin Ag43 -
IUJ37_RS21990 (4460136) 4460136..4461008 - 873 WP_001069724.1 GTPase family protein -
IUJ37_RS21995 (4461118) 4461118..4462137 - 1020 WP_001388379.1 hypothetical protein -
IUJ37_RS22000 (4463316) 4463316..4463423 - 108 Protein_4303 IS1 family transposase -
IUJ37_RS22005 (4463632) 4463632..4464204 - 573 WP_001170560.1 hypothetical protein -
IUJ37_RS22010 (4464290) 4464290..4464496 - 207 WP_001095912.1 AlpA family transcriptional regulator -
IUJ37_RS22015 (4465195) 4465195..4465407 + 213 WP_000453331.1 hemolysin expression modulator Hha -
IUJ37_RS22020 (4465647) 4465647..4465820 - 174 WP_001387062.1 hypothetical protein -
IUJ37_RS22025 (4466024) 4466024..4466593 + 570 WP_000220727.1 inovirus Gp2 family protein -
IUJ37_RS22030 (4466631) 4466631..4466789 + 159 WP_000493525.1 hypothetical protein -
IUJ37_RS22035 (4466761) 4466761..4467144 + 384 WP_000271022.1 putative zinc ribbon protein -
IUJ37_RS22040 (4467141) 4467141..4467553 + 413 Protein_4311 putative zinc ribbon protein -
IUJ37_RS22045 (4467559) 4467559..4467741 + 183 WP_001216313.1 hypothetical protein -
IUJ37_RS22050 (4467862) 4467862..4468485 + 624 WP_001260266.1 hypothetical protein -
IUJ37_RS22055 (4468581) 4468581..4468814 + 234 WP_000124181.1 hypothetical protein -
IUJ37_RS22060 (4468867) 4468867..4469058 - 192 WP_001287796.1 DUF4222 domain-containing protein -
IUJ37_RS22065 (4469565) 4469565..4470062 + 498 WP_000098939.1 hypothetical protein VF
IUJ37_RS22070 (4470084) 4470084..4471445 + 1362 WP_000930193.1 hypothetical protein VF
IUJ37_RS22075 (4471547) 4471547..4472791 + 1245 WP_000897032.1 GIY-YIG nuclease family protein -
IUJ37_RS22080 (4473027) 4473027..4474772 + 1746 WP_001390303.1 NERD domain-containing protein/DEAD/DEAH box helicase -
IUJ37_RS22085 (4474837) 4474837..4475142 + 306 WP_001420595.1 hypothetical protein -
IUJ37_RS22090 (4475257) 4475257..4475424 + 168 Protein_4321 transcriptional regulator -
IUJ37_RS22095 (4475503) 4475503..4475772 + 270 WP_000226517.1 PerC family transcriptional regulator -
IUJ37_RS22100 (4475793) 4475793..4476437 + 645 WP_001387055.1 hypothetical protein -
IUJ37_RS22105 (4476503) 4476503..4476826 + 324 WP_001387054.1 hypothetical protein -
IUJ37_RS22110 (4476857) 4476857..4477436 - 580 Protein_4325 integrase core domain-containing protein -
IUJ37_RS22115 (4477432) 4477432..4478114 + 683 Protein_4326 hypothetical protein -
IUJ37_RS22120 (4478141) 4478141..4479157 - 1017 Protein_4327 IS630 family transposase -
IUJ37_RS22125 (4479553) 4479553..4480029 + 477 WP_000072549.1 hypothetical protein VF
IUJ37_RS22130 (4480032) 4480032..4481510 + 1479 WP_000215053.1 hypothetical protein VF
IUJ37_RS22135 (4481520) 4481520..4482026 + 507 WP_000233190.1 type VI secretion system protein AaiC/Hcp2 -
IUJ37_RS22140 (4482036) 4482036..4482458 + 423 WP_000555547.1 hypothetical protein -
IUJ37_RS22145 (4482451) 4482451..4484253 + 1803 WP_001390300.1 type VI secretion system baseplate subunit TssF -
IUJ37_RS22150 (4484244) 4484244..4485176 + 933 WP_001173975.1 type VI secretion system baseplate subunit TssG -
IUJ37_RS22155 (4485189) 4485189..4487171 + 1983 WP_000198270.1 type VI secretion system tip protein TssI/VgrG -
IUJ37_RS22160 (4487182) 4487182..4487649 + 468 WP_000005080.1 hypothetical protein -
IUJ37_RS22165 (4487659) 4487659..4487958 + 300 WP_001390299.1 PAAR domain-containing protein -
IUJ37_RS22170 (4487962) 4487962..4489038 + 1077 WP_001033155.1 hypothetical protein VF
IUJ37_RS22175 (4489046) 4489046..4489597 + 552 WP_000152746.1 type VI secretion lipoprotein TssJ -
IUJ37_RS22180 (4489616) 4489616..4491028 + 1413 WP_001154665.1 type VI secretion system baseplate subunit TssK -
IUJ37_RS22185 (4491367) 4491367..4491957 + 591 WP_001028113.1 hypothetical protein VF
IUJ37_RS22190 (4491963) 4491963..4495367 + 3405 WP_000914956.1 type VI secretion protein IcmF/TssM N-terminal domain-containing protein -
IUJ37_RS22195 (4495371) 4495371..4497920 + 2550 WP_000029846.1 hypothetical protein VF
IUJ37_RS22200 (4498117) 4498117..4499328 + 1212 Protein_4343 IS3 family transposase -
IUJ37_RS22205 (4499721) 4499721..4499914 + 194 Protein_4344 hypothetical protein -
IUJ37_RS22210 (4501086) 4501086..4501652 + 567 WP_000587872.1 hypothetical protein -
IUJ37_RS22215 (4501717) 4501717..4501997 + 281 Protein_4346 transposase -
IUJ37_RS22220 (4502131) 4502131..4503285 + 1155 WP_000359994.1 VasL domain-containing protein -
IUJ37_RS22225 (4504151) 4504151..4504321 - 171 Protein_4348 ATP-dependent helicase -
IUJ37_RS22230 (4504351) 4504351..4504539 - 189 Protein_4349 IS66 family transposase IS682 Transposase
IUJ37_RS22235 (4504600) 4504600..4505631 + 1032 Protein_4350 IS110 family transposase ISEc45 Transposase
IUJ37_RS22240 (4505716) 4505716..4506282 + 567 Protein_4351 IS3 family transposase -
IUJ37_RS22245 (4506503) 4506503..4507483 - 981 WP_000019440.1 IS5 family transposase ISKpn26 Transposase
IUJ37_RS22250 (4507667) 4507667..4509280 - 1614 WP_000080172.1 IS66-like element ISEc43 family transposase -
IUJ37_RS22255 (4509311) 4509311..4509661 - 351 WP_000624688.1 IS66 family insertion sequence element accessory protein TnpB -
IUJ37_RS22260 (4509658) 4509658..4510092 - 435 WP_001309734.1 transposase -
IUJ37_RS22265 (4510180) 4510180..4510632 + 453 Protein_4356 transposase -
IUJ37_RS22270 (4510671) 4510671..4510913 + 243 Protein_4357 IS256 family transposase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance