MGE detailed information
MGE type: Prophage MGE length: 60326 bp
Accession: NZ_CP064387 Location: 1343376..1403701 Organism: Escherichia coli O104:H4 strain PartB-EcoliO104H4-RM8376 Replicon: chromosome
Accession: NZ_CP064387 Location: 1343376..1403701 Organism: Escherichia coli O104:H4 strain PartB-EcoliO104H4-RM8376 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUJ37_RS06785 (1338986) | 1338986..1339627 | + | 642 | WP_001297479.1 | high frequency lysogenization protein HflD | - |
| IUJ37_RS06790 (1339631) | 1339631..1341001 | + | 1371 | WP_000423729.1 | adenylosuccinate lyase | - |
| IUJ37_RS06795 (1341169) | 1341169..1341840 | + | 672 | WP_001265481.1 | two-component system response regulator PhoP | - |
| IUJ37_RS06800 (1341840) | 1341840..1343300 | + | 1461 | WP_000735412.1 | two-component system sensor histidine kinase PhoQ | - |
| IUJ37_RS06805 (1343376) | 1343376..1344497 | + | 1122 | WP_001295435.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| IUJ37_RS06810 (1344643) | 1344643..1345872 | - | 1230 | WP_000359463.1 | peptidase T | - |
| IUJ37_RS06815 (1346122) | 1346122..1347258 | + | 1137 | WP_000531594.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| IUJ37_RS06820 (1347242) | 1347242..1348105 | + | 864 | WP_000799406.1 | spermidine/putrescine ABC transporter permease PotB | - |
| IUJ37_RS06825 (1348337) | 1348337..1348918 | - | 582 | WP_000885609.1 | tail fiber assembly protein | - |
| IUJ37_RS06830 (1348918) | 1348918..1351710 | - | 2793 | WP_000279201.1 | phage tail protein | - |
| IUJ37_RS06835 (1351775) | 1351775..1352374 | - | 600 | WP_001233150.1 | hypothetical protein | VF |
| IUJ37_RS06840 (1352442) | 1352442..1355915 | - | 3474 | WP_000515046.1 | host specificity protein J | - |
| IUJ37_RS06845 (1356156) | 1356156..1356737 | - | 582 | WP_001089988.1 | tail assembly protein | - |
| IUJ37_RS06850 (1356734) | 1356734..1357477 | - | 744 | WP_000194711.1 | C40 family peptidase | - |
| IUJ37_RS06855 (1357488) | 1357488..1358186 | - | 699 | WP_001335877.1 | phage minor tail protein L | - |
| IUJ37_RS06860 (1358186) | 1358186..1358515 | - | 330 | WP_000847306.1 | phage tail protein | - |
| IUJ37_RS06865 (1358512) | 1358512..1361124 | - | 2613 | WP_000081807.1 | phage tail tape measure protein | - |
| IUJ37_RS06870 (1361105) | 1361105..1361518 | - | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| IUJ37_RS06875 (1361545) | 1361545..1361967 | - | 423 | WP_000479049.1 | phage minor tail protein G | - |
| IUJ37_RS06880 (1361981) | 1361981..1362733 | - | 753 | WP_000235035.1 | phage tail protein | - |
| IUJ37_RS06885 (1362741) | 1362741..1363136 | - | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| IUJ37_RS06890 (1363133) | 1363133..1363708 | - | 576 | WP_000975003.1 | phage tail protein | - |
| IUJ37_RS06895 (1363724) | 1363724..1364077 | - | 354 | WP_001204567.1 | head-tail joining protein | - |
| IUJ37_RS06900 (1364070) | 1364070..1364438 | - | 369 | WP_001390684.1 | DNA-packaging protein FI | - |
| IUJ37_RS06905 (1364491) | 1364491..1365519 | - | 1029 | WP_000522644.1 | major capsid protein | - |
| IUJ37_RS06910 (1365577) | 1365577..1365924 | - | 348 | WP_000256795.1 | head decoration protein | - |
| IUJ37_RS06915 (1365961) | 1365961..1367466 | - | 1506 | WP_001254006.1 | S49 family peptidase | - |
| IUJ37_RS06920 (1367456) | 1367456..1369048 | - | 1593 | WP_012601424.1 | phage portal protein | - |
| IUJ37_RS06925 (1369045) | 1369045..1369251 | - | 207 | WP_000259002.1 | gpW family head-tail joining protein | - |
| IUJ37_RS06930 (1369235) | 1369235..1371163 | - | 1929 | WP_001402639.1 | phage terminase large subunit family protein | - |
| IUJ37_RS06935 (1371135) | 1371135..1371644 | - | 510 | WP_000235436.1 | terminase small subunit | - |
| IUJ37_RS06940 (1372046) | 1372046..1372231 | + | 186 | WP_001329960.1 | YlcI/YnfO family protein | - |
| IUJ37_RS06945 (1372364) | 1372364..1372504 | - | 141 | WP_000347013.1 | hypothetical protein | - |
| IUJ37_RS06950 (1372855) | 1372855..1373322 | - | 468 | WP_001082546.1 | lysis protein | - |
| IUJ37_RS06955 (1373621) | 1373621..1374154 | - | 534 | WP_001092864.1 | lysozyme | - |
| IUJ37_RS06960 (1374668) | 1374668..1375003 | - | 336 | Protein_1371 | YdfR family protein | - |
| IUJ37_RS06965 (1375008) | 1375008..1375223 | - | 216 | WP_000284510.1 | class II holin family protein | - |
| IUJ37_RS06970 (1375374) | 1375374..1377227 | - | 1854 | WP_021519714.1 | SASA family carbohydrate esterase | - |
| IUJ37_RS06975 (1377497) | 1377497..1377613 | + | 117 | Protein_1374 | hypothetical protein | - |
