MGE detailed information
MGE type: Genomic_island MGE length: 12975 bp
Accession: NZ_CP064376 Location: 2825996..2838970 Organism: Shigella sonnei strain PartP-Ssonnei-RM8376 Replicon: chromosome
Accession: NZ_CP064376 Location: 2825996..2838970 Organism: Shigella sonnei strain PartP-Ssonnei-RM8376 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUJ51_RS14525 (2821145) | 2821145..2822200 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| IUJ51_RS14530 (2822271) | 2822271..2823056 | - | 786 | WP_000207568.1 | putative lateral flagellar export/assembly protein LafU | - |
| IUJ51_RS14535 (2823028) | 2823028..2824740 | + | 1713 | Protein_2838 | flagellar biosynthesis protein FlhA | - |
| IUJ51_RS14540 (2824863) | 2824863..2825360 | - | 498 | WP_000006258.1 | REP-associated tyrosine transposase RayT | - |
| IUJ51_RS14545 (2825431) | 2825431..2825559 | - | 129 | Protein_2840 | ISAs1 family transposase | - |
| IUJ51_RS14550 (2825614) | 2825614..2826320 | + | 707 | WP_237163091.1 | IS1-like element IS1A family transposase | - |
| IUJ51_RS14555 (2826609) | 2826609..2827382 | - | 774 | WP_127148796.1 | hypothetical protein | VF |
| IUJ51_RS14560 (2827568) | 2827568..2827828 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| IUJ51_RS14565 (2827831) | 2827831..2828109 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| IUJ51_RS14570 (2828265) | 2828265..2829005 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| IUJ51_RS14575 (2828976) | 2828976..2829743 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| IUJ51_RS14580 (2829949) | 2829949..2830527 | - | 579 | WP_000284050.1 | hypothetical protein | VF |
| IUJ51_RS14585 (2830767) | 2830767..2833211 | + | 2445 | WP_000973074.1 | hypothetical protein | VF |
| IUJ51_RS14590 (2833254) | 2833254..2833700 | - | 447 | WP_005141527.1 | Ivy family C-type lysozyme inhibitor | - |
| IUJ51_RS14595 (2833881) | 2833881..2834651 | + | 771 | WP_001118061.1 | 2-oxoglutaramate amidase | - |
| IUJ51_RS14600 (2834693) | 2834693..2835829 | - | 1137 | WP_000420787.1 | ISAs1 family transposase ISEc1 | Transposase |
| IUJ51_RS14605 (2836298) | 2836298..2836675 | - | 378 | WP_001077737.1 | hypothetical protein | - |
| IUJ51_RS14610 (2836675) | 2836675..2837085 | - | 411 | WP_162772774.1 | hypothetical protein | - |
| IUJ51_RS14615 (2837123) | 2837123..2838259 | - | 1137 | Protein_2854 | ISAs1 family transposase ISEc1 | Transposase |
| IUJ51_RS14620 (2838521) | 2838521..2838970 | - | 450 | WP_005141515.1 | RHS element protein dsORF-h1 | - |
| IUJ51_RS14625 (2838982) | 2838982..2843199 | - | 4218 | WP_140046287.1 | RHS element core protein | - |
| IUJ51_RS14630 (2843275) | 2843275..2843823 | - | 549 | Protein_2857 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|