| IUJ37_RS06995 (1378017) | 1378017..1379066 | - | 1050 | WP_000935531.1 | site-specific DNA-methyltransferase | - |
| IUJ37_RS07000 (1379217) | 1379217..1379414 | - | 198 | WP_000917749.1 | hypothetical protein | - |
| IUJ37_RS07005 (1379641) | 1379641..1380462 | - | 822 | WP_000762898.1 | antitermination protein | - |
| IUJ37_RS07010 (1380459) | 1380459..1380833 | - | 375 | WP_000904113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| IUJ37_RS07015 (1380846) | 1380846..1381895 | - | 1050 | WP_001265094.1 | DUF968 domain-containing protein | - |
| IUJ37_RS07020 (1381897) | 1381897..1382175 | - | 279 | WP_001341382.1 | hypothetical protein | - |
| IUJ37_RS07025 (1382343) | 1382343..1382498 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| IUJ37_RS07030 (1383107) | 1383107..1383423 | - | 317 | Protein_1382 | hypothetical protein | - |
| IUJ37_RS07035 (1383420) | 1383420..1383596 | - | 177 | WP_000753058.1 | hypothetical protein | - |
| IUJ37_RS07040 (1383589) | 1383589..1383771 | - | 183 | WP_001224662.1 | hypothetical protein | - |
| IUJ37_RS07045 (1383865) | 1383865..1384221 | - | 357 | WP_000403778.1 | hypothetical protein | - |
| IUJ37_RS07050 (1384199) | 1384199..1384342 | - | 144 | WP_000207966.1 | hypothetical protein | - |
| IUJ37_RS07055 (1384353) | 1384353..1384616 | - | 264 | WP_000224227.1 | hypothetical protein | - |
| IUJ37_RS07060 (1384750) | 1384750..1385025 | - | 276 | Protein_1388 | hypothetical protein | - |
| IUJ37_RS07065 (1385359) | 1385359..1385537 | - | 179 | Protein_1389 | hypothetical protein | - |
| IUJ37_RS07070 (1385539) | 1385539..1386288 | - | 750 | WP_001289900.1 | ead/Ea22-like family protein | - |
| IUJ37_RS07075 (1386285) | 1386285..1386971 | - | 687 | WP_000034251.1 | ead/Ea22-like family protein | - |
| IUJ37_RS07080 (1386958) | 1386958..1387452 | - | 495 | WP_001275731.1 | class I SAM-dependent methyltransferase | - |
| IUJ37_RS07085 (1387449) | 1387449..1387871 | - | 423 | WP_000416574.1 | DUF977 family protein | - |
| IUJ37_RS07090 (1387912) | 1387912..1388874 | - | 963 | WP_000095671.1 | helix-turn-helix domain-containing protein | - |
| IUJ37_RS07095 (1388897) | 1388897..1389322 | - | 426 | WP_000693845.1 | toxin YdaT family protein | - |
| IUJ37_RS07100 (1389306) | 1389306..1389581 | - | 276 | WP_001048458.1 | helix-turn-helix transcriptional regulator | - |
| IUJ37_RS07105 (1389689) | 1389689..1390189 | + | 501 | WP_000824162.1 | helix-turn-helix transcriptional regulator | - |
| IUJ37_RS07110 (1390207) | 1390207..1390398 | + | 192 | WP_000100896.1 | hypothetical protein | Antitoxin Detail |
| IUJ37_RS07115 (1390398) | 1390398..1390688 | + | 291 | WP_014966210.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IUJ37_RS07120 (1390958) | 1390958..1391110 | + | 153 | WP_000379548.1 | DUF1391 family protein | - |
| IUJ37_RS07125 (1391122) | 1391122..1391460 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| IUJ37_RS07130 (1391449) | 1391449..1391643 | - | 195 | WP_001295058.1 | hypothetical protein | - |
| IUJ37_RS07135 (1392210) | 1392210..1392398 | + | 189 | WP_000449175.1 | cell division inhibition protein DicB | - |
| IUJ37_RS07140 (1392395) | 1392395..1392583 | + | 189 | WP_000199475.1 | DUF1482 family protein | - |
| IUJ37_RS07145 (1392676) | 1392676..1395114 | + | 2439 | WP_000102130.1 | exonuclease | - |
| IUJ37_RS07150 (1395176) | 1395176..1395445 | + | 270 | WP_000003742.1 | excisionase | - |
| IUJ37_RS07155 (1395414) | 1395414..1396532 | + | 1119 | WP_000074983.1 | hypothetical protein ; Integrase | Integrase |
| IUJ37_RS07160 (1396699) | 1396699..1397493 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| IUJ37_RS07165 (1397490) | 1397490..1398536 | + | 1047 | WP_000759309.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| IUJ37_RS07170 (1398594) | 1398594..1399055 | + | 462 | WP_000076381.1 | DUF3592 domain-containing protein | - |
| IUJ37_RS07175 (1399052) | 1399052..1399840 | + | 789 | WP_000713472.1 | TPM domain-containing protein | - |
| IUJ37_RS07180 (1399979) | 1399979..1400800 | - | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| IUJ37_RS07185 (1400816) | 1400816..1401727 | - | 912 | WP_000291270.1 | N-acetylglucosamine kinase | - |
| IUJ37_RS07190 (1401756) | 1401756..1403000 | - | 1245 | WP_001251389.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| IUJ37_RS07195 (1403000) | 1403000..1403701 | - | 702 | WP_001033695.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| IUJ37_RS07200 (1403694) | 1403694..1404893 | - | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| IUJ37_RS07205 (1405155) | 1405155..1406228 | + | 1074 | WP_000810253.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|